mRNA_M-pyrifera_M_contig11423.2969.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: D8LRU3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU3_ECTSI) HSP 1 Score: 443 bits (1140), Expect = 2.340e-150 Identity = 229/357 (64.15%), Postives = 262/357 (73.39%), Query Frame = 1
Query: 10 STSETVHAP---FGDSTVQGREESWACKSIEANSSAQSPCPRGGCSWTKVGSKYVLFGGADAHQQHFDDVHCFDAATSTWEKTPVSGTPPSSRSGHSAVALGESLVVYGGMNGQDGVTFNDIFELRTGF---MEWVSLSCADTPPXXXXXXXXXXXXXXXXXXASPDGQTDDVFAVDLSDRSNLNCVQVSCHQSESGACVVQ-SDGVGGVPAARDMHSACVYSSE-LTGGAGATILLMGGRSSAGVLQDLFSLNTDTWSWKRLKDAPVARCAHSACFLEDAGIMVIHGGWDGGTLVADDLHLYDVRSGEWTTPSVLPRPMGRFAHATCTGG-GNSLLVFGGVNPHEDLTDVVVLTAA 1053
ST H P GD + +G E+W CK+I A+SS Q P PRGGCSWTKVGSK+VLFGGAD QQHF D+HCFDAA WEKTPVSG PPS R+GHSAVALGESLVVYGGMNGQDGVTFND+FELR G MEWV L C D PP ASP+GQTDDVF +DLS+R+NL C +V C ESG + S+GVGGVPAAR+MHS C Y+SE TG TILLMGGRS+ GVL+DLF+L TDTW+WKRLKDAPVARCAHSACF++ AGIM I+GGWDGGT VADDLHLYDV GEWT P + P GRFAHA C G ++VFGGV+P +DL DV++L+AA
Sbjct: 67 STGAVAHPPVGGIGDRSSRG--ETWVCKTIAASSSTQQPSPRGGCSWTKVGSKFVLFGGADERQQHFSDIHCFDAAIGKWEKTPVSGAPPSPRNGHSAVALGESLVVYGGMNGQDGVTFNDLFELRPGSTEGMEWVPLPCVDIPPRNAHTAVLDGETMIVIAGASPEGQTDDVFTIDLSNRANLACRRVFCQPFESGTGERRCSEGVGGVPAAREMHSTCAYNSEGTTGERATTILLMGGRSAGGVLRDLFALRTDTWTWKRLKDAPVARCAHSACFVQAAGIMAIYGGWDGGTTVADDLHLYDVGCGEWTKPRISPTTAGRFAHAACAVGLEGEMIVFGGVHPGQDLDDVLLLSAA 421
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: A0A7S2AZD4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZD4_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.250e-29 Identity = 115/336 (34.23%), Postives = 153/336 (45.54%), Query Frame = 1
Query: 73 WACKSIEANSSAQSPCPRGGCSWTKVGSKYVLFGGADAHQQHFDDVHCFDAATSTWEKTPVS---GTPPSSRSGHSAVALGESLVVYGGMNGQDGVTFNDIFELRTGFMEWVSLSCAD------TPPXXXXXXXXXXXXXXXXXXASPDGQTDDVFAVDLSDRSNLNCVQVSCHQSESGACVVQSDGVGGVPAARDMHSACVYSSELTGGAGA-----TILLMGGRSSAG-VLQDLFSLNTDTWSWKRLKDA-PVARCAHSACFLEDAGIMVIHGGWDGGTLVADDLHLYDVRSGEWTTPSVLPRPMGRFAHATCTGGGNSLLVFGGVNPHEDLTD 1032
W C+ SSA P RGGC+ T VGS + GGAD H +DVH D + W + V+ PS RSGHS VA G LV++GG N +ND+F L T E ++ S AD T AS G +DV +DL+D S V C G P AR+MHSA ++ + A + +IL++GGR +G VL D +SLN TW+W + A P RCAH A + +V+ GG DG L D + L + G P P RF HA G +L+FGG++ +DL D
