mRNA_M-pyrifera_M_contig114172.2954.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: A0A7S4M3H8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M3H8_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 5.170e-21 Identity = 47/127 (37.01%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 13 DRDGLPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKAPVASVVEKGRQAKRL-MGDGKIVNWIYFATMKYFPAKTLINLTFRGDRCNDP 390
DRD L WHK ++++GDAAHAM+P++GQG N A+IDGFL+ ++IS +L+++ + I S L +F +E +RK + + +GR L + G I +W + + + P L + F+ D N+P
Sbjct: 277 DRDPLDCWHKGRVVLLGDAAHAMNPFAGQGANMAIIDGFLLGSLIS-SLSKNFEDKIPTSELSNMFDHYEKLRKPAATANLNQGRSTANLTLNSGTIKSWCFRTAISWLPNSLLSSFLFKADEQNNP 402
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: UPI0003713144 (FAD-dependent monooxygenase n=1 Tax=Salsuginibacillus kocurii TaxID=427078 RepID=UPI0003713144) HSP 1 Score: 73.2 bits (178), Expect = 1.360e-12 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 13 DRDGLPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKAPVASVVEKGRQAKRLMGDGK 297
D + LP WH D +++IGDAAHA+SP SGQG + A+ D +AT++++A D + LF ++E+ R+ V +V GR+ MGDGK
Sbjct: 283 DIETLPAWHTDRVVLIGDAAHAVSPNSGQGASLALEDAMYLATLLNQA----------DKTISQLFNQYEEDRRPRVEKIVADGRR----MGDGK 363
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: A0A815I0N0_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815I0N0_9BILA) HSP 1 Score: 73.2 bits (178), Expect = 1.370e-12 Identity = 36/98 (36.73%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 13 DRDGLPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKAPVASVVEKGRQAKRLMGDGKIVN 306
DRD LP+W+K+ +++IGDAAH SP+ GQG N AM D + + M+ A ++S S L+ +FQ+F D R+ +V++ R+ G+ +++N
Sbjct: 281 DRDELPIWYKERVILIGDAAHGTSPHVGQGGNLAMEDAYYLTKMLP---ASGESYSLSTSTLKTIFQQFTDRRRPRTTEIVKRARKE----GEDRVLN 371
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: A0A2E7EJ92_9PLAN (Monooxygenase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7EJ92_9PLAN) HSP 1 Score: 71.2 bits (173), Expect = 6.110e-12 Identity = 36/105 (34.29%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 1 TVLSDRDGLPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKAPVASVVEKGRQAKRLM-GDGKIVNWI 312
T D L W+KD +L+IGDAAHA SPY+G G A+ D +A +++ SD +++++FQ+F+DVRK +++++ R + G ++ NWI
Sbjct: 258 TKAGDLLALTPWYKDRILLIGDAAHATSPYAGMGACAAIADAHFLAQLLA-----------SDQSIESVFQQFQDVRKPIADAIIKESRHGLEMSSGRSRLKNWI 351
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: A0A365Y3A9_9BACT (Monooxygenase n=2 Tax=Chitinophaga TaxID=79328 RepID=A0A365Y3A9_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 9.030e-12 Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 7 LSDRDGLPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKAPVASVVEKGRQ---AKRLMG--DGKIVNWIYFATMKYFPAK 345
+SD LP WHKD +L+IGDAAHA+SP +GQG + A+ D +A ++ A S A F+KFE+ RK V +V +GR+ K ++ KI W+ + F AK
Sbjct: 281 VSDIASLPTWHKDRVLLIGDAAHAVSPNAGQGASMALEDAMYLAMLLRDAGVGS---------YAAAFRKFENDRKPRVEKIVAEGRRRGATKTILKPWQAKIREWLMALLIPLFAAK 389
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: A0A2N8MC15_9HYPH (FAD_binding_3 domain-containing protein n=1 Tax=Beijerinckiaceae bacterium TaxID=1978229 RepID=A0A2N8MC15_9HYPH) HSP 1 Score: 70.5 bits (171), Expect = 1.260e-11 Identity = 51/138 (36.96%), Postives = 73/138 (52.90%), Query Frame = 1
Query: 1 TVLSDRDGLPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKA--PVASVVEKGRQAKRLMGDGKIVN------WIYFATMKYFPAKTLINLTFRGDRCNDP 390
TV+ DR LP+WHK +L IGDAAHAMSP G G+N A+ D A ++ AL S +SD L + ++ E K + V++K ++ L G GKI +IYF ++ PA+ L+ L R +R P
Sbjct: 275 TVVVDR--LPLWHKPGLLCIGDAAHAMSPVGGVGINLAIQDAIAAANIL--ALPLSGEGPLSDQLLAQVQKRREWPTKVIQAIQVVIQKRIISRVLGGTGKIAPPRFLRLFIYFPILRRLPAR-LVGLGVRRERVTSP 407
