mRNA_M-pyrifera_M_contig114217.2965.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: A0A4D9DFM4_9STRA (Palmitoyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFM4_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.240e-26 Identity = 63/135 (46.67%), Postives = 81/135 (60.00%), Query Frame = 1
Query: 16 IRCMCMRETQEAPPQYCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGVLLMTAWS------PAE-----GLVGSWPAFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWVV 387
I C CM TQ A +YC+ CRK GLDHHC+WLNT +G RNYF F+++S++G+LQF LQS+ +LL+T W PA G ++ A + A S AL F SLC FH YLL G GTYDW++
Sbjct: 76 IPCRCMAYTQ-AHSRYCASCRKSVPGLDHHCLWLNTCIGARNYFFFFLLSLAGTLQFALQSLISILLLTHWLNTTEEVPAMVQRTLGRAVTYQAILIIHTAMSGIALLSFA---SLCVFHGYLLTRGLGTYDWIL 206
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: G4ZU25_PHYSP (Palmitoyltransferase n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZU25_PHYSP) HSP 1 Score: 106 bits (264), Expect = 4.020e-25 Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 1
Query: 1 TLLQTIRCMCMRETQEAPPQYCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGVLLMTAWSP---AEGLVGSWPAFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWVV 387
T++ T C+C P +YC +C K++ GLDHHC WLNT + NY FY + VS + Q LLQ+V G+L+ T W A G A AL+ +A L++ + V L GFHTYLL +G GTYD+++
Sbjct: 53 TIVITAWCICESRDPAKPSRYCGLCYKNSPGLDHHCTWLNTCIAESNYEAFYCLVVSATCQTLLQTVIGILMCTLWQSEVKANAAEGWDQAVIALLWIHNAACLSLTNSFVLLAGFHTYLLRVGMGTYDFIL 184
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: A0A5A8DYM4_CAFRO (Palmitoyltransferase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DYM4_CAFRO) HSP 1 Score: 103 bits (257), Expect = 3.220e-23 Identity = 55/123 (44.72%), Postives = 71/123 (57.72%), Query Frame = 1
Query: 16 IRCMCMRETQEAPPQYCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGVLLMTAWSPAEGLVGSWPAFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWV 384
+ C CM+ TQ + CS+CRK +GLDHHC +LNT +G RNY F+ +S+ +LQ Q VF VL MT W +Y L+ Q+ A GA SL GFH YLL +G GTYDW+
Sbjct: 73 VACPCMKRTQSSQSN-CSLCRKPVVGLDHHCYFLNTCIGKRNYAHFFALSLCSTLQMAAQVVFSVLGMTVWIERGN---DNVLYYVLVGLQALIAAVAGGATCSLLGFHVYLLWIGMGTYDWM 191
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: A0A225X1Z1_9STRA (Palmitoyltransferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X1Z1_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.800e-23 Identity = 51/124 (41.13%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 25 MCMRETQEAPPQYCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGVLLMTAWSP---AEGLVGSWPAFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWVV 387
+C P +YC +C K++ GLDHHC WLNT + NY FY + VS + Q LLQS G+++ T W A + G A AL+ +A L++ + V L GFHTYLL +G GTYD+++
Sbjct: 63 ICESRDPSKPSRYCGLCFKNSPGLDHHCTWLNTCIAESNYEAFYCLVVSATCQTLLQSALGIIMCTLWEAEVRANAVDGWETAVIALLWIHNAACLSLTNSFVLLAGFHTYLLYVGMGTYDFIL 186
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: K3X7H4_GLOUD (Palmitoyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7H4_GLOUD) HSP 1 Score: 96.3 bits (238), Expect = 1.240e-22 Identity = 52/118 (44.07%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 52 PPQ---YCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGVLLMTAW-SPAEGLVGS-W-PAFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWVV 387
PP+ YC++C K++ GLDHHC WLNT +G NY FY + VS ++Q LLQ+V G+L+ T W S + V S W L+ +A L++ + L GFHTYLL +G GTYD+++
Sbjct: 14 PPKVTRYCTICCKNSPGLDHHCTWLNTCIGENNYEAFYCLVVSATIQTLLQAVIGILMATLWFSQVKAQVSSDWHQPMLVLLWIHNAICLSLANSYFLLAGFHTYLLWIGSGTYDFIL 131
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: D0P2Q3_PHYIT (Palmitoyltransferase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P2Q3_PHYIT) HSP 1 Score: 97.4 bits (241), Expect = 8.780e-22 Identity = 51/128 (39.84%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 25 MCMRETQEAPPQYCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGVLLMTAW------SPAEGLVGSWP-AFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWVV 387