Sbjct: 110 WTCECRV--SSANFPS-RGGCTATMVGSSMFVVGGADRAGNHMNDVHVLDTTSWEWRQATVAQDAAAAPSPRSGHSTVACGSHLVLFGGANMSVEACYNDVFLLATDGDE-LTWSQADPSGPKPTARNSHSATMVSPTAMVVFGGASEMGPLNDVHVLDLADLSAPVWQAVQCQ--------------GLAPTAREMHSATLWPTVDAMAAESVAQAPSILVLGGRVESGEVLADAWSLNPGTWAWTKSDHALPTPRCAHVATVVNSQ--VVLFGGIDGAGLPEDLMALDEEGWGPVELVGSTPPPP-RFGHAGTAAPGVGMLIFGGISLTDDLLD 424
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: A0A6G0XP48_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP48_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.710e-26 Identity = 103/353 (29.18%), Postives = 158/353 (44.76%), Query Frame = 1
Query: 34 PFGDSTVQGREESWACKSIEANSSAQSPCPRGGCSWTKVGSK----YVLFGGADAHQQHFDDVHCFDAATSTW-EKTPVSGTPPSSRSGHSAVALGESLVVYGGMNGQDGVTFNDIFELRTGFMEWVSLSCAD---TPPXXXXXXXXXXXXXXXXXXASP-DGQTDDVFAVDLSDRSNLNCVQVSCHQSESGACVVQSDGVGGVPAARDMHSACVYSSELTGGAGATILLMGGRSSAGVLQDLFS-LNTDTWSWKRLKDAPVARCAHSACFLEDAGIMVIHGGWDGGTLVADDLH--LYDVRSGEWTTP----SVLPRPMGRFAHATCTGGGNSLLVFGGVNPHEDLTDVVVL 1044
P D E+++ + A + P RGG + T V S+ L GGA+ + F+DVH FD W + +P + RSGH+++A+G + V+GG N ++G +ND+ L T MEW S CAD PP +SP G +D F + D + ++ ++ + A R++HSACV ++ + + GGR +G L D S L+T+TW+W RCAH + + + + GGWDGG DD DVRS P + + GRFAH C + L++FGG+ +DL D ++L
Sbjct: 17 PVQDEENDTTEKTYTLSACPATYDSNLPAKRGGATLTPVTSEGKTLLYLIGGANRAAEAFNDVHVFDYDKKRWTQASPQDNSAFEPRSGHTSIAIGACIYVFGGANLREGKVYNDLHILNTDTMEWTS-PCADGDIPPPRSSHIAVALPQGMLIFGGSSPLVGGMNDTFLLTSKD-GHFTWKSIASPEAATLA-------------KRELHSACVLNN--------LVYICGGRLESGELCDELSILDTETWTWTIESMPAWRRCAHVSGVVHNQWLHF--GGWDGGAEFCDDCWQLALDVRSSCCKAPMRQVELNGQGNGRFAHCGCVVD-DKLVIFGGMTVQDDLNDTLIL 343
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: A0A6G0NCE7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NCE7_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.090e-25 Identity = 98/354 (27.68%), Postives = 154/354 (43.50%), Query Frame = 1
Query: 73 WACKSIEANSSAQSPCPRGGCSWTKVGSKYVLF--GGADAHQQHFDDVHCFDAATSTWEKTPVSGTPPSSRSGHSAVALGESLVVYGGMNGQDGVTFNDIFELRTGFMEWVSLSCADTPPXXXXXXXXXXXXXXXXXXASPDGQTDDVFAVDLSDRSNLNCVQVSCHQSESGAC--VVQSDGVG-GVPAARDMHSACVYSSELTGGAGATILLMGGRSSAG-VLQDLFSLNTDTWSWKRLKDAPVARCAHSACFLEDAGIMVIHGGWDGGTLVADDLH------------LYDVRSGEWTTPSVLPRPMGRFAHATCT------------GGGNSLLVFGGVNPHEDLTDVVVL 1044