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: A0A8J7MG53_9BACT (FAD-dependent monooxygenase n=1 Tax=Aureispira sp. TaxID=1872660 RepID=A0A8J7MG53_9BACT) HSP 1 Score: 69.7 bits (169), Expect = 2.260e-11 Identity = 39/126 (30.95%), Postives = 58/126 (46.03%), Query Frame = 1
Query: 13 DRDGLPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKAPVASVVEKGRQA-KRLMGDGKIVNWIYFATMKYFPAKTLINLTFRGDRCND 387
DR WH + ++IGDAAH M+P+ G G NTA+ D F++ +I S + ++ +F FE RK P+ +V+ R + K NWI M P L + D+ ND
Sbjct: 271 DRPPAKTWHSNRAILIGDAAHPMTPFLGAGANTAIADAFILGHLIK-----------SSTDIKTVFSTFEKRRKVPLEKMVKTARTVCDYSLSKSKWKNWIMLKGMAILPKFLLRRMILSADKIND 385
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: A0A7G8G4P7_9SYNE (FAD binding domain protein n=1 Tax=Synechococcus sp. ROS8604 TaxID=1442557 RepID=A0A7G8G4P7_9SYNE) HSP 1 Score: 65.9 bits (159), Expect = 9.770e-11 Identity = 37/115 (32.17%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 1 TVLSDRDGLPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKAPVASVVEKGRQAKRLMGDGKIVNWIYFATMKYFPAK 345
T D L W++D +L+IGDAAHA SPY+G G +A+ D +A +++ S ++ A+FQ+F+ VRK SV+++ R+ + G + W+ K P K
Sbjct: 67 TQAGDLLALSPWYRDRVLMIGDAAHATSPYAGMGACSAIADAAFLADLMA-----------SGRSVPAIFQEFQVVRKHAADSVIKESRRGLDVSTYGDLKGWVRDWMFKNMPEK 170
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: Q0I9Q9_SYNS3 (FAD-dependent monooxygenase, putative n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=Q0I9Q9_SYNS3) HSP 1 Score: 67.8 bits (164), Expect = 1.040e-10 Identity = 40/117 (34.19%), Postives = 59/117 (50.43%), Query Frame = 1
Query: 1 TVLSDRDGLPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKAPVASVVEKGRQAKRLMGDGKIVNWIYFATMKYFPAKTL 351
T D L W++D +L+IGDAAHA SPY+G G +A+ D L+A +I+ S ++ A+FQ F+ VRK SV++ R+ L G + W+ P K L
Sbjct: 258 TQAGDLLALSPWYRDRVLMIGDAAHATSPYAGMGACSAIADASLLADLIA-----------SGRSVPAIFQDFQAVRKPAADSVIKDSRRGLDLSTCGDLKGWVRDWMFTNMPEKKL 363
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Match: A0A4U9VQH9_9SPHI (Salicylate hydroxylase n=1 Tax=Sphingobacterium thalpophilum TaxID=259 RepID=A0A4U9VQH9_9SPHI) HSP 1 Score: 67.4 bits (163), Expect = 1.480e-10 Identity = 41/121 (33.88%), Postives = 64/121 (52.89%), Query Frame = 1
Query: 25 LPMWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTISDSALQALFQKFEDVRKAPVASVVEKGRQAKRLMGDGKIVNWIYFATMKYFPAKTLINLTFRGDRCND 387
LP W++D +L+IGDAAHA+SP SGQG + A+ D L+A ++ + +L F+KFED R+ V +V +GR+ G+ K+V + + + +NL G ND
Sbjct: 283 LPNWYRDRLLLIGDAAHAVSPNSGQGASLALEDAMLLAKLLR-----------DEKSLALAFRKFEDGRRPRVERIVREGRRR----GEDKLVVGPAMQLFREWMIRIFVNLF--GSNGND 386 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114172.2954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114172.2954.1 >prot_M-pyrifera_M_contig114172.2954.1 ID=prot_M-pyrifera_M_contig114172.2954.1|Name=mRNA_M-pyrifera_M_contig114172.2954.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp MWHKDHMLVIGDAAHAMSPYSGQGVNTAMIDGFLIATMISKALARSPVNTback to top mRNA from alignment at M-pyrifera_M_contig114172:6..395+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114172.2954.1 ID=mRNA_M-pyrifera_M_contig114172.2954.1|Name=mRNA_M-pyrifera_M_contig114172.2954.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig114172:6..395+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114172:6..395+ >mRNA_M-pyrifera_M_contig114172.2954.1 ID=mRNA_M-pyrifera_M_contig114172.2954.1|Name=mRNA_M-pyrifera_M_contig114172.2954.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig114172:6..395+ (Macrocystis pyrifera P11B4 male)back to top |