+C P +YC +C K++ GLDHHC WLNT + NY FY + VS + Q LLQ+V G+L+ T W + AEG W A L+ +A +++ + + L GFHTYLL +G GTYD+++
Sbjct: 61 ICELRDPSKPSRYCGLCFKNSPGLDHHCTWLNTCIAESNYESFYCLVVSATCQTLLQTVIGILMCTLWQSEVKTNAAEG----WDKALITLIWIHNAACMSLTSSFLLLAGFHTYLLCIGMGTYDFIL 184
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: W2N3P4_PHYPR (Palmitoyltransferase n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2N3P4_PHYPR) HSP 1 Score: 97.4 bits (241), Expect = 1.460e-21 Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 46 EAPPQ---YCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGVLLMTAWSP---AEGLVGSWPAFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWVV 387
+APP+ YC +C K++ GLDHHC WLNT + NY FY + VS + Q LLQ+V G+L+ T W A G A L+ +A +++ + V L GFHTYLL +G GTYD+++
Sbjct: 81 KAPPKESRYCGLCYKNSPGLDHHCTWLNTCIAESNYEAFYYLVVSSTCQTLLQTVIGILMCTLWQSEVKANTAEGWDEAVIVLLWIHNAACISLTNSFVLLAGFHTYLLYVGMGTYDFIL 200
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: A0A2P4Y4E9_9STRA (Palmitoyltransferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4E9_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.580e-21 Identity = 51/130 (39.23%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 22 CMCMRETQEAP-----PQYCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGVLLMTAWSPA--EGLVGSWP-AFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWVV 387
C+C P +YC +C K++ GLDHHC WLNT + NY FY + VS + Q LLQ+V G+L+ T W W A L+ +A L++ + V L GFHTYLL +G GTYD+++
Sbjct: 60 CICESRDPSKPVPRKESRYCGLCYKNSPGLDHHCTWLNTCIAESNYEAFYCLVVSATCQTLLQTVLGILMCTLWESEVQTNATDGWETAVVVLLWIHNAACLSLTNSFVLLAGFHTYLLCVGMGTYDFIL 189
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: A0A329S9R6_9STRA (Palmitoyltransferase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S9R6_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 9.400e-21 Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 46 EAPPQ---YCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGVLLMTAWSP---AEGLVGSWPAFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWVV 387
+ PP+ YC +C K++ GLDHHC WLNT + NY FY + VS + Q LLQ+V G+L+ T W A G A AL+ +A +++ + V L GFHTYLL +G GTYD+++
Sbjct: 82 KVPPKESRYCGLCYKNSPGLDHHCTWLNTCIAESNYEAFYWLVVSAACQTLLQTVIGILMCTLWESEVKANAADGWDKAVIALLWIHNAACISLTNSFVLLAGFHTYLLCVGVGTYDFIL 201
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Match: A0A2R5GQX8_9STRA (Palmitoyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQX8_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.010e-20 Identity = 52/124 (41.94%), Postives = 75/124 (60.48%), Query Frame = 1
Query: 28 CMRETQEAPPQYCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGSLQFLLQSVFGV-LLMTAWSPAEGLV---GSWPAFYALMAAQSAGALAIFGAVVSLCGFHTYLLVLGRGTYDWVV 387
C R T +A +YC+VC+K GLDHHC WL VGTRNY QFY++SV G + Q V G+ L++ S +G+ GS F A++ ++ I + +SL FHTYLL +G+GTY +++
Sbjct: 77 CFR-TSQAKARYCAVCKKVVPGLDHHCPWLGHCVGTRNYLQFYLLSVMGWVCAAWQCVIGLYLVLDETSREQGIARAQGSKTTFAAILGVHFLCSVIILSSYISLWAFHTYLLYIGKGTYMYMI 199 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114217.2965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114217.2965.1 >prot_M-pyrifera_M_contig114217.2965.1 ID=prot_M-pyrifera_M_contig114217.2965.1|Name=mRNA_M-pyrifera_M_contig114217.2965.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp MCMRETQEAPPQYCSVCRKHTLGLDHHCVWLNTDVGTRNYFQFYVMSVSGback to top mRNA from alignment at M-pyrifera_M_contig114217:135..521- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114217.2965.1 ID=mRNA_M-pyrifera_M_contig114217.2965.1|Name=mRNA_M-pyrifera_M_contig114217.2965.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig114217:135..521- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114217:135..521- >mRNA_M-pyrifera_M_contig114217.2965.1 ID=mRNA_M-pyrifera_M_contig114217.2965.1|Name=mRNA_M-pyrifera_M_contig114217.2965.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig114217:135..521- (Macrocystis pyrifera P11B4 male)back to top |