+A +S+ + SA P RGG + T+VG +++ GGA+ F DVHCFD T W+ S S RSGHSAVA+G + V+GG + G TFND+ T + W + P + ++++ L + V H ++ + DG VP AR++HSA + S I +GGR+ G + D+ +L+ +W+W+ + RC+ +A ++ G +V GGWD G + D H L + ++G T P+ +P RF H T LL+FGG+N DL D+V++
Sbjct: 58 YAAESVAMDDSALKPAKRGGATLTQVGEGGLIYLIGGANREGASFGDVHCFDFETRAWKFVIPSSGSLSPRSGHSAVAIGSKIYVFGGFDVAAGATFNDVNVFDTRTLSWYEAAVEGEEPRPRNAHAAIILPEDDDSRETRRMLVHGGSSLEVGASDELFLLHVPVHDVDTALRWEKLSPDGERTSVPEARELHSALLQSES-------AICFVGGRNFDGKICTDMATLDIKSWTWQLMPICEWNRCSLAAGVID--GALVSFGGWDVGRICGDCCHYSDEEESWIHATLAECKTGNQTEPA-MPEVPERFGHCGTTITVQPSNQPNAKATRQGLLIFGGMNAQSDLDDLVLI 401
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: A0A6G0K043_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0K043_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.170e-25 Identity = 103/359 (28.69%), Postives = 157/359 (43.73%), Query Frame = 1
Query: 73 WACKSIEANSSAQSPCPRGGCSWTKVGSKYVLF--GGADAHQQHFDDVHCFDAATSTWEKTPVSGTPPSSRSGHSAVALGESLVVYGGMNGQDGVTFNDI--FELRTGFMEWVSL---SCADTPPXXXXXXXXXXXXXXXXXXASPDGQTDDVFAVDLSDRSNLNCVQVSCHQSESGACVVQSDGVGGVPAARDMHSACVYSSELTGGAGATILLMGGRSSAG-VLQDLFSLNTDTWSWKRLKDAPVARCAHSACFLEDAGIMVIHGGWDGGTLVAD------------DLHLYDVRSGEWTTPSVLPRPMGRFAHATCT------------GGGNSLLVFGGVNPHEDLTDVVVLTAA 1053
+A +S+ + SA P R G + T+VG +++ GGA+ F DVHCFD T W+ S S RSGHSAVA+G + V+GG++ G TFND+ F+ RT + L +C T P D++F + V H ++ + G P AR++HSA + S TI GGR+ G V D+ +L+ +W+W+ + RC+ +A ++ G +V GGWDGG + D L + ++G+ T P+ L RF H T LL+FGG+N DL D+V++ A+
Sbjct: 11 YAVESVAMDESALKPAKRWGATLTQVGESGLIYLIGGANREGASFGDVHCFDFETRAWKFVIPSSGSLSPRSGHSAVAIGSKIYVFGGLDVAAGATFNDVNVFDTRTSSWRPIHLKPDACWSTEARR------------------PKSVLDELFLL-----------HVPVHDVDTALRWEKLSPDGDAPEARELHSALLQSES-------TICFAGGRNFDGKVCTDMATLDIKSWTWQLMPICEWNRCSLAAGVID--GELVSFGGWDGGRICGDCCRYSDEEESWIQATLAECKAGKQTEPA-LTEVSERFGHCGTTVTVQPSNQPNAKATRQGLLIFGGMNAQSDLADLVLIIAS 330
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: A0A6A3HB55_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HB55_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.450e-25 Identity = 95/351 (27.07%), Postives = 151/351 (43.02%), Query Frame = 1
Query: 73 WACKSIEANSSAQSPCPRGGCSWTKVGSKYVLF--GGADAHQQHFDDVHCFDAATSTWEKTPVSGTPPSSRSGHSAVALGESLVVYGGMNGQDGVTFNDIFELRTGFMEWVSLSCADTPPXXXXXXXXXXXXXXXXXXASPDGQTDDVFAVDLSDRSNLNCVQVSCHQSESGACVVQSDGVGGVPAARDMHSACVYSSELTGGAGATILLMGGRSSAG-VLQDLFSLNTDTWSWKRLKDAPVARCAHSACFLEDAGIMVIHGGWDGGTLVAD------------DLHLYDVRSGEWTTPSVLPRPMGRFAHATCT------------GGGNSLLVFGGVNPHEDLTDVVVL 1044
+A +S+ + SA P RGG + T+VG +++ GGA+ F DVHCFD T W+ S S RSGHSAVA+G + V+GG++ G ++ND+ T W + P + + L + V H ++ + G VP AR++HSA + S I GGR+ G + D+ +L+ +W+W+ + RC+ +A ++ G +V GGWDGG + D + L + ++G+ P+V P RF H + T LL+FGG+N DL D+V++
Sbjct: 11 YAVESVAMDESALKPAKRGGATLTQVGEGGLVYLIGGANREGASFGDVHCFDFETRAWKLVSPSSGSLSPRSGHSAVAVGAKIYVFGGLDVAAGASYNDVNVFDTRTSSWCEAAVEGEAPRPRNAHAAIVLPEEDDSLETRRMLVHGGSSPKFGASDELFLLHVPVHDVDTALRWEKLSPDGEVPEARELHSALLQSES-------AICFAGGRNFDGKICTDMATLDIKSWTWQLVPICEWNRCSLAAGVID--GELVSFGGWDGGRICGDCCRYSDEEESWIQVTLAECKTGKQAEPAVSEVPE-RFGHCSTTVTIQPLNQPNANATRQGLLIFGGMNAQSDLDDLVLI 351
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: A0A7S4JXU9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXU9_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.190e-25 Identity = 105/362 (29.01%), Postives = 163/362 (45.03%), Query Frame = 1
Query: 34 PFGDSTVQGRE----ESWACKSIEANSSAQSPCPR---GGCSWTKVGSKYVLFGGADAHQQHFDDVHCFDAATSTWEKTPVS-GTPPSSRSGHSAVALGESLVVYGGMNGQDG---------VTFNDIFELRTGFMEW-----VSLSCADTP-PXXXXXXXXXXXXXXXXXXASPDGQTDDVFAVDLSDRSNLNCVQVSCHQSESGACVVQSDGVGGVPAARDMHSACVYSSELTGGAGATILLMGGRSSAG-VLQDLFSLNTDT-WSWKRLKDAPVARCAHSACFLEDAGIMVIHGGWDGGTLVADDLHLYDVRSGEWTTPSVLPR--PMGRFAHATCTGGGNSLLVFGGVNPHEDLTDVV 1038
PF + V+ + E W C S +PCP GG + T V + FGG D + +D+ T+ W S G PP++R GH+AVA G + ++GG D V+FND+ L TG M W V+++ A T P D F +D ++ + + +SES V + G P AR+MHSA +S++ +MGGR +G V +DL+ + D + W L ++ RC+H FL + ++ GGWDG + D++ ++D+ +W P+ L P RF HA+C G + L + GGVN +DL ++V
Sbjct: 42 PFNEDAVERADITTVEKWIC-------SEHAPCPYAVGGGSTLTNVDGRLYTFGGCDRRGIPSSRLAYYDSDTNDWVCDLRSEGVPPTARFGHTAVASGSKIYIFGGQGFADNESNCSLVTMVSFNDLHCLDTGKMVWKQLCGVNMAVAPTENPENTKDAAKPSPRNSHTAVLIGDNMI--TFGGANADEGPMDDMWIFNLKSESWRKVKREHQDGKHPDAREMHSAYAANSKM--------YIMGGRMGSGDVCRDLWECDPDNGFKWTHLANSSSPRCSHGGDFLSSSKLLCSFGGWDGMGQIFDEITVFDLSQKKWA-PAQLHGYLPTERFGHASCVKG-DRLYIIGGVNASDDLKELV 384
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: A0A6G0N1Y6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0N1Y6_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.120e-24 Identity = 96/351 (27.35%), Postives = 152/351 (43.30%), Query Frame = 1
