mRNA_M-pyrifera_M_contig11421.2963.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: D7G767_ECTSI (Selenoprotein T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G767_ECTSI) HSP 1 Score: 234 bits (596), Expect = 3.330e-74 Identity = 116/171 (67.84%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 1 FVDTASL-ATRSSGAGSRAGTVPQVLVQYCVS*GMRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRLGVPEPFFVPVMRNNPISTVIGLSVVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPSGPMLLKELEKRGVR 510
F TASL A +GA G VPQVLVQ+CVS GMRRNFEELRSFLH HYP L +A S++GELYPPP AQ LAT+GS+ QVGGVA L GSLIFDRLGVP PFFVPVMR NP++T++GL+V NS C S +TGAFEVSIDG++VFSRL G+FP+G +LL+E EKRG+R
Sbjct: 132 FGGTASLGAVTGAGAVGSGGDVPQVLVQFCVSXGMRRNFEELRSFLHAHYPALAKAQSIRGELYPPPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLR 302
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: A0A7S2D3C0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3C0_9STRA) HSP 1 Score: 121 bits (303), Expect = 5.510e-32 Identity = 59/136 (43.38%), Postives = 91/136 (66.91%), Query Frame = 1
Query: 100 MRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRLGVPEPFFVPVMRNNPISTVIGLSVVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPSGPMLLKELEKRGV 507
M+RNF ELR+FL YP LQ + GE YPPP +A + +Q+GG+ + + GS IF+ LG+PEP + ++ N + G+ +NS+ +S T+TGAFEV +DG+VV+S+LE TGR P+G L++ +E++G+
Sbjct: 1 MKRNFVELRNFLAHRYPELQ--GKIAGENYPPPPYANLAVSAAGTVQMGGIVLMMFGSQIFNTLGMPEPEWYKELQENKMMAFCGVFFMNSMANSLTTTGAFEVLLDGEVVYSKLE-TGRMPNGRQLIELMEQKGI 133
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: A0A7S2V5G7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G7_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.700e-29 Identity = 59/153 (38.56%), Postives = 94/153 (61.44%), Query Frame = 1
Query: 64 PQVLVQYCVS*GMRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRLGVPEPFFVPVMRNNPISTVIGLSVVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPSGPMLLKELEKRGVRPAAR 522
PQV+V+YC M++NFEE++ FL YP L S+ G+ YP P + ++ +GS L + + +GGS +F ++G+PEP ++ +NN + IG+ +N + S+ TGAFEV +D D++FS+LE +FPS L L + G+RP A+
Sbjct: 131 PQVIVKYCPQSNMKKNFEEMQQFLEYRYPQL--VGSIHGQNYPLPFHIKVISKIGSSLHLLSLVFLMGGSFVFQKMGIPEPSWLDWAKNNRMQVFIGIFGINYVTSNMAKTGAFEVFLDDDLIFSKLE-MNKFPSVQDLQVGLAQFGLRPTAQ 280
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: A0A835Z5V2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V2_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.280e-24 Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 100 MRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRLGVPEPFFVPVMRNNPISTVIGLSVVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPSGPMLLKELEKRGVRP 513
M+ NF ELR FL YP L+ V G+ YPPPQ+AQT A++ LQ+ G L G L+F LG+ P ++ + + GL V+NS+ ++ +TGAFEV IDG++ SRL TG+FP +L+ + G+ P
Sbjct: 1 MKGNFLELRKFLEFTYPELR--GRVAGQHYPPPQWAQTAASLAQVLQLAGTISILAGGLVFGALGMEPPGAFAAVQEHKWPVIGGLFVLNSMANAALATGAFEVFIDGELALSRLA-TGQFPGRADILRAFAQHGLVP 135
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: A0A6S9L5H0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9L5H0_HETAK) HSP 1 Score: 99.8 bits (247), Expect = 1.470e-23 Identity = 56/140 (40.00%), Postives = 84/140 (60.00%), Query Frame = 1
Query: 100 MRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRLGVPEP-FFVPVMRNNPISTVIGLSVVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPSGPMLLKELEK-RGVRP 513
M+RNF EL+ FL YP L +V+G YPPP FA LA +G+ GG+A+T G +F +G+ P + M+ NP+ V GL +N++ F TGAFEV ++G+ VFS+LE +GRFP+ + +++ G+ P
Sbjct: 1 MQRNFIELQKFLEYSYPEL--VGNVQGTFYPPPPFALALANLGTLALWGGIALTFLGETLFRAVGLAAPPGWFQSMKANPMPVVGGLFALNAVAGGFAKTGAFEVYLNGETVFSKLE-SGRFPNAEDIYAGMKRVAGLNP 137
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: F0YLT9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLT9_AURAN) HSP 1 Score: 98.2 bits (243), Expect = 1.380e-22 Identity = 55/157 (35.03%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 34 SGAGSRAGTVPQVLVQYCVS*GMRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRLGVPEPFFVPVMRNNPISTVIGLSVVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPSGPMLLKELEKRG 504
