prot_M-pyrifera_M_contig11418.2955.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11418.2955.1
Unique Nameprot_M-pyrifera_M_contig11418.2955.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length558
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11418.2955.1 vs. uniprot
Match: A0A6H5JAL8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAL8_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 9.500e-36
Identity = 135/196 (68.88%), Postives = 156/196 (79.59%), Query Frame = 0 
Query:  309 TMACDETTYSAVVHGCAQTRNWTAAERLLAEMREEGFTPNDACYYALLAAASKAGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGEAEVAEVFLQMSKTHGMDADASGCAMAIAAFGRGGRVDKALALLDRMRKSGPPPNLQCFNGAIEACAVTDDV 504
            +M CDETT+SA++HGCAQTR+W AA RLL EM   G  PNDACYY LL AA +AGEL             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GEAE+AE+ L+M ++ G++ D  G + A+ AFGRGGR DKALAL+D +R++G PPNLQCFNGAIEACA+ DD+
Sbjct: 1059 SMPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMCKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAEIAEILLEMMRSQGVELDDVGRSHALVAFGRGGRPDKALALMDNIRENGSPPNLQCFNGAIEACALADDI 1254
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11418.2955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAL8_9PHAE9.500e-3668.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 358..378
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 9..95
coord: 101..226
coord: 208..391
coord: 431..553
coord: 278..430
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 435..556
e-value: 1.5E-20
score: 76.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 327..434
e-value: 2.8E-25
score: 90.7
coord: 212..326
e-value: 5.2E-29
score: 102.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..97
e-value: 5.9E-18
score: 67.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 98..211
e-value: 1.7E-29
score: 105.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 352..395
e-value: 2.3E-5
score: 24.4
coord: 401..430
e-value: 0.0084
score: 16.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 279..325
e-value: 5.7E-8
score: 32.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 460..483
e-value: 0.0015
score: 18.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 176..208
e-value: 0.0023
score: 16.0
coord: 213..245
e-value: 2.5E-4
score: 19.0
coord: 385..418
e-value: 8.5E-5
score: 20.5
coord: 142..175
e-value: 8.8E-6
score: 23.6
coord: 281..307
e-value: 1.3E-5
score: 23.1
coord: 351..383
e-value: 3.6E-5
score: 21.7
coord: 106..139
e-value: 3.1E-4
score: 18.7
coord: 70..97
e-value: 6.1E-5
score: 20.9
coord: 458..487
e-value: 1.5E-5
score: 22.8
coord: 316..348
e-value: 5.9E-8
score: 30.4
coord: 246..279
e-value: 8.7E-4
score: 17.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..30
score: 7.158
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 209..243
score: 9.624
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 383..417
score: 9.986
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 313..347
score: 12.332
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 348..382
score: 10.424
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 104..138
score: 11.038
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 174..208
score: 10.479
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 31..65
score: 10.534
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 279..309
score: 8.55
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 452..486
score: 10.457
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 522..556
score: 8.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 487..521
score: 8.561
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 139..173
score: 10.654
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 244..278
score: 10.501
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 66..100
score: 9.306
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 108..274
e-value: 5.3E-14
score: 52.1
coord: 14..96
e-value: 5.1E-7
score: 29.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11418contigM-pyrifera_M_contig11418:1383..9641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11418.2955.1mRNA_M-pyrifera_M_contig11418.2955.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11418 1383..9641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11418.2955.1 ID=prot_M-pyrifera_M_contig11418.2955.1|Name=mRNA_M-pyrifera_M_contig11418.2955.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=558bp
FVTLTALRACNNWEKAEEILSMMKSRAIKPNEVTYTELISICGRSGDVHQ
ALSQLENARREGLAPNLINYNCCVDVCAKTGEVDRALALLEQMQTCGDPA
LTPDLVTYNSVINACAKAGDWALTLWLLSEIKTAGLKADIQSFNAALDAC
TKGSNPEAALALMQRMRAQGLTPDAISYQSAISACRAKGDGASAVKLLKE
MEEEGLAPQDSDYKLVIEAVGREGDWGGALELLETMKAEGVQPDAYSYGA
AVGACAKGRNPEMATKLLREMQELGQQPTRFCWNAIINVHARMGMTEDAL
ALMDEMKLTMACDETTYSAVVHGCAQTRNWTAAERLLAEMREEGFTPNDA
CYYALLAAASKAGELKLAERLLERMRAEGLPPDLYAYSTVFGGCGRFHEW
RLAMRLLELMRSEDISPTRKIFNSALRACGSGEAEVAEVFLQMSKTHGMD
ADASGCAMAIAAFGRGGRVDKALALLDRMRKSGPPPNLQCFNGAIEACAV
TDDVDGGLSLMAEMGRCGVEPDKDSFGPLVAACGRNGNTALAGDLYGAMA
KLGLELR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long