mRNA_M-pyrifera_M_contig11401.2911.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11401.2911.1 vs. uniprot
Match: D8LJ65_ECTSI (tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ65_ECTSI) HSP 1 Score: 145 bits (365), Expect = 6.510e-39 Identity = 81/131 (61.83%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 1 SCSGFAWPLSPSVANVGQGIRSG-DGRQSTVAAMTTPRGRLLAATTDGGGATTAVATEGVRRKVVKPWLTKAQETVDYSNVEAMYVRHILVQTEAIAKMCLNQLRDGADFAELASSISDCQATRTKGGEVG 390
SC+ + L P+ G+ D RQ+T AA GR L A + G+TT VAT+ R+KVVKPW TKAQETVDYSNVEAMYVRHILVQTE +AK CL Q+R+GADF ELASSISDCQATR KGGE+G
Sbjct: 22 SCAATGFTLPPTTPRTGRATAGARDVRQATPAAEPPRAGRPLFADSSSDGSTT-VATQPKRKKVVKPWFTKAQETVDYSNVEAMYVRHILVQTEGLAKTCLEQIREGADFGELASSISDCQATRAKGGEIG 151
BLAST of mRNA_M-pyrifera_M_contig11401.2911.1 vs. uniprot
Match: A0A6H5KNX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX7_9PHAE) HSP 1 Score: 142 bits (357), Expect = 9.940e-37 Identity = 82/131 (62.60%), Postives = 95/131 (72.52%), Query Frame = 1
Query: 1 SCSGFAWPLSPSVANVGQGIRSG-DGRQSTVAAMTTPRGRLLAATTDGGGATTAVATEGVRRKVVKPWLTKAQETVDYSNVEAMYVRHILVQTEAIAKMCLNQLRDGADFAELASSISDCQATRTKGGEVG 390
+ +GF P P+ A G+ D RQ+T AA + GR L A + G+T AVAT+ R+KVVKPW TKAQETVDYSNVEAMYVRHILVQTE +AK CL Q+R+G DF ELASSISDCQATR KGGEVG
Sbjct: 25 AATGFTLP--PTTARTGRATAGPRDVRQATPAAEPSRGGRPLFADSSSDGST-AVATQPKRKKVVKPWFTKAQETVDYSNVEAMYVRHILVQTEGLAKTCLEQIREGVDFGELASSISDCQATRAKGGEVG 152
BLAST of mRNA_M-pyrifera_M_contig11401.2911.1 vs. uniprot
Match: A0A7S1KF02_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KF02_9ALVE) HSP 1 Score: 63.9 bits (154), Expect = 2.460e-9 Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 187 VVKP-WL-TKAQETVDYSNVEAMYVRHILVQTEAIAKMCLNQLRDG-ADFAELASSISDCQATRTKGGEVG 390
+VKP W T+AQE VD V+A+ V HIL++TE++A++ L +LR G DFA+LA S CQAT+ G+VG
Sbjct: 88 LVKPGWFPTRAQEVVDTRTVQAVRVSHILLETESLAELALERLRQGDVDFADLAEVASICQATKQDKGQVG 158
BLAST of mRNA_M-pyrifera_M_contig11401.2911.1 vs. uniprot
Match: A0A0G4ERE5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC) HSP 1 Score: 63.9 bits (154), Expect = 2.750e-9 Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 187 VVKP-WL-TKAQETVDYSNVEAMYVRHILVQTEAIAKMCLNQLRDG-ADFAELASSISDCQATRTKGGEVG 390
+VKP W T+AQE VD V+A+ V HIL++TE++A++ L +LR G DFA+LA S CQAT+ G+VG
Sbjct: 28 LVKPGWFPTRAQEVVDTRTVQAVRVSHILLETESLAELALERLRQGDVDFADLAEVASICQATKQDKGQVG 98
BLAST of mRNA_M-pyrifera_M_contig11401.2911.1 vs. uniprot
Match: A0A7S1HKL2_HEMAN (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HKL2_HEMAN) HSP 1 Score: 60.8 bits (146), Expect = 5.130e-9 Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 193 KPWLTKAQETVDYSNVEAMYVRHILVQTEAIAKMCLNQLRDGADFAELASSISDCQATRTKGGEVG 390
