prot_M-pyrifera_M_contig113998.2903.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113998.2903.1
Unique Nameprot_M-pyrifera_M_contig113998.2903.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length85
Homology
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: A0A812W4J6_SYMMI (RABH1E protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W4J6_SYMMI)

HSP 1 Score: 127 bits (320), Expect = 1.580e-36
Identity = 61/80 (76.25%), Postives = 75/80 (93.75%), Query Frame = 0
Query:    6 RASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV 85
            RASFLN SKWI+DVRN+RGSD+II LVGNKTD S+RRQV+VEEGE K+ +EG++F+ETSAKAG+N+KALFRKLA+ALPG+
Sbjct:    1 RASFLNTSKWIEDVRNERGSDVIIVLVGNKTDASERRQVSVEEGEDKSTKEGIMFIETSAKAGFNIKALFRKLATALPGM 80          
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: A0A662WQ97_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQ97_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.680e-35
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 0
Query:    3 RADRASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV 85
            R DRASFLN SKWI+DVR +RG D++I LVGNKTD+SDRRQV++EEG  KAKEE V+F+ETSAKAGYN+KALFRKLA+ LPG+
Sbjct:  141 RTDRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGM 223          
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: A0A7S2UZT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZT5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.160e-35
Identity = 61/81 (75.31%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    5 DRASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV 85
            +RASFLN SKW++DVRN+RG+D++I LVGNKTDLSDRRQV+VEEGE +AK E ++F+ETSAKAGYNVKALF KLA+ALPG+
Sbjct:  110 NRASFLNTSKWVEDVRNERGNDVVIMLVGNKTDLSDRRQVSVEEGEERAKSEQIMFIETSAKAGYNVKALFNKLATALPGM 190          
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: A0A4D9D1C8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1C8_9STRA)

HSP 1 Score: 128 bits (321), Expect = 2.900e-35
Identity = 60/81 (74.07%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    5 DRASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV 85
            +RASFLN SKW+DDVRN+RG+D+II LVGNKTDLSDRRQV+ EEGE KAK++ ++F+ETSAKAG+N+K LFRKLA+ALPG+
Sbjct:  108 NRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGM 188          
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: A0A0G4EBT9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EBT9_VITBC)

HSP 1 Score: 127 bits (320), Expect = 2.990e-35
Identity = 62/81 (76.54%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    5 DRASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV 85
            +RASFLN +KWI+DVR +RGSD+II LVGNKTDL+DRRQV+VEEGE KAKE  ++F+ETSAKAG+N+KALFRKLASALPG+
Sbjct:   99 NRASFLNTTKWIEDVRAERGSDVIIALVGNKTDLADRRQVSVEEGEQKAKENEIMFIETSAKAGFNIKALFRKLASALPGL 179          
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: A0A7S3WKL6_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WKL6_9SPIT)

HSP 1 Score: 127 bits (320), Expect = 3.070e-35
Identity = 61/80 (76.25%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    5 DRASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPG 84
            +RASFLN SKWI+DVR++RGSD++I LVGNKTDL+DRRQV+ EEGE KAKE GV+F+ETSAK GYN+KALFR+LA ALPG
Sbjct:  100 NRASFLNTSKWIEDVRSERGSDVVIVLVGNKTDLADRRQVSTEEGEEKAKENGVMFIETSAKMGYNIKALFRQLAQALPG 179          
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: U6L374_EIMTE (RAB6 protein, putative (Fragment) n=1 Tax=Eimeria tenella TaxID=5802 RepID=U6L374_EIMTE)

HSP 1 Score: 124 bits (310), Expect = 6.100e-35
Identity = 58/80 (72.50%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    6 RASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV 85
            RASF+N +KWI+DVR +RG D++I LVGNKTDLSDRRQV+ EEGE KA+E+G++F+ETSAKAG+NVK LFRKLA+ALPG+
Sbjct:    1 RASFINTTKWIEDVRAERGKDVVIALVGNKTDLSDRRQVSPEEGEQKAREQGILFIETSAKAGHNVKTLFRKLAAALPGL 80          
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: D7FMQ4_ECTSI (Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ4_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 7.020e-35
Identity = 59/81 (72.84%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    5 DRASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV 85
            +RASFLN SKWI+DVRN+RG+D+++ LVGNKTDL +RRQV+VEEGE +AK EG++F+ETSAK GYN+KALFRKLA+ALPG+
Sbjct:  105 NRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGM 185          
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: U6MPP8_9EIME (RAB6 protein, putative (Fragment) n=1 Tax=Eimeria necatrix TaxID=51315 RepID=U6MPP8_9EIME)

HSP 1 Score: 124 bits (311), Expect = 9.300e-35
Identity = 58/81 (71.60%), Postives = 74/81 (91.36%), Query Frame = 0
Query:    5 DRASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV 85
            +RASF+N +KWI+DVR +RG D++I LVGNKTDLSDRRQV+ EEGE KA+E+G++F+ETSAKAG+NVK LFRKLA+ALPG+
Sbjct:   11 NRASFINTTKWIEDVRAERGKDVVIALVGNKTDLSDRRQVSPEEGEQKAREQGILFIETSAKAGHNVKTLFRKLAAALPGL 91          
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Match: UPI001E1E0672 (ras-related protein RABH1d-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0672)

HSP 1 Score: 126 bits (317), Expect = 1.080e-34
Identity = 59/81 (72.84%), Postives = 76/81 (93.83%), Query Frame = 0
Query:    5 DRASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGEAKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV 85
            +R SFL+ SKWIDDVRN+RG+D+I+ LVGNKTD +++RQV+VEEGEAKAKE G++F+ETSAKAG+NVKALFRK+A+ALPG+
Sbjct:  101 NRTSFLSTSKWIDDVRNERGNDVILVLVGNKTDQAEKRQVSVEEGEAKAKEHGIMFIETSAKAGFNVKALFRKIAAALPGM 181          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113998.2903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812W4J6_SYMMI1.580e-3676.25RABH1E protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A662WQ97_9STRA1.680e-3574.70Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A7S2UZT5_9STRA2.160e-3575.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D1C8_9STRA2.900e-3574.07Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A0G4EBT9_VITBC2.990e-3576.54Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S3WKL6_9SPIT3.070e-3576.25Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
U6L374_EIMTE6.100e-3572.50RAB6 protein, putative (Fragment) n=1 Tax=Eimeria ... [more]
D7FMQ4_ECTSI7.020e-3572.84Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
U6MPP8_9EIME9.300e-3571.60RAB6 protein, putative (Fragment) n=1 Tax=Eimeria ... [more]
UPI001E1E06721.080e-3472.84ras-related protein RABH1d-like n=1 Tax=Mercenaria... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 25..38
score: 50.15
coord: 60..82
score: 39.06
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 4..85
e-value: 4.0E-9
score: 4.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 4..85
e-value: 0.0059
score: -61.9
NoneNo IPR availableGENE3D3.40.50.300coord: 3..83
e-value: 4.5E-24
score: 86.9
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 4..81
NoneNo IPR availablePANTHERPTHR24073:SF952coord: 4..81
NoneNo IPR availablePROSITEPS51419RABcoord: 1..85
score: 12.477
IPR001806Small GTPasePFAMPF00071Rascoord: 5..81
e-value: 3.4E-21
score: 75.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113998contigM-pyrifera_M_contig113998:34..288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113998.2903.1mRNA_M-pyrifera_M_contig113998.2903.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113998 34..288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113998.2903.1 ID=prot_M-pyrifera_M_contig113998.2903.1|Name=mRNA_M-pyrifera_M_contig113998.2903.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp
RRRADRASFLNVSKWIDDVRNQRGSDIIITLVGNKTDLSDRRQVTVEEGE
AKAKEEGVIFVETSAKAGYNVKALFRKLASALPGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase