mRNA_M-pyrifera_M_contig114213.2964.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114213.2964.1 vs. uniprot
Match: A0A5A8CSJ7_CAFRO (Calponin-homology (CH) domain-containing protein n=9 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CSJ7_CAFRO) HSP 1 Score: 82.4 bits (202), Expect = 1.110e-15 Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 1
Query: 10 VGRAKLWFGECPVGDYRDVLVTLRNPSATTEIAWHAEKIAHFATKPRRGTLLPNQTQKVVLTFKPRSLGPHKPTIHLCGEGDLVKVPIRLVGTATKPPPDLEAELRERNAKMRGPDADPATFSRRYQFV 396
+ R L+FG+C VGD RDV VTL NPS T ++ + +A + PRRG L P +++++V+TF+P + G H+ + + G L + +RL G A +L R A RGP A P F+ +FV
Sbjct: 672 LSRRMLYFGDCAVGDRRDVAVTLSNPSDTLDLDFSIANVAQYEVTPRRGRLGPQESRQLVVTFRPSNQGAHRMRMPIQLAGGLAQAELRLEGEALG---NLGGTKR---AVARGPGAPPEAFTTTRKFV 794
BLAST of mRNA_M-pyrifera_M_contig114213.2964.1 vs. uniprot
Match: A0A7J6SJG0_PEROL (Chromosome X 22 n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SJG0_PEROL) HSP 1 Score: 80.9 bits (198), Expect = 3.710e-15 Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 1
Query: 4 LEVGRAKLWFGECPVGDYRDVLVTLRNPSATTEIAWHAEKIAHFATKPRRGTLLPNQTQKVVLTFKPRSLGPHKPTIHLCGEGDLVKVPIRLVGTATKPPPDLEAELRERNAKMRGPDADPATFSRRYQFV 396
L V + L FG CPVGD RD+++TLRN A+ I W ++H +P G + P TQ+VV+TF P+SLG H+ IH+ L V + +G E + G +A P F+ Y+FV
Sbjct: 994 LSVAPSSLDFGGCPVGDRRDIVLTLRNEHASLPIDWAVPNVSHINVRPASGKIGPLSTQEVVVTFSPKSLGNHQRDIHVMYCNRLYSVVVYAIGWG-------EVAGGPGQKQRHGLEAIPEDFAPHYKFV 1117
BLAST of mRNA_M-pyrifera_M_contig114213.2964.1 vs. uniprot
Match: A0A7J6N6N0_PEROL (Chromosome X 22 (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6N6N0_PEROL) HSP 1 Score: 79.3 bits (194), Expect = 1.250e-14 Identity = 47/131 (35.88%), Postives = 66/131 (50.38%), Query Frame = 1
Query: 4 LEVGRAKLWFGECPVGDYRDVLVTLRNPSATTEIAWHAEKIAHFATKPRRGTLLPNQTQKVVLTFKPRSLGPHKPTIHLCGEGDLVKVPIRLVGTATKPPPDLEAELRERNAKMRGPDADPATFSRRYQFV 396
L V + L FG CPVGD RD+++TLRN A+ I W +H +P G + P TQ+VV+TF P+SLG H+ IH+ L V + +G E + G +A P F+ Y+FV
Sbjct: 728 LSVAPSSLDFGGCPVGDRRDIVLTLRNEHASLPIDWAIPNTSHINVRPAAGKIGPLSTQEVVVTFSPKSLGNHQRDIHVMYCNKLYSVMVYAIGWG-------EVAGGPGQKQRHGLEAIPEDFAPEYKFV 851
BLAST of mRNA_M-pyrifera_M_contig114213.2964.1 vs. uniprot
Match: A0A7J6MET3_PEROL (Chromosome X 22 n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MET3_PEROL) HSP 1 Score: 77.4 bits (189), Expect = 5.870e-14 Identity = 45/131 (34.35%), Postives = 65/131 (49.62%), Query Frame = 1
Query: 4 LEVGRAKLWFGECPVGDYRDVLVTLRNPSATTEIAWHAEKIAHFATKPRRGTLLPNQTQKVVLTFKPRSLGPHKPTIHLCGEGDLVKVPIRLVGTATKPPPDLEAELRERNAKMRGPDADPATFSRRYQFV 396
L V + L FG CPVGD RD+++TLRN A+ I W ++H +P G + P TQ+ V+TF P+SLG H+ I + L V + +G E + G +A P F+ Y+FV
Sbjct: 569 LSVSPSSLDFGGCPVGDRRDIVLTLRNEHASLPIDWAVRSVSHINVRPSSGKIGPLSTQEAVVTFSPKSLGNHQRDISIMYCNKLYSVKVYAIGWG-------EVARGPGQKQRHGLEAIPEDFAPDYKFV 692
BLAST of mRNA_M-pyrifera_M_contig114213.2964.1 vs. uniprot
