prot_M-pyrifera_M_contig113919.2893.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113919.2893.1
Unique Nameprot_M-pyrifera_M_contig113919.2893.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length191
Homology
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BLAST of mRNA_M-pyrifera_M_contig113919.2893.1 vs. uniprot
Match: A0A517PLL4_9PLAN (WD domain, G-beta repeat n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517PLL4_9PLAN)

HSP 1 Score: 390 bits (1002), Expect = 7.600e-125
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0 
Query:    1 NVKFISCYQQPEIKIFETVSFTEVASLKLPADKPVKAHRVSNTGKYIAVALADQVELWEVATQSRIAEINIRAKETMVDKYDWRDFLQLVREVHFTADDSKLAFVRGGIYKKFNPGFWSPGALPHVVDVLYVWDLQQKKLIYTGQPFLPNINSIGFTENGLELLVSGTKWSLANRSPDYYPETVETHTIGL 191
            NVKFISCYQQPEIKIFETVSFTEVASLKLPADKPVKAHRVSNTGKYIAVALADQVELWEVATQSRIAEINIRAKETMVDKYDWRDFLQLVREVHFTADDSKLAFVRGGIYKKFNPGFWSPGALPHVVDVLYVWDLQQKKLIYTGQPFLPNINSIGFTENGLELLVSGTKWSLANRSPD YPETVETHTIGL
Sbjct:  654 NVKFISCYQQPEIKIFETVSFTEVASLKLPADKPVKAHRVSNTGKYIAVALADQVELWEVATQSRIAEINIRAKETMVDKYDWRDFLQLVREVHFTADDSKLAFVRGGIYKKFNPGFWSPGALPHVVDVLYVWDLQQKKLIYTGQPFLPNINSIGFTENGLELLVSGTKWSLANRSPDSYPETVETHTIGL 844
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BLAST of mRNA_M-pyrifera_M_contig113919.2893.1 vs. uniprot
Match: A6CCV9_9PLAN (WD-40 repeat n=2 Tax=Gimesia maris TaxID=122 RepID=A6CCV9_9PLAN)

HSP 1 Score: 269 bits (688), Expect = 2.290e-80
Identity = 124/191 (64.92%), Postives = 158/191 (82.72%), Query Frame = 0 
Query:    1 NVKFISCYQQPEIKIFETVSFTEVASLKLPADKPVKAHRVSNTGKYIAVALADQVELWEVATQSRIAEINIRAKETMVDKYDWRDFLQLVREVHFTADDSKLAFVRGGIYKKFNPGFWSPGALPHVVDVLYVWDLQQKKLIYTGQPFLPNINSIGFTENGLELLVSGTKWSLANRSPDYYPETVETHTIGL 191
              K+I+CYQ PEIK++ET SF+EVASLKLP  +PVK+HR+SNTGKY+ VA+A+QVE+W+VATQS++AEINIRA +T V +++WRDFLQ +RE+ F ADDS+LAFVRG + KKF PG+W+PGALPHVV+VLYVWDL+Q+KL+Y G PF PNIN+I FT+   ELL+SGT+WSL    P   PET ET +I L
Sbjct:  649 GAKYITCYQHPEIKVYETESFSEVASLKLPGTEPVKSHRISNTGKYLVVAVAEQVEIWDVATQSKLAEINIRAVQTKVYEFEWRDFLQHIREICFNADDSQLAFVRGVVIKKFRPGYWAPGALPHVVNVLYVWDLEQQKLVYQGIPFQPNINAIEFTDTENELLISGTEWSLVEFEPGARPETRETCSIKL 839
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113919.2893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A517PLL4_9PLAN7.600e-12599.48WD domain, G-beta repeat n=8 Tax=Gimesia TaxID=164... [more]
A6CCV9_9PLAN2.290e-8064.92WD-40 repeat n=2 Tax=Gimesia maris TaxID=122 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..180
e-value: 2.9E-7
score: 31.8
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 8..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113919contigM-pyrifera_M_contig113919:2..574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113919.2893.1mRNA_M-pyrifera_M_contig113919.2893.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113919 2..574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113919.2893.1 ID=prot_M-pyrifera_M_contig113919.2893.1|Name=mRNA_M-pyrifera_M_contig113919.2893.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp
NVKFISCYQQPEIKIFETVSFTEVASLKLPADKPVKAHRVSNTGKYIAVA
LADQVELWEVATQSRIAEINIRAKETMVDKYDWRDFLQLVREVHFTADDS
KLAFVRGGIYKKFNPGFWSPGALPHVVDVLYVWDLQQKKLIYTGQPFLPN
INSIGFTENGLELLVSGTKWSLANRSPDYYPETVETHTIGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf