mRNA_M-pyrifera_M_contig11429.2973.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11429.2973.1
Unique NamemRNA_M-pyrifera_M_contig11429.2973.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: D8LNP1_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP1_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 5.820e-87
Identity = 142/157 (90.45%), Postives = 151/157 (96.18%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAY 473
            LG+EGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCA KY++ERKSFG+PI GLYAIQ KISEMS+KLDAARLLTWKAAAARDAGEN+TKEAA AKLFASE ATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSE+QH+VIAGSV+K Y
Sbjct:  255 LGEEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGQPICGLYAIQSKISEMSMKLDAARLLTWKAAAARDAGENYTKEAAMAKLFASETATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEIQHMVIAGSVVKEY 411
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BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: A0A836C965_9STRA (Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C965_9STRA)

HSP 1 Score: 243 bits (619), Expect = 6.040e-76
Identity = 124/158 (78.48%), Postives = 142/158 (89.87%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAYE 476
            LG +G GFKIAMGTLD GRIG+A QALGIA ASLDCA KYA ERK+FG PIS LYAIQHK+S+M+ ++DAARLLTW+AAA +DAG ++T+EAA AKL ASEAATFC+H AIQVLGGMGYVSEMPAERHYRDARITEIYEGTSE+QHLVIAG++LK Y+
Sbjct:  216 LGAKGAGFKIAMGTLDTGRIGVAAQALGIAQASLDCAVKYATERKAFGTPISSLYAIQHKLSDMANRVDAARLLTWRAAATKDAGRSYTREAAQAKLVASEAATFCAHQAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGALLKEYK 373
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BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: A0A7S4FFB3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FFB3_9EUGL)

HSP 1 Score: 242 bits (617), Expect = 5.490e-75
Identity = 127/158 (80.38%), Postives = 142/158 (89.87%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAYE 476
            LGKEG GFKIAM TLD GRIGIAGQALGIA AS+DCAAKYAL+R++FGKPIS LYAIQ K+SEM  KL +ARLLTW AA A+D G++F+KEAA AKL ASEAATFCSH AIQVLGGMGYVS+MPAERHYRDARITEIYEGTSE+QHLVIAG++LK Y+
Sbjct:  259 LGKEGEGFKIAMTTLDGGRIGIAGQALGIAQASIDCAAKYALDREAFGKPISSLYAIQLKLSEMECKLQSARLLTWNAAMAKDKGDDFSKEAAMAKLVASEAATFCSHRAIQVLGGMGYVSDMPAERHYRDARITEIYEGTSEIQHLVIAGNLLKHYK 416
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BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: A0A7S0BYY7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYY7_9STRA)

HSP 1 Score: 231 bits (589), Expect = 7.600e-73
Identity = 121/158 (76.58%), Postives = 136/158 (86.08%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAYE 476
            LGKEG GFKIAM TLD GRIG+AGQALGIA+AS+DCA  YALER +FGKPIS L  IQHKIS M +  D+ARLLTW+AA+ +DA E FT+EAA AKL ASEAAT CSH AIQ+LGGMGYV+EMPAERHYRDARITEIYEGTSE+QHLVIAG V+K Y+
Sbjct:  108 LGKEGEGFKIAMTTLDGGRIGVAGQALGIASASIDCAVTYALERHAFGKPISSLQMIQHKISTMVMARDSARLLTWRAASLKDAKEKFTREAAMAKLAASEAATMCSHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQHLVIAGDVIKEYK 265
[Close]
BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: A0A7S1NP91_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NP91_9EUGL)

HSP 1 Score: 234 bits (597), Expect = 5.220e-72
Identity = 125/158 (79.11%), Postives = 139/158 (87.97%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAYE 476
            LG+EG GFKIAM TLD GRIGIAGQALGIA AS+DCAAKYALERK+FG PIS LYAIQ K+S+M  +L AARLLTWKAA A+D  E++ KEAA AKL ASEAATFCSH AIQ+LGGMGYV++MPAER+YRDARITEIYEGTSEVQHLVIAG +LK YE
Sbjct:  259 LGQEGEGFKIAMWTLDGGRIGIAGQALGIAQASVDCAAKYALERKAFGAPISKLYAIQLKLSQMECRLQAARLLTWKAAIAKDRKEDYVKEAAMAKLCASEAATFCSHQAIQILGGMGYVTDMPAERYYRDARITEIYEGTSEVQHLVIAGRLLKEYE 416
[Close]
BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: A0A812RDM2_SYMMI (ACADS protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RDM2_SYMMI)

