mRNA_M-pyrifera_M_contig11416.2949.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: A0A6H5JIK9_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK9_9PHAE) HSP 1 Score: 380 bits (976), Expect = 1.790e-130 Identity = 197/265 (74.34%), Postives = 217/265 (81.89%), Query Frame = 1
Query: 10 GVSKAYCGTKDDMRRLVDTLAELDPLDKPLTATELSGRWELAYTTVELFRASPFFQMVEAGYDNPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVD------SSGGEKSATAEGEGEG----GTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLTGNNNEVVELTVESTKLKAVEDVPLLPLAGSFFEGKDFPTGDAAKMVMGNVPVTKQTVAYVDGGMRVMRDKAGELYIYVR 774
GVS AY GTKDDMR LV++LA+LDP++KPLTATELSGRWEL YTTVELFRASPFFQMVEAGYD+PEKSNLFFKLHQLQTGSWGAS IGR+TQTLDLIDSVP +++ + E A A G EG G +GGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIAT+A C L G+NNEVV+L VESTKLKAVEDVPLLP+AG FEG +FPTG+ K VMGNVPVTKQTV Y+D +RVM DKAGELYIY R
Sbjct: 40 GVSHAYLGTKDDMRLLVESLAQLDPVNKPLTATELSGRWELVYTTVELFRASPFFQMVEAGYDDPEKSNLFFKLHQLQTGSWGASKIGRVTQTLDLIDSVPPSIEGRDATATPAAEAEAAAAGAVEGSDKAGVVEDNTDMSGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATKAKCSLAGDNNEVVQLIVESTKLKAVEDVPLLPIAGPLFEGMEFPTGEVTKKVMGNVPVTKQTVVYIDDTLRVMEDKAGELYIYAR 304
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: A0A0G4EA07_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA07_VITBC) HSP 1 Score: 176 bits (446), Expect = 7.780e-50 Identity = 97/247 (39.27%), Postives = 142/247 (57.49%), Query Frame = 1
Query: 37 KDDMRRLVDTLAELDPLDKPLTATELSGRWELAYTTVELFRASPFFQMVEAGYDNPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVDSSGGEKSATAEGEGEGGTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLTGNNNEVVELTVESTKLKAVEDVPLLPLAGSFF-EGKDFPTGDAAKMVMGNVPVTKQTVAYVDGGMRVMRDKAGELYIYVR 774
K+ + +VD L+ P D + L+G W L Y + +LFR+SPFF ++A YD+ +K++LFFKLH+LQT SWG S I ++ QTL L T G L S+ ++ +LP T VPLVG+WKLLPTFGG + + AN ++G+ N+ ++LTV+ TK+KA ED+PL+PL G F E + K + G+VP + T +VD GMR+ +D GE+++YVR
Sbjct: 82 KEQISNVVDDLSSRGPFD--CSPGMLNGSWVLVYASAQLFRSSPFFLSIQASYDDSKKASLFFKLHELQTRSWGFSEIAQVGQTL-LFPEANST------------------------------DGRLRSDFNIKVLPSTVVPLVGWWKLLPTFGGNVRSIANASISGDANQHLDLTVDLTKVKASEDLPLMPLLGQFLAEQTGIRVSNVWKRLRGSVPTARVTHVFVDSGMRIAKDSQGEVFVYVR 295
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: A2C2Q8_PROM1 (PAP_fibrillin domain-containing protein n=6 Tax=Prochlorococcus TaxID=1218 RepID=A2C2Q8_PROM1) HSP 1 Score: 143 bits (361), Expect = 2.920e-38 Identity = 83/256 (32.42%), Postives = 136/256 (53.12%), Query Frame = 1
Query: 13 VSKAYCGTKDDMRRLVDTLAELDPLDKPLTATELSGRWELAYTTVELFRASPFFQMVEAGYDNPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVDSSGGEKSATAEGEGEGGTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLTGNNNEVVELTVESTKLKAVEDVPLLPLAGSFFEGKDFPTGDAAKMVMGNV--PVTKQTVAYVDGGMRVMRDKAGELYIYVR 774
++ Y ++M++LV+ +L PL +T + + G WEL Y++VELFR+SPFF +E ++ KS+LFFKLH LQ GS+G S++GR+ Q L+ G + S D I LT++P++G++KLLPTFGG + T AN + NN ++ + +E TK+ V+ + +P S + +P + K++ N P + +V YVD +R++RD G L++Y+R
Sbjct: 28 IAPMYQNKLEEMKKLVE---DLQPLSDEITQSSIEGEWELIYSSVELFRSSPFFLAIEKALNDKSKSDLFFKLHLLQVGSFGLSTVGRVGQYLNFT------------------------------------KGEMISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLANKLQLKNN--ILSMELEKTKVSEVDGLGKIPFVNSILMERWYPVKNVWKLLPWNKENPNCEISVIYVDKDLRIIRDMHGALFVYIR 242
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: A0A4D9CZF7_9STRA (PAP_fibrillin domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF7_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.190e-37 Identity = 86/253 (33.99%), Postives = 131/253 (51.78%), Query Frame = 1
Query: 25 YCGTKDDMRRLVDTL-AELDPLDKPLTATELSGRWELAYTTVELFRASPFFQMVEAGYDNPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVDSSGGEKSATAEGEGEGGTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLTGNNNEVVELTVE----STKLKAVEDVPLLPLAGSFFEGKDFPTGDAAKMV----MGNVPVTKQTVAYVDGGMRVMRDKAGE 756
Y ++ M L++ L A+ + ++ L G WEL Y+T +LFR+SPFFQ +E Y +P KS LFFKLH+LQT SWGAS IGR+ QT+DL + +L S D ++ PLT++PL+G++KLLPTFGG + + A+ + + + L +E T K + + +PL G++ E K FPT +A ++ G+ P V Y+D R++R+ GE
Sbjct: 43 YAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQ------------------------------------AQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVLSLADGLTVSESAQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGSGPRCLVEVVYLDEDFRIVREGGGE 259
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: A0A0M0J5S5_9EUKA (Pili assembly chaperone n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J5S5_9EUKA) HSP 1 Score: 142 bits (359), Expect = 1.310e-37 Identity = 94/280 (33.57%), Postives = 136/280 (48.57%), Query Frame = 1
Query: 4 STGVSKAYCGTKDDMRRLVDTLAELDPLDKPLTATELSGRWELAYTTVELFRASPFFQMVEA---------------GYDNPE-KSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVDSSGGEKSATAEGEGEGGTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLTGNNNEVVELTVESTKLKAVEDVPLLPLAGSFFEGKDFPTGDAAKMVM-------GNVPVTKQTVAYVDGGMRVMRDKAGELYIYVR 774
+T ++ AY +DDM LV LAE P+TA L+G WEL ++ VELFR+SPFF +E G D+P+ K+ +FFKLH LQ SWG S++GR+ QT+D+ EK G ES D I LT +PL+G++KLLPTFGG + T A+ V+ ++ + + ++ T++ VP +PL F + +P K++ G P YVD MR+ RD AG ++IY R
Sbjct: 41 NTLIAPAYQEKRDDMSLLVSQLAERQ--SAPVTAAALNGEWELVFSEVELFRSSPFFLAIEEALNSSPGIPTLGRWLGADDPKRKAEIFFKLHALQVLSWGLSTVGRVAQTIDV-------------EK-----------------------GRFESSFDTTIFGLTVIPLLGWFKLLPTFGGRVVTEADAVVLEDDG-TLRMELQRTRVITAPGVPRIPLVDGIFMDRWYPVSSVWKLLPWNGGPFEGRAPTCSVQTVYVDEQMRISRDGAGAVFIYTR 281
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: W7T369_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T369_9STRA) HSP 1 Score: 142 bits (358), Expect = 7.180e-37 Identity = 86/253 (33.99%), Postives = 131/253 (51.78%), Query Frame = 1
Query: 25 YCGTKDDMRRLVDTL-AELDPLDKPLTATELSGRWELAYTTVELFRASPFFQMVEAGYDNPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVDSSGGEKSATAEGEGEGGTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLTGNNNEVVELTVE----STKLKAVEDVPLLPLAGSFFEGKDFPTGDAAKMV----MGNVPVTKQTVAYVDGGMRVMRDKAGE 756
Y ++ M L++ L A+ + ++ L G WEL Y+T +LFR+SPFFQ +E Y +P KS LFFKLH+LQT SWGAS IGR+ QT+DL + +L S D ++ PLT++PL+G++KLLPTFGG + + A+ + +++ L +E T K + + +PL G++ E K FPT +A ++ G P V Y+D R++R+ GE
Sbjct: 114 YAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQ------------------------------------AQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGGE 330
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: A0A7S1UDK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDK1_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.020e-36 Identity = 86/233 (36.91%), Postives = 118/233 (50.64%), Query Frame = 1
Query: 94 PLTATELSGRWELAYTTVE--LFRASPFFQMVEAGYDNPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVDSSGGEKSATAEGEGEGGTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLT--GNNNEVVELTVESTKLKAVEDVPLLPLAGSFFEGKDFPTGDAAKMVMGNVPVTKQTV--AYVDGGMRVMRDKAGELYIYVR 774
P + L G WEL YT+V+ +FR+SPFF +E YDN E SNLFFKLH+LQT SWG S++GR+ Q D + + SE D + LT++P+VGF+KLLPTFGGC+ T + T G + V E+ V+ T+ K V +P LP+ G + P GD + + N K V Y+D R+ DK GEL++Y R
Sbjct: 115 PTDLSALDGEWELIYTSVKHGIFRSSPFFLAIEEAYDNEELSNLFFKLHELQTCSWGVSTVGRVAQVWDSEAKM------------------------------------MYSEFDTSLFGLTTIPIVGFFKLLPTFGGCVRTESKVTSTEIGPDGRV-EMEVDLTRAKEVPGLPPLPILGDRVYDIEVPVGDIWEKLPWNKGPAKCAVNIVYLDDDFRIAADKYGELFVYTR 310
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: A0A7S0VCJ3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VCJ3_9CRYP) HSP 1 Score: 139 bits (350), Expect = 7.450e-36 Identity = 90/264 (34.09%), Postives = 124/264 (46.97%), Query Frame = 1
Query: 52 RLVDTLAELDPLDKPLTATELSGRWELAYTTVELFRASPFFQMVEAGYDNP----------------EKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVDSSGGEKSATAEGEGEGGTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLTGNNNEVVELTVESTKLKAVEDVPLLPLAGSFFEGKDFPTGDAAKMVM-------GNVPVTKQTVAYVDGGMRVMRDKAGELYIYVR 774
++ D +L+P+ K +T L G WELAY VELFR+SPFF +E D +KS +FFKLHQLQ SWGAS++GRI Q +D EK G ESE D +I LT +P++G++KLLPTFGG + T A+ + N +EL T++ V LP F K +P + K++ G P TV YVD MR+ +D +G L++Y R
Sbjct: 97 QIADLATKLEPMSKDITEEALKGEWELAYADVELFRSSPFFLAIERALDTSPGIPWLGKALGITDPTKKSAMFFKLHQLQVLSWGASTVGRIGQRIDF-------------EK-----------------------GEFESEFDTVIFGLTVIPILGWFKLLPTFGGRVVTLADALKLEGNEMTMELA--KTQVVTCPGVKRLPFLDGIFMDKWYPVREVWKLLPWNGGPFDGRAPECAVTVTYVDETMRLTKDMSGALFVYTR 322
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: A0A7S2Q3B1_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q3B1_9DINO) HSP 1 Score: 136 bits (342), Expect = 1.390e-35 Identity = 83/255 (32.55%), Postives = 128/255 (50.20%), Query Frame = 1
