mRNA_M-pyrifera_M_contig114314.2986.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114314.2986.1 vs. uniprot
Match: A0A6J3LVM6_9PEZI (BRCT domain-containing protein n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3LVM6_9PEZI) HSP 1 Score: 70.5 bits (171), Expect = 1.410e-11 Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = 1
Query: 103 WIESCILEKSILDPSSAVVLRPLPRRVPLKGASALQLCLTGFKGVERRQLKTLVIVMGFRYHEQLSPETKVLVC--KEPTGHKSMFARKWSVPAV 381
WIE I K LDPS V+ RPLPR L S +C+TGF GV+ RQ+ + ++GF Y ++L P T +L+ E K+ +A K +P V
Sbjct: 392 WIERSIQGKRALDPSEDVLSRPLPR---LSDCSGTTICITGFTGVDYRQIAQALTIIGFSYQDKLLPSTSLLISGSTEMRKEKAYYAAKHQIPVV 483
BLAST of mRNA_M-pyrifera_M_contig114314.2986.1 vs. uniprot
Match: A0A388LN47_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LN47_CHABU) HSP 1 Score: 59.3 bits (142), Expect = 1.220e-7 Identity = 32/99 (32.32%), Postives = 52/99 (52.53%), Query Frame = 1
Query: 91 VSPNWIESCILEKSILDPSSAVVLRPLPRRVPLKGASALQLCLTGFKGVERRQLKTLVIVMGFRYHEQLSPETKVLVCKEPTGHKSMFARKWSVPAVPL 387
V+ +W++SC++ KS+ DP S V+ RPL VPL C++ + ER+ K +V +G ++ E L +T L+C+ G K A + V L
Sbjct: 620 VTRHWVQSCLMHKSLRDPDSHVLYRPLRCSVPLPEFENRFFCISQYDDDERQYAKCMVKALGGKFSEILKNKTTHLLCRVAGGEKYRVALTLNATIVTL 718
BLAST of mRNA_M-pyrifera_M_contig114314.2986.1 vs. uniprot
Match: A0A401H207_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H207_9APHY) HSP 1 Score: 57.0 bits (136), Expect = 7.770e-7 Identity = 29/95 (30.53%), Postives = 45/95 (47.37%), Query Frame = 1
Query: 103 WIESCILEKSILDPSSAVVLRPLPRRVPLKGASALQLCLTGFKGVERRQLKTLVIVMGFRYHEQLSPETKVLVCKEPTGHKSMFARKWSVPAVPL 387
W+E CI ++ + +P+ V PL R P+ GA + L +G E ++ L +G S + L+C TG K AR+W VP V +
Sbjct: 536 WLERCIFQERVCEPTEHVSFSPLKIRTPIDGAENINLSFSGLDQSEACWVRRLARALGVNIALNFSRRSTHLLCPSRTGAKVEKAREWGVPIVDM 630
BLAST of mRNA_M-pyrifera_M_contig114314.2986.1 vs. uniprot
Match: A0A7S0KMH4_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KMH4_9CHLO) HSP 1 Score: 55.8 bits (133), Expect = 1.970e-6 Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 1
Query: 88 VVSPNWIESCILEKSILDPSSAVVLRPLPRRVP-LKGASALQLCLTGFKGVERRQLKTLVIVMGFRYHEQLSPETKVLVCKEPTGHKSMFARKWSVPAV 381
VVS WI +C+ K++LD S V+ P PR V L+ +C+TG+ G RR ++T+V V+G Y + LV E +G K AR W+ +
Sbjct: 106 VVSAEWIRACLSAKTLLDVDSNVLYVP-PRSVAGLEAFKDCVVCVTGYNGQRRRDVETMVKVLGGTYQKVFDRGVTHLVAFEFSGAKWERARGWTTAKI 203
BLAST of mRNA_M-pyrifera_M_contig114314.2986.1 vs. uniprot
Match: A0A4S4MQ68_9APHY (Uncharacterized protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4MQ68_9APHY) HSP 1 Score: 54.7 bits (130), Expect = 4.950e-6 Identity = 28/95 (29.47%), Postives = 45/95 (47.37%), Query Frame = 1
Query: 103 WIESCILEKSILDPSSAVVLRPLPRRVPLKGASALQLCLTGFKGVERRQLKTLVIVMGFRYHEQLSPETKVLVCKEPTGHKSMFARKWSVPAVPL 387
W+E C+ E+ I +PS + PL + P+ GA + L +G E ++ L +G S T L+C TG K AR+W++ V +
Sbjct: 568 WLERCMYEERICEPSEHIAFVPLGIQTPIAGAEEISLSCSGLDQSEGFWIRRLARALGITLAVTFSRRTTHLLCPSMTGAKFEKAREWNIAVVDM 662
BLAST of mRNA_M-pyrifera_M_contig114314.2986.1 vs. uniprot
Match: A0A196S9I9_BLAHN (Subunit of DNA polymerase 2 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S9I9_BLAHN) HSP 1 Score: 52.4 bits (124), Expect = 3.090e-5 Identity = 30/99 (30.30%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 91 VSPNWIESCILEKSILDPSSAVVLRPLPRRVPLKGASALQLCLTGFKGVERRQLKTLVIVMGFRYHEQLSPETKVLVCKEPTGH--KSMFARKWSVPAV 381
VS W++ C+ K ++ +S+++ RP PR + +CLTGF ++ ++++LVI +G + ++P T L+C+E + K ARK V V
Sbjct: 396 VSARWLKMCLEMKKLVPRNSSLLYRPFPRLL-----KDCVVCLTGFGYDDKVKMESLVIALGGKLENSVTPSTYALICQEHVKYNVKIAAARKLGVLVV 489
BLAST of mRNA_M-pyrifera_M_contig114314.2986.1 vs. uniprot
Match: A0A0H2SNB8_9AGAM (Uncharacterized protein n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2SNB8_9AGAM) HSP 1 Score: 51.6 bits (122), Expect = 5.840e-5 Identity = 32/118 (27.12%), Postives = 55/118 (46.61%), Query Frame = 1
Query: 37 YDRVRKRIGTQYGPARPVVSPNWIESCILEKSILDPSSAVVLRPLPRRVPLKGASALQLCLTGFKGVERRQLKTLVIVMGFRYHEQLSPETKVLVCKEPTGHKSMFARKWSVPAVPLQ 390
+D +R R T+ W+E CI E+ I +P+ V PL PL GA+ L++ ++G+ + L+ +G EQL+ ++ L+ K A++W +P V Q
Sbjct: 491 FDSLRSRFRTEC----------WLEQCIFEERICEPTEHVAFVPLDVETPLPGATNLRVHISGYPAHSKTFTVRLLKTIGAPVAEQLNRKSTHLLTCSTISAKYAKAQEWGLPCVGTQ 598
BLAST of mRNA_M-pyrifera_M_contig114314.2986.1 vs. uniprot
Match: UPI001C7BF0AE (uncharacterized protein n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7BF0AE) HSP 1 Score: 51.6 bits (122), Expect = 5.890e-5 Identity = 26/95 (27.37%), Postives = 43/95 (45.26%), Query Frame = 1
Query: 103 WIESCILEKSILDPSSAVVLRPLPRRVPLKGASALQLCLTGFKGVERRQLKTLVIVMGFRYHEQLSPETKVLVCKEPTGHKSMFARKWSVPAVPL 387
W+ESCI ++ + +PS V P+ P+ A + + +G E+ + LV +G S T L C G K A++W +P V +
Sbjct: 521 WLESCIFQERVCEPSQHVSFTPVGIPCPIDAAEKVFISFSGLDESEKYFMSRLVKALGLNLLPAFSKRTTHLFCPSAQGLKYEKAKEWGIPVVSM 615 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114314.2986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114314.2986.1 >prot_M-pyrifera_M_contig114314.2986.1 ID=prot_M-pyrifera_M_contig114314.2986.1|Name=mRNA_M-pyrifera_M_contig114314.2986.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp YVQYVIAPHGAKYDRVRKRIGTQYGPARPVVSPNWIESCILEKSILDPSSback to top mRNA from alignment at M-pyrifera_M_contig114314:169..561- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114314.2986.1 ID=mRNA_M-pyrifera_M_contig114314.2986.1|Name=mRNA_M-pyrifera_M_contig114314.2986.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=393bp|location=Sequence derived from alignment at M-pyrifera_M_contig114314:169..561- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114314:169..561- >mRNA_M-pyrifera_M_contig114314.2986.1 ID=mRNA_M-pyrifera_M_contig114314.2986.1|Name=mRNA_M-pyrifera_M_contig114314.2986.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig114314:169..561- (Macrocystis pyrifera P11B4 male)back to top |