mRNA_M-pyrifera_M_contig114201.2959.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A5A8CZ36_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CZ36_CAFRO) HSP 1 Score: 161 bits (408), Expect = 2.720e-45 Identity = 80/125 (64.00%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 202 LFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSNV--LLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 570
LFATG QDGHVRVWD+R +RAVANVA HV GAGAVGD+ ++ ++++GAD VCV+D RRGF VR +EH+D++YSL V G + LSGAGDGTL AHD+ G PLWALGANEAAVRCI
Sbjct: 195 LFATGAQDGHVRVWDLRARRAVANVAVHVTEAGAGAVGDIGVCTATSPFDVVTSGADQRVCVLDSRRGFSVRWSMDEHRDYVYSLAVGGRIALSGAGDGTLLAHDVVAGRPLWALGANEAAVRCI 319
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A5A8DFF4_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DFF4_CAFRO) HSP 1 Score: 161 bits (408), Expect = 5.300e-44 Identity = 80/125 (64.00%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 202 LFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSNV--LLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 570
LFATG QDGHVRVWD+R +RAVANVA HV GAGAVGD+ ++ ++++GAD VCV+D RRGF VR +EH+D++YSL V G + LSGAGDGTL AHD+ G PLWALGANEAAVRCI
Sbjct: 340 LFATGAQDGHVRVWDLRARRAVANVAVHVTEAGAGAVGDIGVCTATSPFDVVTSGADQRVCVLDSRRGFSVRWSMDEHRDYVYSLAVGGRIALSGAGDGTLLAHDVVAGRPLWALGANEAAVRCI 464
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: L1IK44_GUITC (CAP-Gly domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IK44_GUITC) HSP 1 Score: 152 bits (385), Expect = 1.160e-40 Identity = 92/199 (46.23%), Postives = 116/199 (58.29%), Query Frame = 1
Query: 1 LVSGGRDGVAIAWDVRVGKRVGRMAGHKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVF---SPQ--SNVLLSAGADAAVCVMDPRRGFQVRHRFEEHK----DFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 570
LVSG RDGVA+ WDV K R+ GH GH+T++ L D F G QDG V+VWDVR +R + +AAHV +G+GAVG++V SP + +++AGAD V V+D R GFQ R F EHK DFIYSL +AG+++LSGAGDG L AHD+ G W LGAN+AAVRCI
Sbjct: 292 LVSGDRDGVAMLWDVEANKSR-RIPGHGGHITSLAWL---------------------------DGNTFLVGAQDGKVKVWDVREERFIHQIAAHVTQQGSGAVGNIVVRRTSPNMATTDVVTAGADCRVQVLDARSGFQPRFTFTEHKFNLEDFIYSLAMAGSIILSGAGDGMLLAHDVETGAVCWGLGANKAAVRCI 462
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A7S3ZD98_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZD98_9EUKA) HSP 1 Score: 134 bits (336), Expect = 3.100e-33 Identity = 63/126 (50.00%), Postives = 82/126 (65.08%), Query Frame = 1
Query: 193 DAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSNVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 570
+A +F TG QDGHVRVWD+R KR +AN+ HV G GAV L S + SAGAD +C+MD R+GFQ+RHR EH+DFIYS++ V+SG GDG+L+ H + LW + + AVRCI
Sbjct: 422 EASIFLTGAQDGHVRVWDLRAKREIANIPCHVNKNGTGAVAGLEVSSDLRTVASAGADRTICMMDARKGFQIRHRACEHRDFIYSVKAVDNYVVSGGGDGSLYCHSMTEDRVLWGVKPLQNAVRCI 547
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A2R6XUS1_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUS1_MARPO) HSP 1 Score: 128 bits (321), Expect = 5.050e-31 Identity = 82/197 (41.62%), Postives = 110/197 (55.84%), Query Frame = 1
Query: 1 LVSGGRDGVAIAWDVRVGKRVGRMAG-HKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLRED-AVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSP----QSNVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGA-NEAAVRCI 570
L+SG RDG +WD G+ V R H+GHVTAV L + + +P+ AGA +F TGGQDG ++VWD+RNK V A G GAV ++ F+ ++++A AD + ++PR F+ H F EHKDFIYSL + G ++ SGAGDG L HDL G L+ LGA N+ AVRCI
Sbjct: 403 LMSGSRDGEVFSWDATTGRAVLRCKNAHQGHVTAVECL-----RDVDSGKPDEPAETAGASLFSGCLGEIFVTGGQDGIIQVWDIRNKAPVHTFAVSRSEHGRGAVSNIGFTNIGARTPPLMITACADKIIRALEPRSSFRTVHTFAEHKDFIYSLHLCGPLMWSGAGDGKLLVHDLTNGRCLYGLGATNDGAVRCI 594
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A1Y1I2U3_KLENI (F-box and WD-40 domain protein 7 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2U3_KLENI) HSP 1 Score: 124 bits (312), Expect = 9.540e-30 Identity = 79/192 (41.15%), Postives = 102/192 (53.12%), Query Frame = 1
Query: 1 LVSGGRDGVAIAWDVRVGKRVGRMA-GHKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSNVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGA-NEAAVRCI 570
+VSG RDG I WD+ ++ H GHVTA+ S G+ + E LF TGGQDG +R WD R RAVA V HV G GAV + + ++V+++AGAD V V+DPR F+VR+ F+YSL VAG SG GDG++ HD+ G L+ LGA N AVRCI