Match: A0A7J6LL65_PERCH (Chromosome X 22 n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LL65_PERCH) HSP 1 Score: 77.0 bits (188), Expect = 8.510e-14 Identity = 42/131 (32.06%), Postives = 67/131 (51.15%), Query Frame = 1
Query: 4 LEVGRAKLWFGECPVGDYRDVLVTLRNPSATTEIAWHAEKIAHFATKPRRGTLLPNQTQKVVLTFKPRSLGPHKPTIHLCGEGDLVKVPIRLVGTATKPPPDLEAELRERNAKMRGPDADPATFSRRYQFV 396
L A L FG CP+GD RD++VTLRN A+ + W ++H P G + P TQ+VV+TF P+S+G H+ + + L + + +G E R + +G +A+ F+ +Y+FV
Sbjct: 239 LSASPASLDFGGCPMGDRRDIVVTLRNEHASLPVDWTVPNVSHITVMPASGKIGPLSTQEVVVTFSPKSIGHHQRNVRVMYCKSLYSLLVYAIGWG-------EVATVPREKRRKGLEANVDDFAPQYKFV 362
BLAST of mRNA_M-pyrifera_M_contig114213.2964.1 vs. uniprot
Match: A0A7J6SJ98_PEROL (Chromosome X 22 n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SJ98_PEROL) HSP 1 Score: 75.5 bits (184), Expect = 2.620e-13 Identity = 46/131 (35.11%), Postives = 65/131 (49.62%), Query Frame = 1
Query: 4 LEVGRAKLWFGECPVGDYRDVLVTLRNPSATTEIAWHAEKIAHFATKPRRGTLLPNQTQKVVLTFKPRSLGPHKPTIHLCGEGDLVKVPIRLVGTATKPPPDLEAELRERNAKMRGPDADPATFSRRYQFV 396
L V + L FG CPVG+ RD+++TLRN A+ I W I H +P G + P TQ+VV+TF P+SLG H+ I + L V + +G E + G +A P F+ Y+FV
Sbjct: 239 LSVAPSSLDFGGCPVGERRDIVLTLRNEHASLPIDWAIPIICHINVRPAAGKIGPLSTQEVVVTFSPKSLGNHQRDISIMYCNKLYSVKVYAIGWG-------EVAGGPGQKQRHGLEAIPEDFAPEYKFV 362
BLAST of mRNA_M-pyrifera_M_contig114213.2964.1 vs. uniprot
Match: A0A225WDF7_9STRA (MSP domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDF7_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.800e-7 Identity = 38/122 (31.15%), Postives = 65/122 (53.28%), Query Frame = 1
Query: 31 FGECPVGDYRDVLVTLRNPSATTEIAWHAEKIAHFATKPRRGTLLPNQTQKVVLTFKPRSLGPHKPTIHLCGEGDLVKVPIRLVGTATKPPPDLEAELRERNAKMRGPDADPATFSRRYQFV 396
FG+ D D+L++L+N S + +AH++ PR G L Q+Q +V++F P LG + L GD++++P++++G A P A R + GP A PA F+ +Y+F+
Sbjct: 459 FGDIRSYDRADLLISLKNVSGLPVRFEVPKGVAHYSISPRTGRLDVLQSQSLVVSFAPTQLGTFNSILLLRINGDVLEIPVKVLGKAAAVGPVPPASER----LVGGPLALPADFAPKYKFL 576 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114213.2964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114213.2964.1 >prot_M-pyrifera_M_contig114213.2964.1 ID=prot_M-pyrifera_M_contig114213.2964.1|Name=mRNA_M-pyrifera_M_contig114213.2964.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp ALEVGRAKLWFGECPVGDYRDVLVTLRNPSATTEIAWHAEKIAHFATKPRback to top mRNA from alignment at M-pyrifera_M_contig114213:134..529- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114213.2964.1 ID=mRNA_M-pyrifera_M_contig114213.2964.1|Name=mRNA_M-pyrifera_M_contig114213.2964.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig114213:134..529- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114213:134..529- >mRNA_M-pyrifera_M_contig114213.2964.1 ID=mRNA_M-pyrifera_M_contig114213.2964.1|Name=mRNA_M-pyrifera_M_contig114213.2964.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig114213:134..529- (Macrocystis pyrifera P11B4 male)back to top |