mRNA_M-pyrifera_M_contig101358.289.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: A0A354PB63_9PLAN (Restriction endonuclease subunit S (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A354PB63_9PLAN) HSP 1 Score: 256 bits (653), Expect = 2.190e-84 Identity = 116/172 (67.44%), Postives = 143/172 (83.14%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 MSFP Y+DY++SG+EWLG+VP HW LR+I+HIA + GGGTP+REK EYW GDIPWVSPKDMK E I AEE IT LGL+NS+T+ G +LMVIRSGILQHTLPV+I+ VP A+NQD+KAF F + C+P+FF RW QGLND LL+AWAN+GATVES++Q LL+++ IPLP Sbjct: 1 MSFPRYRDYKDSGVEWLGEVPEHWSLRRIRHIAAISGGGTPSREKPEYWQGDIPWVSPKDMKTEAICDAEEHITQLGLENSTTALYPAGTLLMVIRSGILQHTLPVSISEVPCAINQDLKAFQFFPDYCVPEFFLRWAQGLNDHLLLAWANEGATVESMNQTLLQSSIIPLP 172
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: UPI00141FC93C (restriction endonuclease subunit S n=1 Tax=Pseudomonas sp. OTU750018 TaxID=2709708 RepID=UPI00141FC93C) HSP 1 Score: 243 bits (619), Expect = 5.870e-76 Identity = 113/172 (65.70%), Postives = 136/172 (79.07%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 MSFP Y +Y++SG+EWLGKVP HW + K+KH + VGGGTP+R+KLE+WNGDIPWVSPKDMK E I+ AEE IT+ GL +SS+S + RVLMV+RSGIL+HT+PVAIN VPVALNQDMKA F +E C+ FF RWVQGLND LL+AW+ GATV+SI L T IPLP Sbjct: 1 MSFPRYPEYKDSGVEWLGKVPGHWHISKLKHFTHFVGGGTPSRDKLEFWNGDIPWVSPKDMKSERITGAEECITEEGLLSSSSSLIAKDRVLMVVRSGILKHTIPVAINDVPVALNQDMKALKFAREKCLSSFFWRWVQGLNDRLLLAWSKPGATVDSIEHDYLAETRIPLP 172
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: UPI000F079549 (restriction endonuclease subunit S n=1 Tax=Burkholderia pseudomallei TaxID=28450 RepID=UPI000F079549) HSP 1 Score: 236 bits (602), Expect = 2.200e-73 Identity = 111/172 (64.53%), Postives = 131/172 (76.16%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 MS P Y++Y++SG+ WLG+VP+ W L K+KH+A GGGTPNRE +YW GDIPWVSPKDMK E IS +EERIT+ GL+ S+TS GRVLMV+RSGIL+HT+PVAIN V VALNQDMKA FD+ C +FF RW QGLN LL+AWA QGATVESI L T IPLP Sbjct: 1 MSLPTYREYQDSGVAWLGRVPATWSLAKLKHVARFSGGGTPNRENADYWGGDIPWVSPKDMKTEEISGSEERITEAGLEGSATSLVPPGRVLMVVRSGILKHTIPVAINRVDVALNQDMKALDFDQVKCNGKFFLRWTQGLNGQLLLAWAKQGATVESIEHQYLAETIIPLP 172
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: UPI000C9A2941 (restriction endonuclease subunit S n=1 Tax=Pseudomonas TaxID=286 RepID=UPI000C9A2941) HSP 1 Score: 236 bits (601), Expect = 4.240e-73 Identity = 112/172 (65.12%), Postives = 133/172 (77.33%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 MSFPAY Y++SG+EWLG VP+HW L K+KHIA GGGTP+R+ L YWNG+IPW+SPKDMK+E I SAEE IT GL+NS+TS G +L+V+RSGIL+HT+P AIN V VALNQDMKA FD + I +FF RW+QG ND LL AW QGATVESI Q L +TTIPLP Sbjct: 1 MSFPAYTAYKDSGVEWLGDVPAHWTLHKLKHIARFSGGGTPSRDNLIYWNGNIPWISPKDMKVELIISAEESITAEGLQNSTTSLVPPGAILIVVRSGILKHTIPAAINKVEVALNQDMKALRFDPKLAIGKFFLRWIQGFNDQLLHAWLKQGATVESIEQDYLSDTTIPLP 172