Query: 73 WACKSIEANSSAQSPCPRGGCSWTKVGSKYVLF--GGADAHQQHFDDVHCFDAATSTWEKTPVSGTPPSSRSGHSAVALGESLVVYGGMNGQDGVTFNDIFELRTGFMEWVSLSCADTPPXXXXXXXXXXXXXXXXXXASPDGQTDDVFAVDLSDRSNLNCVQVSCHQSESGACVVQSDGVGGVPAARDMHSACVYSSELTGGAGATILLMGGRSSAG-VLQDLFSLNTDTWSWKRLKDAPVARCAHSACFLEDAGIMVIHGGWDGGTLVAD------------DLHLYDVRSGEWTTPSVLPRPMGRFAHATCT------------GGGNSLLVFGGVNPHEDLTDVVVL 1044
+A +S+ + SA P RGG + T+VG +++ GGA+ F DVHCFD T W+ S S RSGHSAVA+G + V+GG++ G ++ND+ T W + P + + L + V H ++ + G VP AR++HSA + S I GGR+ G + D+ +L+ +W+W+ + RC+ +A ++ G +V GGWDGG + D + L + ++G+ T P+V P RF H + T LL+FGG+N DL D+V++
Sbjct: 266 YAVESVAMDESALKPAKRGGATLTQVGEGGLVYLIGGANREGASFGDVHCFDFETRAWKLVSPSSGSLSPRSGHSAVAVGAKIYVFGGLDVAAGASYNDVNVFDTRTSSWCEAAVEGEAPRPRNAHAAIVLPEEDDSLETRRMLVHGGSSPKFGASDELFLLHVPVHDVDTALRWEKLSPDGEVPEARELHSALLQSES-------AICFAGGRNFDGKICTDMATLDIKSWTWQLVPICEWNRCSLAAGEID--GELVSFGGWDGGRICGDCCRYSDEEESWIQVTLAECKTGKQTEPAVSEVPE-RFGHCSTTVTIQPLNQPNANATRQGLLIFGGMNAQSDLDDLVLI 606
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: A0A6A3J373_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J373_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.100e-23 Identity = 102/359 (28.41%), Postives = 156/359 (43.45%), Query Frame = 1
Query: 73 WACKSIEANSSAQSPCPRGGCSWTKVGSKYVLF--GGADAHQQHFDDVHCFDAATSTWEKTPVSGTPPSSRSGHSAVALGESLVVYGGMNGQDGVTFNDI--FELRTGFMEWVSL---SCADTPPXXXXXXXXXXXXXXXXXXASPDGQTDDVFAVDLSDRSNLNCVQVSCHQSESGACVVQSDGVGGVPAARDMHSACVYSSELTGGAGATILLMGGRSSAG-VLQDLFSLNTDTWSWKRLKDAPVARCAHSACFLEDAGIMVIHGGWDGGTLVAD------------DLHLYDVRSGEWTTPSVLPRPMGRFAHATCT------------GGGNSLLVFGGVNPHEDLTDVVVLTAA 1053
+A +S+ + SA P R G + T+VG +++ GGA+ F DVHCFD T W+ S S R GHSAVA+G + V+GG++ G TFND+ F+ RT + L +C T P D++F + V H ++ + G P AR++HSA + S TI GGR+ G V D+ +L+ +W+W+ + RC+ +A ++ G +V GGWDGG + D L + ++G+ T P+ L RF H T LL+FGG+N DL D+V++ A+
Sbjct: 209 YAVESVAMDESALKPAKRWGATLTQVGEGGLIYLIGGANREGASFGDVHCFDFETRAWKFVIPSSGSLSPRCGHSAVAIGSKIYVFGGLDVAAGATFNDVNVFDTRTSSWRPIHLKPDACWSTEARR------------------PKSVLDELFLL-----------HVPVHDVDTALRWEKLSPDGDAPEARELHSALLQSES-------TICFAGGRNFDGKVCTDMATLDIKSWTWQLMPICEWNRCSLAAGVID--GELVSFGGWDGGRICGDCCRYSDEEESWIQATLAECKAGKQTEPA-LTEVSERFGHCGTTVTVQPSNQPNAKATRQGLLIFGGMNAQSDLADLVLIIAS 528
