prot_M-pyrifera_M_contig1140.2905.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1140.2905.1
Unique Nameprot_M-pyrifera_M_contig1140.2905.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length562
Homology
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BLAST of mRNA_M-pyrifera_M_contig1140.2905.1 vs. uniprot
Match: A0A6H5JTB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB3_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 2.960e-32
Identity = 186/389 (47.81%), Postives = 211/389 (54.24%), Query Frame = 0 
Query:    8 EIGALHFLVELRLRENKLVGKIPPLLSNMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--LPRRLFTGLSSSLVYLDLSRNAFEGETHLAALSPYS---RELALTESGSDDVLISDEDDSGATS----SWAAQTAAFSSPLSYLNLSRNQFTGPIPGAIGGLTSLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGLSGHLDGADGGGGAPGNSGGGLGRLALLESLRLDGNLFEGGVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRSLRLEGNPSLKGPIPEPLASRSECAVTADDSVLEDTEATKLGARLGDWFLMTRKA 387
            E+ +LHFLVELRLREN+L GKI P+L NM+ XXXXXXXXX                           XXXXXXXXXXXXXXXXXXXX        +   + + LSSSLVYL+L  NAFEG+  ++ LS +S   R    + SGS        D  G  S    S +A     +SPLSYLNL  N+FTG +P  IG LTSL  XXXXXXXXXXXXXXXXXXXXXXXXXXXX        +G DGGG         LGRL+ LE LRLDGN F G VPAA                                                     GLRSLRLE NPSL+GPIP+ LAS   C V AD  VLEDTEA  LG++L +WFLM RKA
Sbjct:  287 ELASLHFLVELRLRENRLAGKISPMLVNMQSXXXXXXXXXALQGHIPESLGEMTNLRELWLGRRENQXXXXXXXXXXXXXXXXXXXXSRNKALWKIHPHILSTLSSSLVYLNLGHNAFEGDLPVSPLSSHSAGGRVRRGSRSGSQ------SDGQGRNSRRKRSESAAAVVSASPLSYLNLCHNKFTGHVPEEIGSLTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDDGGG---------LGRLSSLEILRLDGNTFHGIVPAALGNLARLEVLHLQLDRLWALAVRDNNLSGRVPESLGCLT--------------GLRSLRLEENPSLRGPIPDQLASGVNCNVRADQPVLEDTEAAMLGSKLDEWFLMPRKA 646
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BLAST of mRNA_M-pyrifera_M_contig1140.2905.1 vs. uniprot
Match: D7FPI3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI3_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.460e-27
Identity = 186/290 (64.14%), Postives = 208/290 (71.72%), Query Frame = 0 
Query:  105 LFTGLSSSLVYLDLSRNAFEGETHLAALSPYS---RELALTESGSDDVLISDEDDSGATS----SWAAQTAAFSSPLSYLNLSRNQFTGPIPGAIGGLTSLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGLSGHLDGADGGGGAPGNSGGGLGRLALLESLRLDGNLFEGGVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRSLRLEGNPSLKGPIPEPLASRSECAVTADDSVLEDTEATKLGARLGDWFLMTRKA 387
            + + LSSSLVYL+L  NAFEG+  ++ LSP+S   R    + SGS        +  G +S    S +A     +SPLSYLNL  N+FTG +   IG LTS   XXXXXXXXXXXXXXXXXXXXXXXXXXXX    SG L+G DGGG         LGRL+ LE+LRLDGN F G VPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     RLE NPSL+GPIP+ LAS   C V AD  VL+DTEAT LG+RL +WFLM RKA
Sbjct:  247 VLSALSSSLVYLNLGHNAFEGDLPVSPLSPHSAGGRVRRGSTSGSP------SEGQGRSSRRRRSESAAGVVSASPLSYLNLCHNKFTGRVSEEIGSLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGILEGDDGGG---------LGRLSSLETLRLDGNTFHGIVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEENPSLRGPIPDQLASGVNCNVRADQPVLDDTEATMLGSRLDEWFLMPRKA 521
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1140.2905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTB3_9PHAE2.960e-3247.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI3_ECTSI1.460e-2764.14Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 195..208
score: 57.25
coord: 87..100
score: 51.88
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 174..235
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 5..127
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 174..235
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 5..127
coord: 254..353
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 254..353
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 252..352
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..234
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 195..218
e-value: 57.0
score: 7.1
coord: 256..279
e-value: 240.0
score: 1.9
coord: 84..108
e-value: 0.015
score: 24.5
coord: 36..60
e-value: 18.0
score: 11.3
coord: 280..304
e-value: 56.0
score: 7.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..243
e-value: 1.6E-59
score: 203.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 244..370
e-value: 2.2E-24
score: 87.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 15..73
e-value: 1.6E-7
score: 31.0
coord: 174..230
e-value: 5.4E-8
score: 32.5
coord: 259..317
e-value: 2.2E-6
score: 27.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1140contigM-pyrifera_M_contig1140:613..8843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1140.2905.1mRNA_M-pyrifera_M_contig1140.2905.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1140 613..8843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1140.2905.1 ID=prot_M-pyrifera_M_contig1140.2905.1|Name=mRNA_M-pyrifera_M_contig1140.2905.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=562bp
LNGAIPREIGALHFLVELRLRENKLVGKIPPLLSNMRSLQVLDLTFNALQ
GHIPESLGGMTELRELWLGGNQLVGGIPEALSRLTDLESLDLSRNKLGAT
LPRRLFTGLSSSLVYLDLSRNAFEGETHLAALSPYSRELALTESGSDDVL
ISDEDDSGATSSWAAQTAAFSSPLSYLNLSRNQFTGPIPGAIGGLTSLDT
LDLSHNKLEGPVPWDLGGCRRLRVVSLSRCGLSGHLDGADGGGGAPGNSG
GGLGRLALLESLRLDGNLFEGGVPAALGNLTRLEVLQLQGNCFSGCLPHT
LGQLGRLWTLGVRDNELSGRVPESLGRLTGLRSLRLEGNPSLKGPIPEPL
ASRSECAVTADDSVLEDTEATKLGARLGDWFLMTRKAFLKLRDFPGFPSA
RPSLVRYASTVVPYECHVFSAARGRRVFVRQKEIAFFSHCWDLPPEQCPP
RRSVLEGPHMDAANINKLRHMQACLKEAPPNIQYVWLDMLCVPLAEPKSR
RAAGRTVPFFVQNSGRVYIFVDDSSGLQRYQRRAWCRLEALCAACPHQPS
QVESAFSPKVSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt