prot_M-pyrifera_M_contig113981.2897.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113981.2897.1
Unique Nameprot_M-pyrifera_M_contig113981.2897.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length179
Homology
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: A0A852Z3H0_9ACTN (Oxygen sensor histidine kinase NreB n=2 Tax=Actinopolyspora TaxID=1849 RepID=A0A852Z3H0_9ACTN)

HSP 1 Score: 121 bits (303), Expect = 1.700e-29
Identity = 78/177 (44.07%), Postives = 110/177 (62.15%), Query Frame = 0
Query:    6 LIAAIVLLVFYVARVVLRHR---RWSELVWLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARSPDT 179
            L  A+VL V Y A  +  HR   RW  L+WL  +TV W A ++  + DF WV+ PL FL+L +L  + AVV VA +  +VI+ + F  DG S A V+GP LGA FA+V   GY  +  E +  +  +ADL  TR  LA SQHE G+  ER+R+ARE+HDTIAQ L+ ++ + R+ ++
Sbjct:   48 LCGAVVLAVLYAAGALPPHRTYPRWVALLWLAGVTVLW-ALLLAASPDFSWVAFPLFFLHLHLLRWTHAVVAVAVVTGLVISTQLFHADGFSVAMVLGPTLGAVFAVVVAWGYAAIHAESQQRRDLIADLRETRAQLATSQHEAGVAAERERLAREIHDTIAQGLSSVVLLLRAAES 223          
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: UPI001EDA2158 (sensor histidine kinase n=1 Tax=Arthrobacter sp. I2-34 TaxID=2904801 RepID=UPI001EDA2158)

HSP 1 Score: 117 bits (292), Expect = 1.040e-27
Identity = 82/193 (42.49%), Postives = 119/193 (61.66%), Query Frame = 0
Query:    1 ADRQTLIA---AIVLLVFYVARVVLRHRR--------------WSELVWLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARS 176
            ADR T +A   A++L   Y+A  V   RR              W    WL A+TV W+A  + ++  F W++ PL FL+L +L    AV  VAA+  VVIA++ +    L  A +IGP++GA FA++ G+ YR L ++ E+ +RALA+L  TR +LA+SQHE GML ER R+ARE+HDT+AQ L+ I+ ++RS
Sbjct:   44 ADRATYLALGLALLLAAVYLAGTVAEKRRSTGGRGPDLRRYAPW----WLAAVTVLWVALAV-LSASFAWLAFPLFFLHLHVLRTGHAVFAVAALTGVVIASQWWHAGRLEPAMLIGPVVGAVFAVLMGMAYRALYLDAENQRRALAELRRTRAELAQSQHEAGMLAERSRLAREIHDTLAQGLSSIVLVSRS 231          
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: A0A2U3BZP8_9ACTN (Oxygen sensor histidine kinase NreB n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A2U3BZP8_9ACTN)

HSP 1 Score: 116 bits (290), Expect = 1.050e-27
Identity = 79/180 (43.89%), Postives = 112/180 (62.22%), Query Frame = 0
Query:    1 ADRQTLIAAIVLLVFYVARVV-LRHRRWSELVWLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARSPDT 179
            ADR  L+  ++L   Y A  + LR  R    VWL ALT+ W AA +    DF +++ PL FLYL ++P+  ++  VAA+ A V+  +A    GL+AA+VIGP+ GA  A++   GY  L  E    QR + DL  TRD+LA +Q E G L ERQR+ARE+HDT+AQ L+ I+ +AR+ D+
Sbjct:   35 ADRWVLVLGLLLAAVYPAGALGLRRGRGGTAVWLAALTLLW-AAALAGDPDFGYLAFPLFFLYLHLVPVRWSLPCVAAVTAAVVVTQAAGPGGLTAAKVIGPLAGAAVAVLTAYGYAALYRESRARQRLIDDLVTTRDELAAAQREAGRLAERQRLAREIHDTLAQGLSSIVLLARAADS 213          
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: A0A852TTV1_9ACTN (Oxygen sensor histidine kinase NreB n=2 Tax=Spinactinospora alkalitolerans TaxID=687207 RepID=A0A852TTV1_9ACTN)

HSP 1 Score: 115 bits (289), Expect = 1.920e-27
Identity = 80/181 (44.20%), Postives = 112/181 (61.88%), Query Frame = 0
Query:    2 DRQTLIAAIVLLVFYVARVVL-RH--RRWSELVWLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARSPDT 179
            DR  L  A++L + Y A   + RH  RR   LVWL A+T  W AA++ V  DF W++ PL F++L +L  + AV  V  I   VIA +A     LS A ++GP+LGA FA+V  +GY  L  E E  +  + DL  TR +LA SQH+ G+L ER+R+ARE+HDT+AQ L+ I+ + RS +T
Sbjct:   49 DRVALGGAVLLALVYCAGAFVGRHGTRRAPALVWLAAVTAIW-AALLLVGPDFAWLAFPLFFIHLHLLRRAHAVAAVLVITGAVIATQALHAGRLSMAMMLGPLLGAAFAVVIALGYAALYRESEQRRVLIDDLTRTRGELAASQHQAGVLAERERLAREIHDTLAQGLSSIVLLLRSAET 228          
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: A0A846RKK6_9MICC (Oxygen sensor histidine kinase NreB n=1 Tax=Arthrobacter pigmenti TaxID=271432 RepID=A0A846RKK6_9MICC)