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Match: A0A8K1FG14_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG14_PYTOL) HSP 1 Score: 110 bits (274), Expect = 5.150e-23 Identity = 103/367 (28.07%), Postives = 169/367 (46.05%), Query Frame = 1
Query: 52 VQGREESWACKSIEANSSAQSPCPRGGCSWTKV-GSKYVLFGGADAHQQHFDDVHCFDAATSTWEKT-PVSGTPPSSRSGHSAVALGESLVVYGGMNGQDGVTFNDIFELRTGFMEWVSLSCADTPPXXXXXXXXXXXXXXXXXX-------ASPD-GQTDDVFAVDLS--DRSN-LNCVQVSCHQSESGACVVQSDGVGGVPAARDMHSACVYSSELTGGAGATILLMGGRSSAG-VLQDLFSLNTDTWSWKRLKDAPVARCAHSACFLEDAGIMVIHGGWDGGTLVADDLHLYDVRSGEW-----TTPSV-----------LPRPMGRFAHATCTGGGNS-----LLVFGGVNPHEDLTDVVVLT 1047
+Q R++ +A +++ N + +P PRGG + +++ + L GGA+ F D H FD T TW P G P+ RSGHSA+A+G+ +VV+GG++ + + ++D+ T +W P +SP G DD++ +++S DR+ L ++ QSE Q + +P AR++H A + + + GGR+ G + D+ L+ ++W W+ + RC+H+A ++ G +V GGW+GG + DD Y W T+PS +P RF H CT N LLVFGG+N +DL D+V +T
Sbjct: 9 LQARQQ-YAVETLRVNGT-MTPAPRGGATLSQLENGEIYLIGGANRETHSFGDAHRFDFETKTWSLVVPERGNLPA-RSGHSAIAIGDEIVVFGGLDPTECIVYDDVHIFSTRTRQWRQPDVEGWMPQPRNAHAAIRLPDQDGQHRILIYGGSSPSHGAFDDLYVLEMSIEDRAAPLRWDRIEDKQSEGA----QDE----IPEARELHIATFLTDK-------QVCFSGGRNRDGSICTDMALLDIESWRWQLVPICEWNRCSHAAGLVD--GTLVSFGGWNGGA-ITDDTWEYADNEESWLSAQITSPSKDEKDPERDETQIPE---RFGHCGCTIQPNKDSPTGLLVFGGMNGEQDLNDLVWIT 351 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11423.2969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11423.2969.1 >prot_M-pyrifera_M_contig11423.2969.1 ID=prot_M-pyrifera_M_contig11423.2969.1|Name=mRNA_M-pyrifera_M_contig11423.2969.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp MNGQDGVTFNDIFELRTGFMEWVSLSCADTPPRNSHSAVLDGDTMLIIGGback to top mRNA from alignment at M-pyrifera_M_contig11423:3523..6204+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11423.2969.1 ID=mRNA_M-pyrifera_M_contig11423.2969.1|Name=mRNA_M-pyrifera_M_contig11423.2969.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2682bp|location=Sequence derived from alignment at M-pyrifera_M_contig11423:3523..6204+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11423:3523..6204+ >mRNA_M-pyrifera_M_contig11423.2969.1 ID=mRNA_M-pyrifera_M_contig11423.2969.1|Name=mRNA_M-pyrifera_M_contig11423.2969.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig11423:3523..6204+ (Macrocystis pyrifera P11B4 male)back to top |