Query: 25 YCGTKDDMRRLVDTLAELDPLDKPLTATELSGRWELAYTTVE--LFRASPFFQMVEAGYDNPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVDSSGGEKSATAEGEGEGGTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLTGNNNEVVELTVESTKLKAVEDVPLLPLAGSFFEGKDFPTGD---AAKMVMGNVPVTKQTVAYVDGGMRVMRDKAGELYIYVR 774
Y + R L++ + P P + E+ G WEL ++TV+ +FR+SPFF V+ ++S+LFFKLH+LQ SWG S +GR+ Q ++ + G L SE D +L LT++P++GFWKLLPTFGGC+ T ++ G N + +++ V+ T+ + V +P PLAG+ G+ P A G PV + Y+D MR++ D GEL++Y R
Sbjct: 20 YAERMETARSLIEEIISEAP-PPPTSLAEIDGEWELVFSTVKHGIFRSSPFFLAVQEALGGRDQSDLFFKLHELQVMSWGISKVGRVAQYINSTE------------------------------------GKLYSEFDTSLLSLTTIPIIGFWKLLPTFGGCVVTASD---VGLNGDRLDMEVQWTEAREVPGLP--PLAGAIL-GQRVPVNSIWQALPWNEGRRPVCSVALRYLDEDMRIVADNDGELFVYTR 231
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Match: A0A061RCL2_9CHLO (Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RCL2_9CHLO) HSP 1 Score: 138 bits (347), Expect = 1.720e-35 Identity = 86/260 (33.08%), Postives = 124/260 (47.69%), Query Frame = 1
Query: 13 VSKAYCGTKDDMRRLVDTLAELDPLDKPLTATELSGRWELAYTTVELFRASPFFQMVEAGYDNPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSVPRTVDSSGGEKSATAEGEGEGGTTALEATSAGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATRANCVLTGNNNEVVELTVESTKLKAVEDVP---LLPLAGSFFEGKDFPTGDAAKMVM---GNVPVTKQTVAYVDGGMRVMRDKAGELYIYVR 774
VS AY G + + L+ L + + ++G WEL Y+T +LFR+SPFF ++A + + EKS LFFKLH LQ SWGAS++GR+ Q +D S SE D II LT VP+ G++KLLPTFGG + + A + +++ ++ T+++A +P LP+ G DFP K + G P TV YVD R+M D GEL++Y R
Sbjct: 89 VSDAYEGKRQKILELIQELCSRKT-ESRFEKSMIAGEWELVYSTCQLFRSSPFFMAIQAAFADKEKSALFFKLHDLQVKSWGASTVGRVAQNIDFE------------------------------------SNQFRSEFDTIIFALTVVPIFGWFKLLPTFGGRVISYAEDLEFDIETGRLDMELKRTRVEAAPGIPNIKKLPVLGRALMDNDFPVSRVWKSLPWNGGRAPKCSVTVKYVDDTFRIMEDPDGELFVYSR 311 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11416.2949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11416.2949.1 >prot_M-pyrifera_M_contig11416.2949.1 ID=prot_M-pyrifera_M_contig11416.2949.1|Name=mRNA_M-pyrifera_M_contig11416.2949.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=259bp ASTGVSKAYCGTKDDMRRLVDTLAELDPLDKPLTATELSGRWELAYTTVEback to top mRNA from alignment at M-pyrifera_M_contig11416:3341..6651- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11416.2949.1 ID=mRNA_M-pyrifera_M_contig11416.2949.1|Name=mRNA_M-pyrifera_M_contig11416.2949.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3311bp|location=Sequence derived from alignment at M-pyrifera_M_contig11416:3341..6651- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11416:3341..6651- >mRNA_M-pyrifera_M_contig11416.2949.1 ID=mRNA_M-pyrifera_M_contig11416.2949.1|Name=mRNA_M-pyrifera_M_contig11416.2949.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1554bp|location=Sequence derived from alignment at M-pyrifera_M_contig11416:3341..6651- (Macrocystis pyrifera P11B4 male)back to top |