HSP 1 Score: 115 bits (289), Expect = 2.740e-27
Identity = 70/147 (47.62%), Postives = 98/147 (66.67%), Query Frame = 0
Query:   32 WLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARSPD 178
            WL  +T  W A V+ +  DF W++ PL FL+L +L    A+  VAAI  VV+AA+ +    L  A V+GP+LGAGFA++ G+ Y+ L  E  + +RAL DL  TR +LA SQHE G L ER+R+ARE+HDT+AQ L+ I+ I+R+ D
Sbjct:   92 WLAVITGLW-AFVLVIHPDFSWLAFPLFFLHLHLLKTGHAIAAVAAITVVVMAAQWYHNGELHIAMVLGPVLGAGFAVIMGLAYQALHAESVNQRRALEDLHRTRTELAHSQHEAGALAERERLAREIHDTLAQGLSSIVLISRAAD 237          
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: A0A5Q3Q5P0_9PSEU (Oxygen sensor histidine kinase NreB n=2 Tax=Allosaccharopolyspora coralli TaxID=2665642 RepID=A0A5Q3Q5P0_9PSEU)

HSP 1 Score: 114 bits (284), Expect = 2.240e-26
Identity = 75/172 (43.60%), Postives = 104/172 (60.47%), Query Frame = 0
Query:    6 LIAAIVLLVFYVARVVL-RHRRWSELVWLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARS 176
            L  A+VL   Y A ++  R  RW +LVWL A+T  W A ++  + DF WV+ PL FL+L +L    AV  V AI  +V+ A+     G S   V+GP LGA FAIV   GY  +A E E  +  + DL  TR++LA SQH  G+L ER+R+ARE+HDT+AQ  + ++ + RS
Sbjct:  137 LCGAVVLAALYAAGLMWSRRHRWLDLVWLAAITTEW-ALLLAASPDFSWVAFPLFFLHLALLARWHAVAAVVAITGLVVLAQIAHAQGWSVGMVLGPALGAVFAIVMAWGYAAIAAESEQRRLLIDDLTRTREELATSQHRAGVLAERERLAREIHDTLAQGFSSVVLLLRS 307          
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: A0A543NNK5_9ACTN (Oxygen sensor histidine kinase NreB n=1 Tax=Haloactinospora alba TaxID=405555 RepID=A0A543NNK5_9ACTN)

HSP 1 Score: 112 bits (280), Expect = 3.910e-26
Identity = 69/161 (42.86%), Postives = 99/161 (61.49%), Query Frame = 0
Query:   22 LRHRRWSE----LVWLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARSPD 178
            L   RW      LVWL A+T  W A ++ ++ DF WV+ PL FL+L +L    A++ V  +   V+AA+A      + A ++GP LGA FA+V  +GY  L  E E  +R + DL  TR++LA SQH  GML ER+R++RE+HDT+AQ L+ I+ + RS D
Sbjct:   73 LTQPRWPTRRMALVWLAAVTAVW-AVLLLLSPDFSWVAFPLFFLHLHLLDRGHAILAVTVVTGAVVAAQAAHAQSFTVAMLLGPALGAVFAVVIALGYAALYTESEQRRRLIEDLRRTRNELAESQHTAGMLAERERLSREIHDTLAQGLSSIVLLLRSAD 232          
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: A0A1H2XAL7_9PSEU (Oxygen sensor histidine kinase NreB n=4 Tax=Saccharopolyspora TaxID=1835 RepID=A0A1H2XAL7_9PSEU)

HSP 1 Score: 112 bits (279), Expect = 5.250e-26
Identity = 69/174 (39.66%), Postives = 107/174 (61.49%), Query Frame = 0
Query:    9 AIVLLVFYVARVVLRH---RRWSELVWLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARSPDT 179
            A++L   Y A   +RH   RRW  + WL A+T  W A ++ ++ DF W++ PL FL+L +L    A+V V  + A+V++A+ +     S   V+GP++GAG A+V   GY  +  E +  Q  + DL  TR +LA SQH+ G+  ER+R+ARE+HDT+AQ L+ I+ + R+ DT
Sbjct:   58 AVLLTAVYAAGAAVRHALHRRWLAMAWLAAVTAVW-AGLLVISPDFSWLAFPLFFLHLHLLRGRHALVAVVVVTALVVSAQGWHAGTWSVGMVLGPVVGAGVAVVITWGYSAIYAESQRRQALIDDLTRTRAELASSQHQAGVAAERERLAREIHDTLAQGLSSIVLLLRAADT 230          
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: A0A2P8C8B7_9ACTN (Oxygen sensor histidine kinase NreB n=3 Tax=Nocardiopsaceae TaxID=83676 RepID=A0A2P8C8B7_9ACTN)

