prot_M-pyrifera_M_contig113890.2884.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113890.2884.1
Unique Nameprot_M-pyrifera_M_contig113890.2884.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
BLAST of mRNA_M-pyrifera_M_contig113890.2884.1 vs. uniprot
Match: UPI0019CE9512 (DUF4965 domain-containing protein n=2 Tax=Fibrella sp. TaxID=1871320 RepID=UPI0019CE9512)

HSP 1 Score: 53.9 bits (128), Expect = 2.980e-5
Identity = 51/172 (29.65%), Postives = 86/172 (50.00%), Query Frame = 0
Query:    8 KLTARDVTYIRFSIASLDAAPHEVQIYTDVTAEL-VTDSNSIPVFFNSTTPSTSPTILHMGASSPQPITSIGSADRVHYGSMYFSSSSPAASFSASLA-TDARIKFTVDGTLPPSSTLQNA-TVADGDPVLAIVTSFNLQAEQSSQ-SATLVLAQSLPVAIEYFGQSYPPLW 175
            ++ +R VTY+ +S+ SLD  PH+VQ+Y D  A+L V D+N+  V +N  +     T L MG+     +   G   R+ +G +Y ++ + A   S   +  +A+  +   G LP S  +    T  D  PV A+   FNL A  +   S T+++A     ++ + G+   P W
Sbjct:  145 EVLSRPVTYVTYSMRSLDGKPHDVQLYADAGADLTVNDANAQQVTWNRASAGNL-TALRMGSVDQPVLAKRGDDLRIDWGHLYLAAPNVAGLQSVLTSRANAQTVWGRTGKLPASDDVAKPRTPNDRSPVAALA--FNLGAVGAKPISRTVMIAYDDLYSLNWMGRKLRPYW 313          
BLAST of mRNA_M-pyrifera_M_contig113890.2884.1 vs. uniprot
Match: B9XAZ7_PEDPL (Uncharacterized protein n=1 Tax=Pedosphaera parvula (strain Ellin514) TaxID=320771 RepID=B9XAZ7_PEDPL)

HSP 1 Score: 52.8 bits (125), Expect = 7.510e-5
Identity = 49/172 (28.49%), Postives = 84/172 (48.84%), Query Frame = 0
Query:    8 KLTARDVTYIRFSIASLDAAPHEVQIYTDVTAELVTDSNSIPVFFNSTTPSTSPTILHMGASSPQPITSIGSADRVHYGSMYFSSSSPAASFSASLATDARI--KFTVDGTLPPSSTLQNA-TVADGDPVLAIVTSFNL-QAEQSSQSATLVLAQSLPVAIEYFGQSYPPLW 175
            ++ AR VTY+ +S+ S+D + H+VQIY   +++LV +     V + +   +   T+L +G      + S G   R+++G  Y ++  PAA   +S+ +   +   F  +G LP     +    V D  P LA V  FNL +         +++A     +I+YFGQ   P W
Sbjct:  137 EVLARPVTYLTWSVHSVDGSKHKVQIYDSTSSQLVVNQEQEQVTW-AREQAGDLTLLKVGTEEQPVLRSSGDDHRINWGYAYVAA--PAAQSKSSMGSGETMARSFARNGDLPDEDIKKMPRAVHDQQPALAFV--FNLGEVAAKPIMRQVMIAYDEVYSIKYFGQKLQPYW 303          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113890.2884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI0019CE95122.980e-529.65DUF4965 domain-containing protein n=2 Tax=Fibrella... [more]
B9XAZ7_PEDPL7.510e-528.49Uncharacterized protein n=1 Tax=Pedosphaera parvul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033433Domain of unknown function DUF5127PFAMPF17168DUF5127coord: 9..176
e-value: 1.1E-24
score: 87.6
NoneNo IPR availablePANTHERPTHR31987FAMILY NOT NAMEDcoord: 9..175
NoneNo IPR availablePANTHERPTHR31987:SF1coord: 9..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113890contigM-pyrifera_M_contig113890:36..563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113890.2884.1mRNA_M-pyrifera_M_contig113890.2884.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113890 36..563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113890.2884.1 ID=prot_M-pyrifera_M_contig113890.2884.1|Name=mRNA_M-pyrifera_M_contig113890.2884.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
PGTTQGDKLTARDVTYIRFSIASLDAAPHEVQIYTDVTAELVTDSNSIPV
FFNSTTPSTSPTILHMGASSPQPITSIGSADRVHYGSMYFSSSSPAASFS
ASLATDARIKFTVDGTLPPSSTLQNATVADGDPVLAIVTSFNLQAEQSSQ
SATLVLAQSLPVAIEYFGQSYPPLWT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033433DUF5127