prot_M-pyrifera_M_contig114008.2910.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114008.2910.1
Unique Nameprot_M-pyrifera_M_contig114008.2910.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length134
Homology
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: A0A2C9JDB7_BIOGL (DNA repair protein RAD51 homolog n=7 Tax=Gastropoda TaxID=6448 RepID=A0A2C9JDB7_BIOGL)

HSP 1 Score: 202 bits (513), Expect = 6.040e-62
Identity = 93/134 (69.40%), Postives = 118/134 (88.06%), Query Frame = 0
Query:    1 MPVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            MP+A+LE NGISAGD+KKL E GF+TVE+VA+A KKML+S++G+SE K +KI+A A+KL+PMGF TAT+ H++R ++I L+TGS ELDK+L GG+ETGSITE++GEFRTGKTQLCHTL VTCQLP+D GG EGK
Sbjct:   27 MPLAKLEGNGISAGDIKKLEEAGFHTVESVAFAPKKMLLSIKGISEVKADKIVAEAAKLVPMGFTTATEFHQKRSEIIQLTTGSKELDKLLQGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPIDMGGGEGK 160          
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: A0A2P6NMM4_9EUKA (DNA repair protein RAD51 homolog n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NMM4_9EUKA)

HSP 1 Score: 201 bits (510), Expect = 2.130e-61
Identity = 93/134 (69.40%), Postives = 116/134 (86.57%), Query Frame = 0
Query:    1 MPVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            +PV++LE NGI+A D+KKL+EGGF TV AVA ATK+ L++++G+SE K +K+LA A KL+PMGF +A +VHR+RQD+IYL TGS ELDKIL GG+ETGSITEL+GEFRTGKTQ+CH LCVTCQLPL QGG EG+
Sbjct:   34 LPVSKLEGNGITAADIKKLTEGGFFTVTAVATATKRALIAIKGISEQKADKLLAEAGKLVPMGFHSAAEVHRERQDIIYLGTGSKELDKILDGGIETGSITELFGEFRTGKTQICHQLCVTCQLPLTQGGGEGR 167          
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: A0A7S4ML14_9EUKA (DNA repair protein RAD51 homolog n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ML14_9EUKA)

HSP 1 Score: 199 bits (505), Expect = 8.000e-61
Identity = 94/134 (70.15%), Postives = 117/134 (87.31%), Query Frame = 0
Query:    1 MPVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            +PV +LE +GI+A D KKL E GF+TVE+VAY+T K L SV+G++EAK EK+L AASKL+PMGFQTAT+ H+ R ++I+L+TGSTELDKIL GG+ETGSITE++GEFRTGK+QL H LCVTCQLP+DQGGAEGK
Sbjct:   20 LPVQRLEAHGITATDTKKLMEAGFHTVESVAYSTLKSLTSVKGITEAKAEKLLTAASKLVPMGFQTATECHQARSEIIHLTTGSTELDKILMGGIETGSITEIFGEFRTGKSQLAHMLCVTCQLPVDQGGAEGK 153          
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: A0A3P9MWD1_POERE (RAD51 recombinase n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3P9MWD1_POERE)

HSP 1 Score: 195 bits (495), Expect = 8.280e-61
Identity = 89/133 (66.92%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    2 PVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            P+++LE  GISA D+KKL + GF+T+EAVAYA KK L++++G+SEAK +K+LA A+KL+PMGF TAT+ H++R ++I +STGS ELDK+L GG+ETGSITE++GEFRTGKTQLCHTL VTCQLP+DQGG EGK
Sbjct:   23 PLSRLEHCGISASDIKKLEDAGFHTIEAVAYAPKKELLNIKGISEAKADKVLAEAAKLVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGK 155          
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: A0A2K6M7Q9_RHIBE (RECA_2 domain-containing protein n=10 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2K6M7Q9_RHIBE)

HSP 1 Score: 195 bits (495), Expect = 8.810e-61
Identity = 89/133 (66.92%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    2 PVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            P+++LE  GI+A DVKKL E GF+TVEAVAYA KK L++++G+SEAK +KILA A+KL+PMGF TAT+ H++R ++I ++TGS ELDK+L GG+ETGSITE++GEFRTGKTQ+CHTL VTCQLP+D+GG EGK
Sbjct:   24 PISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156          
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: UPI0007ACCEC4 (DNA repair protein RAD51 homolog A-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=UPI0007ACCEC4)

HSP 1 Score: 194 bits (494), Expect = 9.430e-61
Identity = 89/133 (66.92%), Postives = 115/133 (86.47%), Query Frame = 0
Query:    2 PVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            P+++LE  GIS+ D+KKL +GGF+TVEAVAYA KK L+ ++G+SEAK +KIL  A+K++PMGF TAT+ H++R ++I +STGS ELDK+L GG+ETGSITE++GEFRTGKTQLCHTL VTCQLP+DQGG EGK
Sbjct:   25 PISRLEQCGISSSDIKKLEDGGFHTVEAVAYAPKKELLHIKGVSEAKADKILTEAAKMVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGK 157          
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: A0A7L4N058_9AVES (RAD51 protein (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L4N058_9AVES)

