mRNA_M-pyrifera_M_contig114328.2989.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: UPI000347F057 (NADH-quinone oxidoreductase subunit NuoH n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000347F057) HSP 1 Score: 323 bits (829), Expect = 6.520e-108 Identity = 167/188 (88.83%), Postives = 177/188 (94.15%), Query Frame = 1
Query: 4 GIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELVS 567
GIMQSLADGIKAFFKETF PSKSDPF+YKLAPYLMF+PAFLIW+V+PLGGDF+DGKDGTVTIFGQVTR+QLADP VGIL VLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLL SG+LSTA IV +Q F +WNL ATGIVPF IFL+ATTAELNRPPFDLVEAEQELVS
Sbjct: 62 GIMQSLADGIKAFFKETFRPSKSDPFLYKLAPYLMFIPAFLIWAVIPLGGDFTDGKDGTVTIFGQVTRVQLADPQVGILFVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLSSGSLSTARIVQTQDSFVDWNLVATGIVPFAIFLVATTAELNRPPFDLVEAEQELVS 249
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: A0A6C7E054_ILUCY (NADH-quinone oxidoreductase subunit H n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E054_ILUCY) HSP 1 Score: 314 bits (804), Expect = 3.750e-104 Identity = 160/189 (84.66%), Postives = 177/189 (93.65%), Query Frame = 1
Query: 1 FGIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELVS 567
FG++Q+LADGIK+FFKETF PSKSDPF+YKLAPYLMFVPAFL+W+VLPLGGDFSDGKDGT+TIFG+VTR+QLADP +GILLVL SSIAVYGV+LAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLL SG+LSTA IV SQ+ +WN+ ATGIVPFVIF+IA TAELNRPPFDLVEAEQELVS
Sbjct: 61 FGLLQTLADGIKSFFKETFRPSKSDPFLYKLAPYLMFVPAFLVWAVLPLGGDFSDGKDGTITIFGEVTRVQLADPQLGILLVLMCSSIAVYGVILAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLSSGSLSTASIVGSQNSLADWNIVATGIVPFVIFVIAVTAELNRPPFDLVEAEQELVS 249
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: A0A6N2DV32_9ACTN (NADH-quinone oxidoreductase subunit H n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DV32_9ACTN) HSP 1 Score: 298 bits (764), Expect = 4.010e-98 Identity = 149/188 (79.26%), Postives = 171/188 (90.96%), Query Frame = 1
Query: 1 FGIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELV 564
FGI+Q+LADG K FFKE P++SDP++++LAP+L FVPAFL+WSV+PLGGDF++G+DGTVT FGQVTR+QLADPPVGILLVLAMSSIAVYG+MLAGWASGSKYPLLG+VR SAQMISYEAALGLSLAAVLL +GTLSTAGIV+ Q+ NWNL ATG VPF +FL+A TAELNRPPFDLVEAEQELV
Sbjct: 61 FGILQTLADGTKLFFKEIMNPARSDPWVFRLAPFLAFVPAFLVWSVIPLGGDFTEGRDGTVTWFGQVTRVQLADPPVGILLVLAMSSIAVYGIMLAGWASGSKYPLLGSVRASAQMISYEAALGLSLAAVLLSAGTLSTAGIVAGQNSLSNWNLVATGFVPFFVFLVAVTAELNRPPFDLVEAEQELV 248
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: A0A524BAR3_9ACTN (NADH-quinone oxidoreductase subunit H n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524BAR3_9ACTN) HSP 1 Score: 288 bits (738), Expect = 2.870e-94 Identity = 142/187 (75.94%), Postives = 170/187 (90.91%), Query Frame = 1
Query: 4 GIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELV 564
G++Q+LADGIK FFKE P ++D F++KLAPYL FVPAFL+WSV+PLGGDFSDGK+G VT FG+ TR+QLADPPVGILLVLA+SSIAVYG+MLAGW+SGSKYPLLG+VR SAQM+SYEAALGLS+A VLL +GTLST+GIV++Q GF NW++ +TG+VPF+IFL+A TAELNRPPFDLVEAEQELV
Sbjct: 62 GLLQTLADGIKLFFKEDLLPDRADRFVFKLAPYLAFVPAFLVWSVIPLGGDFSDGKNGIVTWFGEQTRVQLADPPVGILLVLALSSIAVYGIMLAGWSSGSKYPLLGSVRASAQMVSYEAALGLSIATVLLLAGTLSTSGIVANQDGFTNWHVVSTGVVPFIIFLLAATAELNRPPFDLVEAEQELV 248
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: UPI000E34C5F1 (NADH-quinone oxidoreductase subunit NuoH n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E34C5F1) HSP 1 Score: 287 bits (734), Expect = 1.350e-93 Identity = 142/188 (75.53%), Postives = 169/188 (89.89%), Query Frame = 1
Query: 1 FGIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELV 564
FG++Q+LADG+K FKE F P ++D F+Y+LAP+L FVPAFL+WSV+PLGGDFS GKDGTV +FG VTRLQLADPPVGILLVLA+SS+AVYG+MLAGWASGSKYPLLG+VR SAQM+SYEAALGLS+AAVLL +GTL+T+GIV +Q+ F +W++ AT VPFVIF+IA TAELNRPPFDLVEAEQELV
Sbjct: 64 FGLLQTLADGMKLIFKEDFLPDRADRFVYRLAPFLAFVPAFLVWSVIPLGGDFSGGKDGTVELFGHVTRLQLADPPVGILLVLALSSVAVYGIMLAGWASGSKYPLLGSVRASAQMVSYEAALGLSVAAVLLTAGTLTTSGIVDAQNRFVDWSIVATAFVPFVIFVIAATAELNRPPFDLVEAEQELV 251
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: A0A2E3TR28_9ACTN (NADH-quinone oxidoreductase subunit H n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A2E3TR28_9ACTN) HSP 1 Score: 286 bits (732), Expect = 4.500e-93 Identity = 141/188 (75.00%), Postives = 168/188 (89.36%), Query Frame = 1
Query: 1 FGIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELV 564
FG++Q+LADGIK FFKE P+++ +++LAP+L FVPAFL+W+V+PLGGDFSDGKDG++TIFGQVTR+QLADPPVGILLVLA+S IAVYG+MLAGWASGSKYPLLGAVR +AQMISYEAALGLSLAAVLL S TLST GIV +Q F +WN+ TG++PF +F++ATTAELNRPPFDLVEAEQELV
Sbjct: 68 FGLLQTLADGIKLFFKEDLLPNRAXRIVFRLAPFLAFVPAFLVWAVIPLGGDFSDGKDGSITIFGQVTRVQLADPPVGILLVLALSGIAVYGIMLAGWASGSKYPLLGAVRATAQMISYEAALGLSLAAVLLSSRTLSTNGIVQTQDRFVDWNIITTGLLPFFVFVVATTAELNRPPFDLVEAEQELV 255
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: A0A2D8HN66_9ACTN (NADH-quinone oxidoreductase subunit H n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2D8HN66_9ACTN) HSP 1 Score: 286 bits (732), Expect = 5.700e-93 Identity = 142/188 (75.53%), Postives = 169/188 (89.89%), Query Frame = 1
Query: 1 FGIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELV 564
FG++Q+LADG K FFKE P K+DP ++++AP+L FVPAFL+W+V+PLGGDF++G DGTVT FG+VTR+QLADPP+G+LLVLAMSSIAVYGVMLAGW+SGSKYPLLG+VR SAQMISYEAALGLSLAAVL+ +GTLST+GIVS+QS NW+L +TGIVPFV+FLIA TAELNRPP DLVEAEQ LV
Sbjct: 62 FGLLQTLADGTKLFFKEDLIPEKADPLVFRIAPFLAFVPAFLVWAVIPLGGDFTNGHDGTVTWFGEVTRVQLADPPIGVLLVLAMSSIAVYGVMLAGWSSGSKYPLLGSVRASAQMISYEAALGLSLAAVLMTAGTLSTSGIVSAQSSITNWHLLSTGIVPFVVFLIAMTAELNRPPXDLVEAEQXLV 249
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: A0A7X9Q366_9ACTN (NADH-quinone oxidoreductase subunit H n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9Q366_9ACTN) HSP 1 Score: 285 bits (729), Expect = 8.660e-93 Identity = 139/187 (74.33%), Postives = 169/187 (90.37%), Query Frame = 1
Query: 4 GIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELV 564
G++Q+LADGIK FFKE P KSD F++KLAPYL FVPAFL+WSV+PLGGDFS+GKDGTV+I G+ T+LQLADPPVG+LL+LA+SS+AVYG+MLAGW+SGSKYPLLG+VR SAQM+SYEAALG SLA V+L +GTLST+GIV++QS F W++ ATG++PF+IFL+A TAELNRPPFDLVEAEQELV
Sbjct: 63 GLLQTLADGIKLFFKEDLIPEKSDRFVFKLAPYLAFVPAFLVWSVIPLGGDFSNGKDGTVSILGKATKLQLADPPVGVLLLLALSSVAVYGIMLAGWSSGSKYPLLGSVRASAQMVSYEAALGRSLATVILIAGTLSTSGIVAAQSSFTRWHVVATGVLPFIIFLLAATAELNRPPFDLVEAEQELV 249
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: A0A848UFU5_9ACTN (NADH-quinone oxidoreductase subunit H n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UFU5_9ACTN) HSP 1 Score: 285 bits (728), Expect = 1.300e-92 Identity = 143/188 (76.06%), Postives = 166/188 (88.30%), Query Frame = 1
Query: 1 FGIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELV 564
FG++Q+LADG K FFKE P K+D ++++L+P+L FVPAFL+WSV+PLGGDFSDG DGTV +FGQ TRLQLADPP+GIL+VLA+SSI VYG+MLAGWASGSKYPLLG+VR SAQMISYEAALGLSLA+VLL SGTLST+GIV+ Q+ WNL ATGI+PF IFLIA TAELNRPPFDLVEAEQELV
Sbjct: 56 FGLLQTLADGTKLFFKEDLLPEKADKWVFRLSPFLAFVPAFLLWSVIPLGGDFSDGNDGTVELFGQTTRLQLADPPMGILVVLALSSIGVYGIMLAGWASGSKYPLLGSVRASAQMISYEAALGLSLASVLLLSGTLSTSGIVAQQATLAEWNLVATGIIPFAIFLIAMTAELNRPPFDLVEAEQELV 243
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Match: A0A7W1LSY2_9ACTN (NADH-quinone oxidoreductase subunit H n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1LSY2_9ACTN) HSP 1 Score: 282 bits (722), Expect = 9.050e-92 Identity = 141/188 (75.00%), Postives = 168/188 (89.36%), Query Frame = 1
Query: 1 FGIMQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFSDGKDGTVTIFGQVTRLQLADPPVGILLVLAMSSIAVYGVMLAGWASGSKYPLLGAVRGSAQMISYEAALGLSLAAVLLGSGTLSTAGIVSSQSGFFNWNLFATGIVPFVIFLIATTAELNRPPFDLVEAEQELV 564
FG++Q+LADG+K FKE F P +++ +Y+LAP+L FVPAFL+WSVLPLGGDF DGK G VT FG+ TR+QLADPPVGILLVLA+SSIAVYG+MLAGW+SGSKYPLLG+VR +AQM+SYEAALGLSLAAVLL +GTLSTAGIV+SQ G +W+L ATG++PFVIF+IA TAEL+RPPFDLVEAEQELV
Sbjct: 61 FGLLQTLADGMKLIFKEGFVPDRANSLVYRLAPFLAFVPAFLVWSVLPLGGDFRDGKGGVVTWFGEETRVQLADPPVGILLVLALSSIAVYGIMLAGWSSGSKYPLLGSVRATAQMVSYEAALGLSLAAVLLTAGTLSTAGIVASQEGLSDWHLVATGVLPFVIFMIAATAELHRPPFDLVEAEQELV 248 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114328.2989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114328.2989.1 >prot_M-pyrifera_M_contig114328.2989.1 ID=prot_M-pyrifera_M_contig114328.2989.1|Name=mRNA_M-pyrifera_M_contig114328.2989.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp MQSLADGIKAFFKETFTPSKSDPFIYKLAPYLMFVPAFLIWSVLPLGGDFback to top mRNA from alignment at M-pyrifera_M_contig114328:5..571- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114328.2989.1 ID=mRNA_M-pyrifera_M_contig114328.2989.1|Name=mRNA_M-pyrifera_M_contig114328.2989.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig114328:5..571- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114328:5..571- >mRNA_M-pyrifera_M_contig114328.2989.1 ID=mRNA_M-pyrifera_M_contig114328.2989.1|Name=mRNA_M-pyrifera_M_contig114328.2989.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig114328:5..571- (Macrocystis pyrifera P11B4 male)back to top |