Sbjct: 447 VVSGARDGCVILWDIGAAASSRQLKRAHVGHVTALVW-----------------SDAGGSPQSEERTNLFLTGGQDGFLRAWDGRTDRAVAEVPVHVAASGTGAVSSIRVA--ADVIVTAGADGMVRVLDPRASFRVRNSLTGPGGFLYSLHVAGRTAFSGGGDGSVLVHDILDGRTLYGLGAINNGAVRCI 619
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A388K4M7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4M7_CHABU) HSP 1 Score: 120 bits (301), Expect = 3.420e-28 Identity = 75/194 (38.66%), Postives = 101/194 (52.06%), Query Frame = 1
Query: 1 LVSGGRDGVAIAWDVRVGKRVGRMAG-HKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSN--VLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGAN-EAAVRCI 570
+ SG RDG + WD G + + G HKGH+T++ + P D S +F +GGQDG +RVWD+R K V V H G GA+ + S + +L++AGAD V V++PR F+ H F EH+DFIYSL + SGAGDG L HD++ G L+ LGA AVRCI
Sbjct: 493 MASGSRDGSLVIWDGAKGSAIWNITGAHKGHLTSLLWV-EEKPKAAVGPGETDTSQEEDGDGSGRLPCVFISGGQDGMLRVWDIREKLCVNEVPIHRTPTGTGAISCMAVSKTAAGPLLVTAGADRKVKVLEPRASFKTLHSFGEHRDFIYSLHTRNGLAFSGAGDGNLIVHDVSAGCMLYGLGATANGAVRCI 685
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A0M0JZ73_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JZ73_9EUKA) HSP 1 Score: 119 bits (299), Expect = 4.720e-28 Identity = 76/199 (38.19%), Postives = 104/199 (52.26%), Query Frame = 1
Query: 1 LVSGGRDGVAIAWDVRVGKRVGRMAGHKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVL---FATGGQDGHVRVWDVR---NKRAVANVAAHVGLEGAGAVGDLVFSPQSN---VLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 570
L S RDG ++WDV G + H GH TA LAAA+ A+ A + +L +GGQDG VR+WD+R + +A H G AV DL+ N +++S+GAD + +DPR Q H FE+H+DFIYSL G + +SGAGDG++ HDL G ++ LGAN AAVR +
Sbjct: 274 LASADRDGAVVSWDVTTGDAT-HLGAHGGHATA-----------LAAASYAEAGGGAAGVDGESGGLLPRGLVSGGQDGVVRLWDLRMTGSGKAAMETRVHTG-----AVNDLIAHKMPNGQPLVISSGADKRLLTLDPRMSLQAVHLFEDHRDFIYSLHAIGHIAISGAGDGSVLLHDLQQGKCMYGLGANRAAVRAL 455
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A833SLA3_PHYIN (WD domain G-beta repeat n=3 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SLA3_PHYIN) HSP 1 Score: 114 bits (284), Expect = 3.410e-26 Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 1
Query: 4 VSGGRDGVAIAWDVRVGKRVGRMAG-HKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGA--GAVGDLVFSPQS-NVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 570
V G RDG D++ K + + A H+GH T+V LG+ + E A F +GGQDG VRVWD R K A ++ H+ + GAVG L + NVL++AGAD + V+D R+ + V + F EH DFIYSL V + SGAG+G L HD G L+ LGANEAAVR I
Sbjct: 306 VCGDRDGGVQLIDLQTSKILRKHASAHRGHTTSV--LGS---------------------QSEETASCFFSGGQDGAVRVWDSRQKEATHSLELHIDPRSSKKGAVGFLCEPKEDPNVLITAGADGVINVLDKRQSYDVMYSFTEHLDFIYSLHVRSQLCFSGAGNGMLHVHDWKTGKLLYGLGANEAAVRAI 475
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A9U3F5_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9U3F5_PHYPA) HSP 1 Score: 113 bits (283), Expect = 8.880e-26 Identity = 75/196 (38.27%), Postives = 102/196 (52.04%), Query Frame = 1
Query: 1 LVSGGRDGVAIAWDVRVGKRVGRMAG-HKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFS----PQSNVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGAN-EAAVRCI 570
+VSG RDG I WD + ++ HKGHVTAV L T E ++ TGGQDG +R WD R + V + H GAV + S ++++AGAD ++ V++PR GF+ H H+DFIYSL VAG +V SG+GDG+L H+L G L+ LGA+ + AVRCI
Sbjct: 466 IVSGSRDGDVILWDTAHATPLLHVSSAHKGHVTAVECLEDTKNKT-----------------WEECREMYLTGGQDGILRAWDFRTRGPVHSAVLHRNAVTKGAVNSIAVSYTACGSGPIVVTAGADNSMKVLEPRMGFKALHTICTHRDFIYSLYVAGPLVWSGSGDGSLLVHELLTGQCLYGLGADSKGAVRCI 644 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114201.2959.1 >prot_M-pyrifera_M_contig114201.2959.1 ID=prot_M-pyrifera_M_contig114201.2959.1|Name=mRNA_M-pyrifera_M_contig114201.2959.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp LVSGGRDGVAIAWDVRVGKRVGRMAGHKGHVTAVTALGTPLPSTLAAAASback to top mRNA from alignment at M-pyrifera_M_contig114201:3..572- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114201.2959.1 ID=mRNA_M-pyrifera_M_contig114201.2959.1|Name=mRNA_M-pyrifera_M_contig114201.2959.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig114201:3..572- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114201:3..572- >mRNA_M-pyrifera_M_contig114201.2959.1 ID=mRNA_M-pyrifera_M_contig114201.2959.1|Name=mRNA_M-pyrifera_M_contig114201.2959.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig114201:3..572- (Macrocystis pyrifera P11B4 male)back to top |