prot_M-pyrifera_M_contig1144.3004.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1144.3004.1
Unique Nameprot_M-pyrifera_M_contig1144.3004.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length445
Homology
BLAST of mRNA_M-pyrifera_M_contig1144.3004.1 vs. uniprot
Match: D7FNQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ8_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 2.580e-127
Identity = 258/472 (54.66%), Postives = 296/472 (62.71%), Query Frame = 0
Query:    1 GVFFVLATKAISVPPVCAGCRLGWGRRVHTLGEDGSGGGXXXXSCGRDQEGDSYLE---GGKFYGNARKE-----RAPLGGGSSPHTSSADGEGXXXXXXXXXXXXPGGVN-----GTFPKKTTKLALPARHWMCTVCKKVNGFPEEWDGRAGKAVEVVIKRKKVDTQAMYGAFKTKLAVPTCVKCQAPFNYSWRNG------------RRDDGVLVRADGHGNTLGLSRSPPRPTTSASTCGTDDTTAGGSPEAPSRPRMLVKMAGSIRKFV--LHPREVSPSEATGQRGVVDDSTDPELWYGNEFRRQLKTYFNPELERPSLSLRGGRYSIGARVACFAGRDTWYPGAVTTSRENNTYDVRYDNGDIAQHVFPHMIRFEPTHSDSELLCCYYGLALVAAATWPLMGAWYFSTSTXXXXXXXXXXXVGAVIAVPALIVGAAGTVAVVLQFGAIYRENKSTGLRMMVKYAVV 445
            GVFF LATKA+SVP  C G RL   RRVH L +D +   XXXX     ++ ++ LE   GGK  G   +E     RAPLGG S           XXXXXXXXXXXX    N     GT  +K T+L LP RHWMCTVCKKVN  P+EW+GRAGK V VVIKRK VDT+AMYG FKTK  VP C KC+ PFNYSWRNG            R  D  L R     +T   + S   P  SA+  G  D   GG   A    R+L K A  IR        R  + S+    RG  D   +PELWYG EFRRQL TYF PEL RP+    G RY +GARVACFAG+D WYPGAV  SREN+TYDVRYDNGDIAQHVF HMIRFEP H+DS L CCYYGLAL AAA WPL G+WYFS+++  XXXXXXXXX    +A+PAL+VG AGT+AV  QF  IY +N+STGL +  K+A V
Sbjct:   55 GVFFFLATKAVSVPAFCGGGRL-CERRVHALKDDATSTDXXXXXXXXXRDNEAALERGGGGKTIGGDAQEEGDLQRAPLGGSSGRRXXXXXXXXXXXXXXXXXXXXXXSANRLADGGT--RKRTELDLPPRHWMCTVCKKVNMLPDEWNGRAGKDVHVVIKRKAVDTRAMYGLFKTKPGVPLCSKCRTPFNYSWRNGGGSDNLMQQRQQRLLDAALSRPTNAASTAVAAGSATDPALSAAVDGPMDAENGGVAAAAVHRRVLAKAARFIRALCSPCRRRRAASSKPFDGRGGSDAVEEPELWYGREFRRQLMTYFKPELSRPAAG--GERYPVGARVACFAGKDAWYPGAVAASRENDTYDVRYDNGDIAQHVFSHMIRFEPVHADSRLTCCYYGLALAAAAAWPLAGSWYFSSTSAAXXXXXXXXXX---VALPALVVGTAGTLAVAFQFWEIYADNRSTGLCVATKFAAV 518          
BLAST of mRNA_M-pyrifera_M_contig1144.3004.1 vs. uniprot
Match: A0A6H5L3X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X8_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 6.970e-105
Identity = 179/329 (54.41%), Postives = 207/329 (62.92%), Query Frame = 0
Query:  131 FPEEWDGRAGKAVEVVIKRKKVDTQAMYGAFKTKLAVPTCVKCQAPFNYSWRNG------------RRDDGVLVRADGHGNTLGLSRSPPRPTTSASTCGTDDTTAGGSPEAPSRPRMLVKMAGSIRKFV--LHPREVSPSEATGQRGVVDDSTDPELWYGNEFRRQLKTYFNPELERPSLSLRGGRYSIGARVACFAGRDTWYPGAVTTSRENNTYDVRYDNGDIAQHVFPHMIRFEPTHSDSELLCCYYGLALVAAATWPLMGAWYFSTSTXXXXXXXXXXXVGAVIAVPALIVGAAGTVAVVLQFGAIYRENKSTGLRMMVKYAVV 445
             P+EWDGR GK V VVIKRK VDT+AMYG FKTK  VP C KC  PFNYSWRNG            R  D  L R     +T   + S   P  SA+  G  +   GG   A    R+L K A  IR        R  + S+    RG  D   +PELWYG EFRRQL TYF PEL RP+ S  GGRY +GARVACFAG+D WYPGAV  SRENNTYDVRYDNGDIAQHVF HMIRFEP H+DS L CCYYGLAL AAA WPL G+WYFS+++             A++A+PAL+VG AGT+AV  Q   IY +N+STGL +  K+AV+
Sbjct:    2 LPDEWDGRTGKDVHVVIKRKAVDTRAMYGLFKTKPGVPLCSKCHTPFNYSWRNGGGSDKLMQQRQQRLLDAALSRPTSAASTAVAAGSATDPALSAAADGLMNAENGGVAAAAVHRRVLAKAARFIRGIYSQCRRRRAASSKTFDGRGGADAVEEPELWYGREFRRQLMTYFKPELSRPAAS--GGRYPVGARVACFAGKDAWYPGAVAASRENNTYDVRYDNGDIAQHVFSHMIRFEPVHADSRLTCCYYGLALAAAAAWPLAGSWYFSSTSAATDAATSA---AALVALPALVVGTAGTLAVAFQIWEIYADNRSTGLCVATKFAVI 325          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1144.3004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNQ8_ECTSI2.580e-12754.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3X8_9PHAE6.970e-10554.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 299..357
e-value: 1.3E-9
score: 39.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 405..428
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..361
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 429..445
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 362..385
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 386..404
NoneNo IPR availableTMHMMTMhelixcoord: 400..422
NoneNo IPR availableTMHMMTMhelixcoord: 363..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1144contigM-pyrifera_M_contig1144:6029..8147 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1144.3004.1mRNA_M-pyrifera_M_contig1144.3004.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1144 6029..8147 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1144.3004.1 ID=prot_M-pyrifera_M_contig1144.3004.1|Name=mRNA_M-pyrifera_M_contig1144.3004.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=445bp
GVFFVLATKAISVPPVCAGCRLGWGRRVHTLGEDGSGGGSGGGSCGRDQE
GDSYLEGGKFYGNARKERAPLGGGSSPHTSSADGEGGGGGGGGGGGGGPG
GVNGTFPKKTTKLALPARHWMCTVCKKVNGFPEEWDGRAGKAVEVVIKRK
KVDTQAMYGAFKTKLAVPTCVKCQAPFNYSWRNGRRDDGVLVRADGHGNT
LGLSRSPPRPTTSASTCGTDDTTAGGSPEAPSRPRMLVKMAGSIRKFVLH
PREVSPSEATGQRGVVDDSTDPELWYGNEFRRQLKTYFNPELERPSLSLR
GGRYSIGARVACFAGRDTWYPGAVTTSRENNTYDVRYDNGDIAQHVFPHM
IRFEPTHSDSELLCCYYGLALVAAATWPLMGAWYFSTSTTSTTSTEEAEG
VGAVIAVPALIVGAAGTVAVVLQFGAIYRENKSTGLRMMVKYAVV
back to top