+ G+RA +VLV+ C S G +RN+ ELR FL YP L+ SV E YPPP A QV VA+ LGG +F G P + + N + + + N++ + +TGAFE+ ++G++ FS+LE TGR PS +++ +++ G
Sbjct: 12 AAGGARANGDAEVLVKLCTSXGTQRNYLELRKFLEDAYPGLR---SVAAEQYPPPAVGVFAAQAAGMAQVACVALLLGGEKVFQLFGAATPGWYHSVAENKMMAFGAVWMANNVAAQMVATGAFEIHVNGELAFSKLE-TGRLPSAADVVRGMKRAG 164
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: A0A7S2PKB4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKB4_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.780e-22 Identity = 57/140 (40.71%), Postives = 85/140 (60.71%), Query Frame = 1
Query: 100 MRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRL----GVPEPFFVPVMRNNPISTVIGLSVVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPSGPMLLKELEKRGV 507
M RN+ +LR FL ++P L+ ++ G YPPP+FA L+ + LQ+ +A G I+ + G P P + P ++ NP+ V L + NS+ +S T+TGAFEV +DG VVFS+LE TGR PSGP +L+ + G+
Sbjct: 1 MSRNYVQLRQFLEQNFPELE--GNIHGSNYPPPEFAVYLSQLIGILQIFAMAAVFMGDAIWQFVPFMNGQP-PGWWPQVKENPMLVVCTLFMGNSIANSMTTTGAFEVLLDGVVVFSKLE-TGRMPSGPEILQVFKGAGL 136
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: A0A7S1BN41_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN41_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.750e-20 Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 1
Query: 100 MRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRL----GVPEPFFVPVMRNNPISTVIGLSVVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPSGPMLLKELEKRGVRP 513
MRRNF ELR FL +YP + +++ G PPP A A V LQ+ VA G +++ + G P P++ V+ N ++ + L VNS+ +S STGAFE+ +DG ++FS++E GR P+G ++K LE G P
Sbjct: 1 MRRNFLELRRFLLQNYPHVFSEENISGGTQPPPSNAMYFAQVTGTLQLIAVAFAFFGDSLWNIVPIWGGRPPPWWGIVLENK-VAVMCFLFCVNSMANSQLSTGAFEIDMDGKIIFSKME-AGRMPNGDDIVKALEGMGYSP 140
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: A0A7S2XS90_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS90_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 3.450e-17 Identity = 51/142 (35.92%), Postives = 79/142 (55.63%), Query Frame = 1
Query: 100 MRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRL----GVPEPFFVPVMRNNPISTVIGLS-VVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPSGPMLLKELEKRGVR 510
M RNF +L+ FL H+P L ++KG YP P +A + F+QV + G I++ + G P ++ M+ N IG+ ++ S+ S+ +TGAFEV +DG V++S+L TGR P+G LLK L + G+R
Sbjct: 1 MSRNFHQLKEFLEQHFPELANG-AIKGANYPAPAWATIASQAIMFMQVFTMMAVFTGDAIWNYIPFVQGAPSWYYS--MKQNSAVVFIGIFLIIPSVIQSYITTGAFEVMLDGAVIYSKLA-TGRMPNGNDLLKPLIQAGLR 138
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Match: T0RNF5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RNF5_SAPDV) HSP 1 Score: 84.3 bits (207), Expect = 6.680e-17 Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 70 VLVQYCVS*GMRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGVAVTLGGSLIFDRLGVPE--PFFVPVMRNNPISTVIGLSVVNSLCSSFTSTGAFEVSIDGDVVFSRLEHTGRFPS 468
V+V+YCVS G NF+E++++L HYP L V G PP + L T+ + Q G L G I L +P P FV R+N + GL +++S+ S ++TGAFEV ++G +VFS++ GR+P+
Sbjct: 37 VVVEYCVSCGYANNFKEVQTYLETHYPHL--IGRVTGGNASPPAWKYYLGTIVGYAQAVGFIFLLAGEHILSALNLPADMPLFVQT-RDNKFAVFAGLMLLSSISQSMSATGAFEVYLNGTLVFSKIR-MGRWPN 167 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11421.2963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11421.2963.1 >prot_M-pyrifera_M_contig11421.2963.1 ID=prot_M-pyrifera_M_contig11421.2963.1|Name=mRNA_M-pyrifera_M_contig11421.2963.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp MRRNFEELRSFLHMHYPVLQEADSVKGELYPPPQFAQTLATVGSFLQVGGback to top mRNA from alignment at M-pyrifera_M_contig11421:9120..9650- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11421.2963.1 ID=mRNA_M-pyrifera_M_contig11421.2963.1|Name=mRNA_M-pyrifera_M_contig11421.2963.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=531bp|location=Sequence derived from alignment at M-pyrifera_M_contig11421:9120..9650- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11421:9120..9650- >mRNA_M-pyrifera_M_contig11421.2963.1 ID=mRNA_M-pyrifera_M_contig11421.2963.1|Name=mRNA_M-pyrifera_M_contig11421.2963.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig11421:9120..9650- (Macrocystis pyrifera P11B4 male)back to top |