HSP 1 Score: 229 bits (584), Expect = 8.960e-71
Identity = 119/157 (75.80%), Postives = 136/157 (86.62%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAY 473
            LG++G GFK+AM TLD GRIGIAGQALGIA+AS+DCA KY+LERK+FGK I  +YAIQ KI+EMS +LDAARLLTWKAA   D G  F K+AA AKLFASE ATFCSH AIQVLGGMGYV++MPAERHYRDARITEIYEGTSE+Q +VIAG+V+K Y
Sbjct:  211 LGEQGAGFKVAMSTLDGGRIGIAGQALGIASASMDCAVKYSLERKAFGKSICTMYAIQEKIAEMSTRLDAARLLTWKAAMLADRGLPFIKDAAQAKLFASETATFCSHQAIQVLGGMGYVTDMPAERHYRDARITEIYEGTSEIQKVVIAGNVIKRY 367
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BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: A0A7S1V5S8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V5S8_9STRA)

HSP 1 Score: 230 bits (587), Expect = 2.260e-70
Identity = 120/158 (75.95%), Postives = 138/158 (87.34%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAYE 476
            LG+ G GFKIAM TLD GRIG+AGQALGIA+AS+DCA KYALER +FGKPI+ L  IQ+KIS+M+V  D+ARLLTW+AA  +DAG+ FT+EAA AKL ASEAAT CSH AIQ+LGGMGYV+EMPAERHYRDARITEIYEGTSE+QHLVIAG VLK Y+
Sbjct:  280 LGQPGEGFKIAMQTLDGGRIGVAGQALGIASASIDCAVKYALERNAFGKPIAQLQTIQNKISKMTVARDSARLLTWRAAQLKDAGKRFTREAAMAKLAASEAATMCSHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQHLVIAGDVLKEYK 437
[Close]
BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: A0A7R9VC60_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VC60_9STRA)

HSP 1 Score: 232 bits (591), Expect = 4.120e-70
Identity = 120/158 (75.95%), Postives = 139/158 (87.97%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAYE 476
            LG+ GMGFKIAM  LD GRIG+AGQALGIA+A++DCAAKYALERK+FGKPIS L +IQ+KIS M+V  D+ARLLTW+AA  +D GE FT+EAA AKL ASEAAT C+H +IQVLGGMGYVS+MPAERHYRDARITEIYEGTSE+QHLVIAG +LK Y+
Sbjct:  362 LGEPGMGFKIAMQVLDGGRIGVAGQALGIASAAIDCAAKYALERKAFGKPISDLQSIQNKISAMAVARDSARLLTWRAAMMKDKGEKFTREAAMAKLAASEAATMCAHQSIQVLGGMGYVSDMPAERHYRDARITEIYEGTSEIQHLVIAGDILKEYK 519
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BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: A0A7R9ZLE8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLE8_9STRA)

HSP 1 Score: 229 bits (584), Expect = 4.400e-70
Identity = 120/158 (75.95%), Postives = 135/158 (85.44%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAYE 476
            LG EGMGFKIAM TLD GRIG+AGQALGIA+AS+DCA KYALER +FGKPIS L  IQ+KIS M+V  DAARLLTW+AA  +D G+ F +EAA AKL ASEAAT CSH AIQ+LGGMGYV+EMPAERHYRDARITEIYEGTSE+QHLVIA  V+K Y+
Sbjct:  267 LGDEGMGFKIAMQTLDGGRIGVAGQALGIASASIDCAVKYALERNAFGKPISELQTIQNKISAMTVARDAARLLTWRAAQLKDDGQRFVREAAMAKLAASEAATMCSHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQHLVIANDVIKEYK 424
[Close]
BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Match: A0A7S1D9M2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9M2_CYCTE)

HSP 1 Score: 221 bits (564), Expect = 5.560e-69
Identity = 117/158 (74.05%), Postives = 135/158 (85.44%), Query Frame = 3 
Query:    3 LGKEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLYAIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLKAYE 476
            +G+ G GFKIAM TLD GRIG+AGQALGIA+AS+D A KYALER++F KPI+ L +IQ+KIS M V  DAARLLTW+AA  +D GE FT+EAA AKL ASEAAT CSH AIQ+LGGMGYVS+MPAER+YRDARITEIYEGTSE+QHLVIAG VLK Y+
Sbjct:  114 IGEPGQGFKIAMQTLDGGRIGVAGQALGIASASIDVATKYALERQAFDKPIASLQSIQNKISAMVVARDAARLLTWRAAQLKDNGERFTREAAMAKLAASEAATMCSHQAIQILGGMGYVSDMPAERYYRDARITEIYEGTSEIQHLVIAGDVLKEYK 271
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11429.2973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNP1_ECTSI5.820e-8790.45Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836C965_9STRA6.040e-7678.48Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus Tax... [more]
A0A7S4FFB3_9EUGL5.490e-7580.38Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0BYY7_9STRA7.600e-7376.58Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1NP91_9EUGL5.220e-7279.11Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A812RDM2_SYMMI8.960e-7175.80ACADS protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S1V5S8_9STRA2.260e-7075.95Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7R9VC60_9STRA4.120e-7075.95Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7R9ZLE8_9STRA4.400e-7075.95Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1D9M2_CYCTE5.560e-6974.05Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11429contigM-pyrifera_M_contig11429:704..4305 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.2
Seed ortholog evalue9.8e-69
Seed eggNOG ortholog2880.D8LNP1
Preferred nameACADS
KEGG rclassRC00052,RC00068,RC00076,RC00120,RC00148
KEGG koko:K00248
KEGG ReactionR01175,R01178,R02661,R03172,R04751
KEGG Pathwayko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212
Hectar predicted targeting categoryother localisation
GOsGO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0003995,GO:0004085,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005759,GO:0006082,GO:0006139,GO:0006351,GO:0006352,GO:0006366,GO:0006367,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009062,GO:0009605,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0010467,GO:0014070,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016070,GO:0016491,GO:0016592,GO:0016627,GO:0017076,GO:0018130,GO:0019395,GO:0019438,GO:0019605,GO:0019626,GO:0019752,GO:0022607,GO:0030258,GO:0030554,GO:0031090,GO:0031667,GO:0031960,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032787,GO:0032991,GO:0033218,GO:0033539,GO:0033993,GO:0034440,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0042221,GO:0042594,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044271,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046359,GO:0046395,GO:0046459,GO:0046483,GO:0048037,GO:0048545,GO:0050660,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051384,GO:0052890,GO:0055114,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072329,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901567,GO:1901575,GO:1901576,GO:1901681
EggNOG free text desc.oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
EggNOG OGsCOG1960@1,KOG0139@2759
Ec32 ortholog descriptionacyl-CoA dehydrogenase
Ec32 orthologEc-08_006390.1
EC1.3.8.1
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size685
Cds size462
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815658.8377745-UTR-M-pyrifera_M_contig11429:703..9091622815658.8377745-UTR-M-pyrifera_M_contig11429:703..909Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11429 704..909 -
1692277508.800815-UTR-M-pyrifera_M_contig11429:703..9091692277508.800815-UTR-M-pyrifera_M_contig11429:703..909Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11429 704..909 -
1622815658.912659-UTR-M-pyrifera_M_contig11429:4288..43051622815658.912659-UTR-M-pyrifera_M_contig11429:4288..4305Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11429 4289..4305 -
1692277508.8532248-UTR-M-pyrifera_M_contig11429:4288..43051692277508.8532248-UTR-M-pyrifera_M_contig11429:4288..4305Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11429 4289..4305 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815658.8503602-CDS-M-pyrifera_M_contig11429:909..10341622815658.8503602-CDS-M-pyrifera_M_contig11429:909..1034Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 910..1034 -
1692277508.8111162-CDS-M-pyrifera_M_contig11429:909..10341692277508.8111162-CDS-M-pyrifera_M_contig11429:909..1034Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 910..1034 -
1622815658.8629088-CDS-M-pyrifera_M_contig11429:1596..16211622815658.8629088-CDS-M-pyrifera_M_contig11429:1596..1621Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 1597..1621 -
1692277508.8213596-CDS-M-pyrifera_M_contig11429:1596..16211692277508.8213596-CDS-M-pyrifera_M_contig11429:1596..1621Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 1597..1621 -
1622815658.8744664-CDS-M-pyrifera_M_contig11429:2561..27141622815658.8744664-CDS-M-pyrifera_M_contig11429:2561..2714Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 2562..2714 -
1692277508.8301218-CDS-M-pyrifera_M_contig11429:2561..27141692277508.8301218-CDS-M-pyrifera_M_contig11429:2561..2714Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 2562..2714 -
1622815658.8863454-CDS-M-pyrifera_M_contig11429:3656..37551622815658.8863454-CDS-M-pyrifera_M_contig11429:3656..3755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 3657..3755 -
1692277508.8374586-CDS-M-pyrifera_M_contig11429:3656..37551692277508.8374586-CDS-M-pyrifera_M_contig11429:3656..3755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 3657..3755 -
1622815658.8988037-CDS-M-pyrifera_M_contig11429:4228..42881622815658.8988037-CDS-M-pyrifera_M_contig11429:4228..4288Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 4229..4288 -
1692277508.8451705-CDS-M-pyrifera_M_contig11429:4228..42881692277508.8451705-CDS-M-pyrifera_M_contig11429:4228..4288Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11429 4229..4288 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11429.2973.1prot_M-pyrifera_M_contig11429.2973.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11429 910..4288 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11429.2973.1

>prot_M-pyrifera_M_contig11429.2973.1 ID=prot_M-pyrifera_M_contig11429.2973.1|Name=mRNA_M-pyrifera_M_contig11429.2973.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp
MGFKIAMGTLDAGRIGIAGQALGIAAASLDCAAKYALERKSFGKPISGLY
AIQHKISEMSVKLDAARLLTWKAAAARDAGENFTKEAASAKLFASEAATF
CSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEVQHLVIAGSVLK
AYE*
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mRNA from alignment at M-pyrifera_M_contig11429:704..4305-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11429.2973.1 ID=mRNA_M-pyrifera_M_contig11429.2973.1|Name=mRNA_M-pyrifera_M_contig11429.2973.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3602bp|location=Sequence derived from alignment at M-pyrifera_M_contig11429:704..4305- (Macrocystis pyrifera P11B4 male)
TGCTGGGAAAGGAGGGCATGGGGTTCAAGATAGCCATGGGGACCCTAGAT
GCCGGAAGGATTGGCATCGCAGGACAGGTGATGTTTCGCTTCGCGCTGGC
AAGTGCGCAGGAGGCGAAGTACCCGACCTTAGACAGAGAGCAGCCGTGTT
TTTCTGCACGATAAACATGCGGATCTGTGCATGTGTAACTCGTGCCTAGT
CGACCCGGTGCGTCTTCCCGCGCGCCGAACTGTTTATTTGCGGGAGTTGT
CGTGTCGTGGTGATGTCTTCATCCCCCTCCCCTGCACCGAGAAGCATAAA
TTTCAACTCGAACTTGTTTGACGGGAGACGTATCCGACGTTTCAGAGGTA
GAGTGTGCCTGGGTAATCGCGCGACGAACGCGCTCCACCTTGTAGGCGTA
GCCTCGAGTGCCAAACGGCGATCTTGCGCAGCGCGATCCAACGACGAACA
GGTTCGGGAGCCCTCGTCCCCAAAACGGACATGTCATGGTGAAGTATACC
TCCTTGAGCTGGAAGTGGAGTGAACACATGTCAATGTATCGACGCTGCAG
GCTCTCGGTATTGCTGCCGCCAGCTTGGACTGCGCCGCGAAGTATGCCCT
CGAGAGGAAGTCGTTCGGCAAGCCCATCAGCGGGCTATACGCGATACAGG
TGCGTTCAAGTCTTGTTTTTTGAGCTGGTGTTGGTGGTAATCAGCTCTGT
GCATGGGTCTCCCAGCCGCCTGGTGTACGGTATGAAACGCAAGATAACAC
ACCTTTCAGGGCGAATTATTGATCTGATTTTCCCGGCAACGGGGAAGGTA
CATCTGCCGAGCGATGTGCGTAGGGGAAGATCTCGACAAGATATTTCCAA
AGCAACCTTTTTGGTTGTGTGTACGCCTTTGTTCCGGAGAAAACCGGCTC
TGAAATCCATTCCAAGAGGCGCTGTTGTCATATCACGCGTGAGTTACAGC
AATACGAACAAACCTCCACGTTTACCGTGCTGCTGTTAGTCGTCGATTGT
TTTGACGTTTGTTGGTCTGTTTGTTCTCCACCACTACCTTTTTCCACTGA
AAAACCCATAGCAGCGTTCATGCATGATCAAAAACAAAGCGAGTCCTACA
GGATTGCTGTTTAGACTAGCCTCCGGTGTGTGCGTGGCCCAATAAGGCCC
TGTTGAACCAACTCTCTCTGAACAGTATACTGTAGGACCCAAACAGCGAC
CAGAGTCCGATGCTCGTTATCTTCCACCGGCGCCATGAAGCGCCCGAGGG
AGTCCGGAACACACGTTCGCCTCCGGCCGCAACGCCCGTTCTAATCCATT
CAGCGTATTTAAGGGTCCAAATTCCCCTCAGCATGCGATTGGCCTCCCAG
TCCCCCCCCGCTCATTACCTGCCTCCTCCTGCGTAGCCACACCCTCGTTG
ACATCGCCGACGCAGCATATGAGTTGAGGTAGATGCCGCATGTTGCTGGC