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: A0A1N6S9F4_9BURK (Type I restriction enzyme, S subunit n=1 Tax=Pseudacidovorax sp. RU35E TaxID=1907403 RepID=A0A1N6S9F4_9BURK) HSP 1 Score: 234 bits (598), Expect = 5.770e-73 Identity = 111/172 (64.53%), Postives = 130/172 (75.58%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 M P Y +Y+NSGI+WLGKVP HW L K+KHIA GGGTP+REK EYWNG IPWVSPKDMK E I AEE IT GL+NS+ S G+VL+V+RSGIL+HT+PVA N V VALNQDMKA +FD TC +FF RWVQGLND LL++W+ +GATVESI L T +PLP Sbjct: 1 MMLPQYPEYKNSGIDWLGKVPIHWMLAKLKHIARFTGGGTPSREKPEYWNGAIPWVSPKDMKAELIEDAEEHITRTGLENSTASLIAPGQVLIVVRSGILKHTIPVATNAVTVALNQDMKALNFDFGTCDSKFFLRWVQGLNDRLLLSWSKEGATVESIEHQYLVETLVPLP 172
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: UPI001CBE4831 (restriction endonuclease subunit S n=1 Tax=Corallococcus sp. AS-1-6 TaxID=2874599 RepID=UPI001CBE4831) HSP 1 Score: 235 bits (599), Expect = 6.540e-73 Identity = 112/172 (65.12%), Postives = 132/172 (76.74%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 MSFP Y +Y++SG+EWLGKVPSHW LRKIK+IA+ GGGTP+R++ +YWNG+IPWVSPKDMK E I AEE IT GL NS+ + R+LMV+RSGIL+HT+PVAIN PVALNQD+K+ F C P +F RWVQGLNDILL WA QGATVESI L NTTI LP Sbjct: 1 MSFPRYPEYKDSGVEWLGKVPSHWGLRKIKYIASFAGGGTPSRDRPDYWNGEIPWVSPKDMKSERIIGAEETITLDGLANSTATLIPTQRILMVVRSGILKHTIPVAINDTPVALNQDIKSIHFPTHHCNPDYFLRWVQGLNDILLSIWAKQGATVESIEHDYLSNTTIALP 172
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: A0A1Y6E9B9_9SPHN (Type I restriction enzyme, S subunit n=1 Tax=Sphingopyxis terrae subsp. ummariensis TaxID=429001 RepID=A0A1Y6E9B9_9SPHN) HSP 1 Score: 234 bits (598), Expect = 8.110e-73 Identity = 113/172 (65.70%), Postives = 130/172 (75.58%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 MSFPAY YR+SG+EWLG VPSHW K+K A GGGTPNREK EYWNGDIPWVSPKDMK E I+S+EE+IT GL +S+TS G VL+V+RSGIL+HT+PVAIN V VALNQDMKA + C P+F RWVQGLND LL+AW+ QGATVESI L T +PLP Sbjct: 1 MSFPAYSSYRDSGVEWLGDVPSHWDALKVKGFAQFSGGGTPNREKPEYWNGDIPWVSPKDMKQEVITSSEEQITVEGLASSATSKIEPGAVLLVVRSGILRHTIPVAINEVTVALNQDMKALQLNPSFCEPRFLFRWVQGLNDQLLLAWSKQGATVESIEHQYLAETLVPLP 172
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: A0A5C7VCX4_9BURK (Restriction endonuclease subunit S n=1 Tax=Pelomonas sp. TaxID=1909303 RepID=A0A5C7VCX4_9BURK) HSP 1 Score: 234 bits (597), Expect = 1.010e-72 Identity = 111/172 (64.53%), Postives = 129/172 (75.00%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 M P Y YR+SG WLG+VP+HW K+K++A GGGTPNR+ YWNGDIPWVSPKDMK E+I AEE IT +GL NS+ + G VLMV+RSGIL+HT+PVAIN VPVALNQDMKA S D+ C P FF RWVQGLND LL+AWA QGATVESI Q L +T +PLP Sbjct: 1 MRLPRYPAYRDSGTAWLGRVPAHWAPNKLKYVATFSGGGTPNRDVPAYWNGDIPWVSPKDMKAESIQGAEECITAVGLSNSTANLIEPGHVLMVVRSGILKHTIPVAINHVPVALNQDMKAISMDRAKCEPTFFARWVQGLNDDLLLAWAKQGATVESIEQAYLADTPLPLP 172
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: UPI00177E0655 (restriction endonuclease subunit S n=1 Tax=Pseudomonas sp. PDM18 TaxID=2769253 RepID=UPI00177E0655) HSP 1 Score: 234 bits (596), Expect = 1.800e-72 Identity = 107/172 (62.21%), Postives = 128/172 (74.42%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 MS P Y Y++SG+EW+G +P+HW L K+KH GGGTPNRE+ +W G+IPWVSPKDMK E I +EERITD GL NSST+ +VL+V+RSGIL+HT+PVAIN VPV+LNQDMKA F TC FF RWVQGLND LL+AWA QGATVESI L +T +PLP Sbjct: 1 MSLPRYSGYKDSGVEWIGCIPAHWTLPKLKHFTRFTGGGTPNREERMFWGGEIPWVSPKDMKSELIHDSEERITDAGLANSSTTLVAPNKVLLVVRSGILKHTIPVAINAVPVSLNQDMKALEFKSSTCNSGFFLRWVQGLNDSLLLAWAKQGATVESIEHSYLSDTVVPLP 172
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Match: UPI0004984E01 (restriction endonuclease subunit S n=1 Tax=Polaromonas glacialis TaxID=866564 RepID=UPI0004984E01) HSP 1 Score: 233 bits (594), Expect = 2.990e-72 Identity = 111/172 (64.53%), Postives = 132/172 (76.74%), Query Frame = 1 Query: 1 MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNGDIPWVSPKDMKLETISSAEERITDLGLKNSSTSYQREGRVLMVIRSGILQHTLPVAINIVPVALNQDMKAFSFDKETCIPQFFRRWVQGLNDILLIAWANQGATVESISQPLLENTTIPLP 516 MSF Y Y++SG+EWLG+VP HW L K+K IA+ GGGTP+RE L YWNGDIPWVSPKDMK+E I AEE IT+ GLK+S+++ GRVLMV+RSGIL+HT+PVAIN V V LNQDMKA +FD C+ +FF RWVQG ND LL+AWA QGATVESI L T +PLP Sbjct: 1 MSFARYPTYKDSGVEWLGQVPEHWSLPKLKSIASFSGGGTPSRENLAYWNGDIPWVSPKDMKVERIVGAEESITNEGLKSSASNLLPLGRVLMVVRSGILKHTIPVAINEVEVVLNQDMKALNFDARKCVGRFFLRWVQGHNDQLLLAWAKQGATVESIEHTYLAETVMPLP 172 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101358.289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101358.289.1 >prot_M-pyrifera_M_contig101358.289.1 ID=prot_M-pyrifera_M_contig101358.289.1|Name=mRNA_M-pyrifera_M_contig101358.289.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp MSFPAYKDYRNSGIEWLGKVPSHWKLRKIKHIANVVGGGTPNREKLEYWNback to top mRNA from alignment at M-pyrifera_M_contig101358:154..669+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101358.289.1 ID=mRNA_M-pyrifera_M_contig101358.289.1|Name=mRNA_M-pyrifera_M_contig101358.289.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig101358:154..669+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101358:154..669+ >mRNA_M-pyrifera_M_contig101358.289.1 ID=mRNA_M-pyrifera_M_contig101358.289.1|Name=mRNA_M-pyrifera_M_contig101358.289.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig101358:154..669+ (Macrocystis pyrifera P11B4 male)back to top |