prot_M-pyrifera_M_contig114320.2988.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114320.2988.1
Unique Nameprot_M-pyrifera_M_contig114320.2988.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length107
Homology
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BLAST of mRNA_M-pyrifera_M_contig114320.2988.1 vs. uniprot
Match: A0A058ZDA1_FONAL (Uncharacterized protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZDA1_FONAL)

HSP 1 Score: 50.1 bits (118), Expect = 8.710e-5
Identity = 23/59 (38.98%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:    5 DPHLFGFDGSAYDFMGDAGAVYNLITDRDLQVNFDVVTITELSQMMKAFIGQMAFTTNS 63
            DPH  GF+G+ Y F G+AG  YN+++DRD+QVN      T L  +   ++G+++    S
Sbjct:  178 DPHFMGFNGADYYFEGEAGRSYNIVSDRDVQVN---AQFTRLHNLKGTYMGRVSILVGS 233
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114320.2988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A058ZDA1_FONAL8.710e-538.98Uncharacterized protein n=1 Tax=Fonticula alba Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114320contigM-pyrifera_M_contig114320:204..524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114320.2988.1mRNA_M-pyrifera_M_contig114320.2988.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114320 204..524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114320.2988.1 ID=prot_M-pyrifera_M_contig114320.2988.1|Name=mRNA_M-pyrifera_M_contig114320.2988.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
AGGGDPHLFGFDGSAYDFMGDAGAVYNLITDRDLQVNFDVVTITELSQMM
KAFIGQMAFTTNSGDRVVVDAGSSDRAASVTINGEETAAAELTGTLDGRS
FKLTRNS
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