mRNA_M-pyrifera_M_contig114312.2985.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: A0A7S4MJW6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MJW6_9EUKA) HSP 1 Score: 174 bits (440), Expect = 1.480e-51 Identity = 78/125 (62.40%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 16 IIRRKFDHNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIFQERYEQKI 390
I+RRK DHN+ EE+DFPILC SCLGDNPY+RM KE+ G ECK C RPFTVF+WKPGP+ R+KKTEIC C+K+KNVCQTC+LDL Y LP QI DQA+P ++ + S+ NRE F ++ E I
Sbjct: 6 IVRRKQDHNKQSWEENDFPILCESCLGDNPYLRMIKETFGKECKTCSRPFTVFKWKPGPRSRYKKTEICNVCAKLKNVCQTCILDLQYGLPTQIIDQALPNAI--KIPESDANREFFMDQAETMI 128
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: UPI001C3F73AB (pre-mRNA-splicing factor RBM22-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3F73AB) HSP 1 Score: 161 bits (408), Expect = 1.110e-48 Identity = 72/118 (61.02%), Postives = 92/118 (77.97%), Query Frame = 1
Query: 37 HNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIFQERYEQKI 390
+NR E++DFPILC +CLG+NPY+RMTKE G ECK+C RPFTVFRW PG + RFKKTE+CQTCSK+KNVCQTCLLDL Y LP Q+RD M S+ D+ S+VN+E + + E+++
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICSRPFTVFRWCPGARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGM--SLKDDMPKSDVNKEYYTQNMEREV 125
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: A0A6J1WA25_GALME (pre-mRNA-splicing factor RBM22 n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1WA25_GALME) HSP 1 Score: 163 bits (413), Expect = 1.270e-48 Identity = 74/110 (67.27%), Postives = 88/110 (80.00%), Query Frame = 1
Query: 37 HNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIF 366
+NR E+SDFPILC +CLGDNPY+RMTKE G ECK+CVRPFTVFRW PG + RFKKTEICQTCSK+KNVCQTCLLDL Y LP Q+RD A+ + D+ +EVN+E +
Sbjct: 10 YNRQNWEDSDFPILCQTCLGDNPYIRMTKEKYGKECKICVRPFTVFRWCPGARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDAAL--KIQDDLPRNEVNKEYY 117
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: A0A0S7LDU3_9TELE (RBM22 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LDU3_9TELE) HSP 1 Score: 163 bits (412), Expect = 2.090e-48 Identity = 74/119 (62.18%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 37 HNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIFQERYEQKIA 393
+NR E++DFPILC +CLG+NPY+RMTKE G ECK+C RPFTVFRW PG + RFKKTE+CQTCSK+KNVCQTCLLDL Y LP Q+RD + +V DE S+VN+E + + E++IA
Sbjct: 16 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGTRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGL--TVKDEIPRSDVNKEYYTQNMEREIA 132
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: A0A8J1U6K5_OWEFU (Pre-mRNA-splicing factor RBM22 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U6K5_OWEFU) HSP 1 Score: 169 bits (428), Expect = 3.000e-48 Identity = 75/120 (62.50%), Postives = 94/120 (78.33%), Query Frame = 1
Query: 37 HNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIFQERYEQKIAE 396
+NR EE+DFPILC +CLGDNPY+RMTKE G ECK+C RPFT+FRW PG + RFKKTE+CQTCSKVKN+CQTCLLDL Y LP Q+RD A+ + DE S+VN+E + + E++IA+
Sbjct: 10 YNRQNWEEADFPILCQTCLGDNPYIRMTKEKHGKECKICARPFTIFRWCPGARMRFKKTEVCQTCSKVKNICQTCLLDLEYGLPVQVRDAAL--KIADEMPKSDVNKEYYTQNMEREIAQ 127
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: A0A6P7WM99_IXOSC (Pre-mRNA-splicing factor RBM22 n=2 Tax=Ixodes TaxID=6944 RepID=A0A6P7WM99_IXOSC) HSP 1 Score: 169 bits (428), Expect = 3.190e-48 Identity = 78/121 (64.46%), Postives = 95/121 (78.51%), Query Frame = 1
Query: 37 HNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIFQERYEQKIAEG 399
+NR EE++FPILC +CLGDNPYVRMTKE G ECK+C RPFTVFRW PG + RFKKTE+CQTCSK+KNVCQTCLLDL Y LP Q+RD A+ S+ DE S+VN+E + + E+ +AEG
Sbjct: 10 YNRLNWEEAEFPILCQTCLGDNPYVRMTKEHYGKECKICSRPFTVFRWCPGGRMRFKKTEVCQTCSKLKNVCQTCLLDLDYGLPVQVRDNAL--SIKDEMPKSDVNKEYYSQNVERAVAEG 128
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: A0A6J8ELX7_MYTCO (RBM22 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8ELX7_MYTCO) HSP 1 Score: 162 bits (411), Expect = 3.240e-48 Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = 1
Query: 37 HNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIFQERYEQKIAE 396
+NR E+S+FPILC +CLGDNPY+RM KE G ECK+CVRPFTVFRW PG + R+KKTE+CQTCSK+KN+CQTCLLDL Y LP Q+RD A+ + D S+VN+E + + E K+A+
Sbjct: 10 YNRQNWEDSEFPILCQTCLGDNPYIRMMKEKYGKECKICVRPFTVFRWCPGARMRYKKTEVCQTCSKIKNICQTCLLDLEYGLPVQVRDAAL--KLQDNMPKSDVNKEYYTQNMEDKMAQ 127
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: UPI00193A464A (pre-mRNA-splicing factor RBM22-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A464A) HSP 1 Score: 169 bits (427), Expect = 3.970e-48 Identity = 75/119 (63.03%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 37 HNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIFQERYEQKIA 393
+NR EESDFPILC +CLGDNPY+RMTKE G ECK+C RPFT+FRW PG + RFKKTE+CQTCSK+KN+CQTCLLDL Y LP Q+RD A+ +ID+ S+VN+E + + E++IA
Sbjct: 10 YNRQNWEESDFPILCQTCLGDNPYIRMTKEKFGKECKICDRPFTIFRWCPGARMRFKKTEVCQTCSKLKNICQTCLLDLEYGLPVQVRDHAL--GLIDDLPKSDVNKEFYTQNMEREIA 126
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: A0A8B7YAC7_ACAPL (Pre-mRNA-splicing factor RBM22 n=3 Tax=Valvatida TaxID=41166 RepID=A0A8B7YAC7_ACAPL) HSP 1 Score: 169 bits (429), Expect = 4.220e-48 Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 37 HNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIFQERYEQKIA 393
+NR EE+DFPILC +CLGDNPY+RMTKE G ECK+C RPFT+FRW PG + RFKKTEICQTCSK+KNVCQTCLLDL Y LP Q+RD A+ ++ DE SEVN+E + + E++IA
Sbjct: 10 YNRQNWEEADFPILCQTCLGDNPYIRMTKEKFGRECKICDRPFTIFRWCPGARMRFKKTEICQTCSKIKNVCQTCLLDLEYGLPIQVRDAAL--NIKDEMPKSEVNKEYYSQNIERQIA 126
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Match: A0A397IWE8_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IWE8_9GLOM) HSP 1 Score: 166 bits (420), Expect = 7.300e-48 Identity = 79/124 (63.71%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 28 KFDHNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVCVRPFTVFRWKPGPKERFKKTEICQTCSKVKNVCQTCLLDLTYALPEQIRDQAMPESVIDEKAVSEVNREIFQERYEQKIAEG 399
K D N+ EESDFPILC +CLGDNPYVRMTK+ G ECKVC RPFT+FRW PG R+KKTEICQTC+K+KNVCQTCLLDL Y LP Q+RD A+ ++ +E SE+NRE F + E KI G
Sbjct: 4 KADPNKQGWEESDFPILCETCLGDNPYVRMTKQGFGKECKVCSRPFTIFRWLPGAGMRYKKTEICQTCAKLKNVCQTCLLDLQYNLPVQVRDTAL--NITNEAPRSEINREYFAQNIEGKIPAG 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114312.2985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114312.2985.1 >prot_M-pyrifera_M_contig114312.2985.1 ID=prot_M-pyrifera_M_contig114312.2985.1|Name=mRNA_M-pyrifera_M_contig114312.2985.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp MDSHLIIRRKFDHNRNKGEESDFPILCASCLGDNPYVRMTKESMGLECKVback to top mRNA from alignment at M-pyrifera_M_contig114312:20..487- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114312.2985.1 ID=mRNA_M-pyrifera_M_contig114312.2985.1|Name=mRNA_M-pyrifera_M_contig114312.2985.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig114312:20..487- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114312:20..487- >mRNA_M-pyrifera_M_contig114312.2985.1 ID=mRNA_M-pyrifera_M_contig114312.2985.1|Name=mRNA_M-pyrifera_M_contig114312.2985.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig114312:20..487- (Macrocystis pyrifera P11B4 male)back to top |