CTGCCCAGGTATAGCTGTCGTGATATTGTGAAGCGCTCGTGAAGGGGTGA
CGCGCCCCACAGTTGAGTTCCTAATGCTCAAAGCTGAAACTTATATATTT
GATGCCGCTGTGGCTCCTCCACTCGGCCCGTTTGTTTTCAGCACAAAATC
TCAGAGATGAGCGTAAAGCTTGACGCCGCCCGTCTGCTGACATGGAAAGC
AGCGGCCGCCCGCGATGCTGGGGAGAACTTCACCAAGGAGGCGGCTTCAG
CTAAACTCTTCGCCTCTGAGGCAGCTACCTTCTGTTCGCACGCGGTAAGC
TGCGGCGGGAGATCACTAATTTTTTCGGGCATTGCTTTCCAGTAACTGGT
GTGCGATATATTGTTGTTTTAGTTTTTTATATTTTTTTGACCTGGAGGAC
CTCCTTTAGAATATTACGATCATTTGCAGTTTCAGCTGCAAGTACCCTTC
GCACTCGTTTGAACCCAAGCCGTTCGTGACGTGGCCATGTACGCGATTCA
GGCAACCCGGCGACGGAAAAACCGTCCTTTTGATTGGTGCAGCAATGCCA
ATCGTTTCCACCGTTTGTCACCGGCCTTGGGAGGTGTGCTTAGGGTAGTG
GGTGTACAGTGATGTCAATTGTCATTGACCCCAAAGTCGTGCAGCCCGTA
GCGTGTCTCAAATCCGCCCGGAAAATGTCTATTTGGGTACTACGTGCGGT
GTGTTGTACAACCGTACGGCATAAATCATTGTCCAGACGATTGGTTTCTC
CGTCGCGGTATATGATAATATGCATGCGTGCTAGCTATGCCTTCCACCAA
CGCGGGGTGCACTGCGCACGGCGTAGAAGTGACAACCAAGCAAAACAGTG
ATACGGTTATCGTTGTGTTTGCTTCCTAGGGGATTTCGCCCGGGTCACAC
GTGAGGCCGTGAAATGTAGTTCGCTTGGTGCGACTGTTATCCAAGTCGAG
TGTTGTACCGATGCGCACGGCGTAGAAATGACAAGCAAGCAAAACGGTGA
TACGCTTATCGTGGTGTTTGTTATTCCGAAGGTATTTCGCCCGGGTCACA
TTTGAGGCCGTGAAATTTAGTTCGATTTTGTGCGACTGCTACCCGAGTCA
GAGTGTTGTACCGATTTTGGGCCTTATTCGTGACGACCTTTTGCTCTGAT
GGTTGCCCGCTACCTCTTTTATCCATCTGTTTTCGGGCGCATGTGTGCGG
CGAATGTCCTGTCTGTGCGATATCGTGCAAGCAGGCGATCCAAGTCTTGG
GAGGCATGGGTGAGTGCTCCAGCAGATGTCTGCCATAACGTCGAAAAACT
CTCAGGCCTGACGCGACAAAATCCCTCTGCGTCGTCGGTACACCCTTGAA
TCGTTGGCACCGGCAGAGAGAAAGGCTCTTACCGTACATGATGCTCGCCC
GGCTGGTCGATCTACCTGTATGCCAACCTCTTTCGAAGGTCGGCTTCCAC
GTTTTTCGTCGCGCGTATATTTGTATCGTGCGCTCATCGGTTCCGTGGTC
ATCATTGCCTGCTCTTTACAATACACTATTTCAGGGGGCTAAGGTATGTT
TAGTTGGGTATGAGGTACCCCGGTGTCGACGTGTTGTTTTTTGTAGTATT
CGGGTAGGCGTACTGGTACCCTTAGACTGCGTTCCTGACCACGTGTGCAC
ACCCGTCAAGGTACTTTGCACCCCACCCCCAGCTTGTCAGTCGACATCTG
CGTCATCGTTGATGGCGTGTACGAAATTTACGGAGAATGTTTCAGCTATG
ACAAGCGATGACATACATCGTGGCCAGCTACAGTTTGATTTGCGCCTCTT
GTACCCACCTATTTTGATCAGGCTACGTTTCGGAGATGCCCGCGGAACGC
CACTACCGAGACGCTCGCATTACGGAGATTTACGAAGGAACGTCGGAAGT
ACAACACCTGGTCATCGCTGGGAGTGTGCTGAAAGCGTACGAGTAACGAA
AAATTGACTGTACGGCATGGCATACGTTTGGTGACCCTCCCGGGGAACAC
CATGGCTCGTCTACTTTTGCACCTCGTGCCACGGAGAAAATATACAAACA
CGGCAGGGGTTTTGCGCTTGTTGTAGAAAATATGGTGAGATCGGAACAGG
GATATAGAGCGAGAGGAGAGAGAGAAAGAGAGAGAGTGGGAGGACGAGGG
AG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11429:704..4305-