HSP 1 Score: 111 bits (278), Expect = 7.730e-26
Identity = 78/182 (42.86%), Postives = 111/182 (60.99%), Query Frame = 0
Query:    1 ADRQTLIA-AIVLLVFYVARVVLRHR---RWSELVWLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARSPD 178
            ADR   ++ A+VL V Y +  ++RHR   R   L WL A+T  W A ++    DF WV+ PL FL+L +L    AVV V  I A V+AA+A     L+   V+GP++GA  +++  +GY  L  E E  +R + DL  TR DLA SQH  G+L ER+R+ARE+HDT+AQ L+ I+ + RS +
Sbjct:   43 ADRWAAVSGALVLAVVYASGPLMRHRAPARAPALGWLAAVTALW-AGLLLSAPDFSWVAFPLFFLHLHLLRRGHAVVAVTVITAAVVAAQALHLGTLTVPVVLGPVIGALTSVIIALGYAALYNESEQRRRLIDDLTRTRGDLAASQHRAGVLAERERLAREIHDTLAQGLSSIVLLLRSAE 223          
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Match: A0A7K2NHV1_9ACTN (Sensor histidine kinase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A7K2NHV1_9ACTN)

HSP 1 Score: 111 bits (277), Expect = 7.910e-26
Identity = 70/156 (44.87%), Postives = 100/156 (64.10%), Query Frame = 0
Query:   23 RHRRWSELVWLWALTVAWLAAVMFVTVDFVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIGPILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLDERQRMAREVHDTIAQDLAGILFIARSPD 178
            R R W+   WL  +T  W AA++ +  DF +++ PL FLYL +LP   ++  VAA  AVV+  ++    GL+AA+VIGP+ GAG A++   GY  L  E    QR + DL  TRD+LA +QHE G L ERQR+ARE+HDT+AQ L+ I+ + R+ +
Sbjct:   62 RGRAWA---WLAVVTALW-AALLALDADFGYLAFPLFFLYLHLLPARWSLPCVAAATAVVVVTQSAGPGGLTAAKVIGPLAGAGVAVLTAYGYAALYRESRERQRLIDDLMTTRDELAAAQHEAGRLAERQRLAREIHDTLAQGLSSIVLLTRAAE 213          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113981.2897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A852Z3H0_9ACTN1.700e-2944.07Oxygen sensor histidine kinase NreB n=2 Tax=Actino... [more]
UPI001EDA21581.040e-2742.49sensor histidine kinase n=1 Tax=Arthrobacter sp. I... [more]
A0A2U3BZP8_9ACTN1.050e-2743.89Oxygen sensor histidine kinase NreB n=2 Tax=unclas... [more]
A0A852TTV1_9ACTN1.920e-2744.20Oxygen sensor histidine kinase NreB n=2 Tax=Spinac... [more]
A0A846RKK6_9MICC2.740e-2747.62Oxygen sensor histidine kinase NreB n=1 Tax=Arthro... [more]
A0A5Q3Q5P0_9PSEU2.240e-2643.60Oxygen sensor histidine kinase NreB n=2 Tax=Allosa... [more]
A0A543NNK5_9ACTN3.910e-2642.86Oxygen sensor histidine kinase NreB n=1 Tax=Haloac... [more]
A0A1H2XAL7_9PSEU5.250e-2639.66Oxygen sensor histidine kinase NreB n=4 Tax=Saccha... [more]
A0A2P8C8B7_9ACTN7.730e-2642.86Oxygen sensor histidine kinase NreB n=3 Tax=Nocard... [more]
A0A7K2NHV1_9ACTN7.910e-2644.87Sensor histidine kinase n=4 Tax=Streptomyces TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 23..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..179
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 5..22
NoneNo IPR availableTMHMMTMhelixcoord: 61..83
IPR011712Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domainPFAMPF07730HisKA_3coord: 151..170
e-value: 9.0E-6
score: 26.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113981contigM-pyrifera_M_contig113981:5..541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113981.2897.1mRNA_M-pyrifera_M_contig113981.2897.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113981 5..541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113981.2897.1 ID=prot_M-pyrifera_M_contig113981.2897.1|Name=mRNA_M-pyrifera_M_contig113981.2897.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp
ADRQTLIAAIVLLVFYVARVVLRHRRWSELVWLWALTVAWLAAVMFVTVD
FVWVSVPLMFLYLLMLPLSPAVVVVAAIAAVVIAAEAFDGDGLSAAEVIG
PILGAGFAIVAGVGYRRLAIEFEHTQRALADLEATRDDLARSQHERGMLD
ERQRMAREVHDTIAQDLAGILFIARSPDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011712Sig_transdc_His_kin_sub3_dim/P