K W + ++ V ++ V HILV T +A + QLR+GADFA LAS+IS C+ TR KGGEVG
Sbjct: 94 KKWFEETEKQRQ-GKVVSVRVSHILVSTSEMASTLMTQLREGADFAGLASAISMCEGTREKGGEVG 158
BLAST of mRNA_M-pyrifera_M_contig11401.2911.1 vs. uniprot
Match: A0A7S2S7D0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7D0_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 5.280e-7 Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 193 KPWL-TKAQETVDYSNVEAMYVRHILVQTEAIAKMCLNQLRDGADFAELASSISDCQATRTKGGEVG 390
K W TK + ++ +V A+ V H+L+ T+ +A CL Q++ G DF +LA +IS C+ +R +GG++G
Sbjct: 47 KEWYPTKISQVIESKDVMAVRVSHVLLHTKEMATACLEQVKSGRDFNDLALAISICEESREEGGKIG 113
BLAST of mRNA_M-pyrifera_M_contig11401.2911.1 vs. uniprot
Match: A0A101VV54_9FIRM (Peptidylprolyl isomerase n=1 Tax=Gracilibacter sp. BRH_c7a TaxID=1734398 RepID=A0A101VV54_9FIRM) HSP 1 Score: 54.7 bits (130), Expect = 3.610e-6 Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 184 KVVKPWLTKAQETVD---------YSNVEAMYVRHILVQTEAIAKMCLNQLRDGADFAELASSISDCQATRTKGGEVG 390
K++ P +T AQE ++ ++ EA+ RHILV+TE +AK N+L DG DF++LA S + + +GG++G
Sbjct: 127 KLIGPGITIAQEEIEEYFEMYKDSFAVAEAVKARHILVETEEVAKEVKNKLADGEDFSKLAKQYSIDDSNKEQGGDLG 204
BLAST of mRNA_M-pyrifera_M_contig11401.2911.1 vs. uniprot
Match: D1C3R6_SPHTD (PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) TaxID=479434 RepID=D1C3R6_SPHTD) HSP 1 Score: 50.8 bits (120), Expect = 9.700e-5 Identity = 35/81 (43.21%), Postives = 42/81 (51.85%), Query Frame = 1
Query: 169 EGVRRKVVKPWLTKAQETVDYS-------NVEAMYVRHILVQTEAIAKMCLNQLRDGADFAELASSISDCQATRTKGGEVG 390
E RR VV P A++ V Y+ E ++ HILV TE AK QLR GADFAELA S AT GG++G
Sbjct: 267 EDFRRLVVLP--EAARQKVVYALQEKIPTRAEQVHAAHILVATEDAAKAIEEQLRQGADFAELAKEQSADSATAVNGGDLG 345 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11401.2911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11401.2911.1 >prot_M-pyrifera_M_contig11401.2911.1 ID=prot_M-pyrifera_M_contig11401.2911.1|Name=mRNA_M-pyrifera_M_contig11401.2911.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp SCSGFAWPLSPSVANVGQGIRSGDGRQSTVAAMTTPRGRLLAATTDGGGAback to top mRNA from alignment at M-pyrifera_M_contig11401:178..4126- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11401.2911.1 ID=mRNA_M-pyrifera_M_contig11401.2911.1|Name=mRNA_M-pyrifera_M_contig11401.2911.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3949bp|location=Sequence derived from alignment at M-pyrifera_M_contig11401:178..4126- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11401:178..4126- >mRNA_M-pyrifera_M_contig11401.2911.1 ID=mRNA_M-pyrifera_M_contig11401.2911.1|Name=mRNA_M-pyrifera_M_contig11401.2911.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig11401:178..4126- (Macrocystis pyrifera P11B4 male)back to top |