>mRNA_M-pyrifera_M_contig11429.2973.1 ID=mRNA_M-pyrifera_M_contig11429.2973.1|Name=mRNA_M-pyrifera_M_contig11429.2973.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=924bp|location=Sequence derived from alignment at M-pyrifera_M_contig11429:704..4305- (Macrocystis pyrifera P11B4 male)
ATGGGGTTCAAGATAGCCATGGGGACCCTAGATGCCGGAAGGATTGGCAT
CGCAGGACAGATGGGGTTCAAGATAGCCATGGGGACCCTAGATGCCGGAA
GGATTGGCATCGCAGGACAGGCTCTCGGTATTGCTGCCGCCAGCTTGGAC
TGCGCCGCGAAGTATGCCCTCGAGAGGAAGTCGTTCGGCAAGCCCATCAG
CGGGCTATACGCGATACAGGCTCTCGGTATTGCTGCCGCCAGCTTGGACT
GCGCCGCGAAGTATGCCCTCGAGAGGAAGTCGTTCGGCAAGCCCATCAGC
GGGCTATACGCGATACAGCACAAAATCTCAGAGATGAGCGTAAAGCTTGA
CGCCGCCCGTCTGCTGACATGGAAAGCAGCGGCCGCCCGCGATGCTGGGG
AGAACTTCACCAAGGAGGCGGCTTCAGCTAAACTCTTCGCCTCTGAGGCA
GCTACCTTCTGTTCGCACGCGCACAAAATCTCAGAGATGAGCGTAAAGCT
TGACGCCGCCCGTCTGCTGACATGGAAAGCAGCGGCCGCCCGCGATGCTG
GGGAGAACTTCACCAAGGAGGCGGCTTCAGCTAAACTCTTCGCCTCTGAG
GCAGCTACCTTCTGTTCGCACGCGGCGATCCAAGTCTTGGGAGGCATGGG
CGATCCAAGTCTTGGGAGGCATGGGCTACGTTTCGGAGATGCCCGCGGAA
CGCCACTACCGAGACGCTCGCATTACGGAGATTTACGAAGGAACGTCGGA
AGTACAACACCTGGTCATCGCTGGGAGTGTGCTGAAAGCGTACGAGTAAG
CTACGTTTCGGAGATGCCCGCGGAACGCCACTACCGAGACGCTCGCATTA
CGGAGATTTACGAAGGAACGTCGGAAGTACAACACCTGGTCATCGCTGGG
AGTGTGCTGAAAGCGTACGAGTAA
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