HSP 1 Score: 193 bits (490), Expect = 1.260e-60
Identity = 90/132 (68.18%), Postives = 115/132 (87.12%), Query Frame = 0
Query:    3 VAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            +++LE  GI+A DVKKL E GF+TVEAVAYA KK L++++G+SEAK +KILA A+KL+PMGF TAT+ H++R ++I ++TGS ELDK+L GG+ETGSITEL+GEFRTGKTQLCHTL VTCQLP+D+GG EGK
Sbjct:   25 ISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELLNIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGK 156          
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: A0A482VJ29_9CUCU (DNA repair protein RAD51 homolog n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VJ29_9CUCU)

HSP 1 Score: 198 bits (503), Expect = 1.690e-60
Identity = 92/133 (69.17%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    2 PVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            PV++LE NG++AGD+KKL E GF+TVE+VA+  KK L S++GLSEAKVEKILA A+KL+PMGF TATD H++R ++I L+TGS ELDK+L GG+ETGSITE++GEFRTGKTQ+CHTL VTCQLP++ GG EGK
Sbjct:   23 PVSKLEGNGVTAGDIKKLEEAGFHTVESVAFTPKKCLASLKGLSEAKVEKILAEAAKLVPMGFTTATDFHQKRSEIIQLTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQICHTLAVTCQLPIESGGGEGK 155          
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: Q1WBR2_PHYPO (Rad51 (Fragment) n=1 Tax=Physarum polycephalum TaxID=5791 RepID=Q1WBR2_PHYPO)

HSP 1 Score: 193 bits (491), Expect = 1.730e-60
Identity = 89/134 (66.42%), Postives = 117/134 (87.31%), Query Frame = 0
Query:    1 MPVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            +P+A+LE +GISA D+KKL E GF+TVE+VAYATKK L +V+G+SEAK +K++ +A+KL+PMGF TAT++H  R+++I ++TGSTEL+K+L GG+ETGSITE++GEFRTGKTQLCHTLCVTCQLPL   G EGK
Sbjct:   15 IPIAKLEGSGISAADIKKLMESGFHTVESVAYATKKSLSAVKGISEAKADKLVESAAKLVPMGFITATEMHENRKEIIQITTGSTELNKLLDGGIETGSITEIFGEFRTGKTQLCHTLCVTCQLPLADNGGEGK 148          
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Match: A0A8D1AIL7_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1AIL7_PIG)

HSP 1 Score: 193 bits (491), Expect = 3.150e-60
Identity = 88/133 (66.17%), Postives = 115/133 (86.47%), Query Frame = 0
Query:    2 PVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVEKILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSITELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK 134
            P+++LE  GI+A DVKKL E GF+TVEAVAYA KK L++++G+SEAK +KIL  A+KL+PMGF TAT+ H++R ++I ++TGS ELDK+L GG+ETGSITE++GEFRTGKTQ+CHTL VTCQLP+D+GG EGK
Sbjct:   24 PISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114008.2910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2C9JDB7_BIOGL6.040e-6269.40DNA repair protein RAD51 homolog n=7 Tax=Gastropod... [more]
A0A2P6NMM4_9EUKA2.130e-6169.40DNA repair protein RAD51 homolog n=1 Tax=Planoprot... [more]
A0A7S4ML14_9EUKA8.000e-6170.15DNA repair protein RAD51 homolog n=1 Tax=Vannella ... [more]
A0A3P9MWD1_POERE8.280e-6166.92RAD51 recombinase n=3 Tax=Percomorphaceae TaxID=14... [more]
A0A2K6M7Q9_RHIBE8.810e-6166.92RECA_2 domain-containing protein n=10 Tax=Boreoeut... [more]
UPI0007ACCEC49.430e-6166.92DNA repair protein RAD51 homolog A-like n=1 Tax=Si... [more]
A0A7L4N058_9AVES1.260e-6068.18RAD51 protein (Fragment) n=3 Tax=Neognathae TaxID=... [more]
A0A482VJ29_9CUCU1.690e-6069.17DNA repair protein RAD51 homolog n=1 Tax=Asbolus v... [more]
Q1WBR2_PHYPO1.730e-6066.42Rad51 (Fragment) n=1 Tax=Physarum polycephalum Tax... [more]
A0A8D1AIL7_PIG3.150e-6066.17Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14520HHH_5coord: 6..57
e-value: 2.0E-7
score: 31.5
NoneNo IPR availableGENE3D1.10.150.20coord: 1..67
e-value: 1.6E-27
score: 97.3
NoneNo IPR availableGENE3D3.40.50.300coord: 68..134
e-value: 2.3E-23
score: 85.0
NoneNo IPR availablePANTHERPTHR22942:SF39DNA REPAIR PROTEIN RAD51 HOMOLOG 1coord: 2..134
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 2..134
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 62..134
e-value: 5.7E-33
score: 114.2
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 76..134
score: 23.085
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 41..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114008contigM-pyrifera_M_contig114008:3..404 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114008.2910.1mRNA_M-pyrifera_M_contig114008.2910.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114008 3..428 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114008.2910.1 ID=prot_M-pyrifera_M_contig114008.2910.1|Name=mRNA_M-pyrifera_M_contig114008.2910.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
MPVAQLELNGISAGDVKKLSEGGFNTVEAVAYATKKMLVSVRGLSEAKVE
KILAAASKLIPMGFQTATDVHRQRQDVIYLSTGSTELDKILHGGMETGSI
TELYGEFRTGKTQLCHTLCVTCQLPLDQGGAEGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase