mRNA_M-pyrifera_M_contig11389.2883.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI) HSP 1 Score: 383 bits (983), Expect = 1.070e-128 Identity = 209/272 (76.84%), Postives = 234/272 (86.03%), Query Frame = 1
Query: 1 GTRLARSLSFGNIRFPSLAMKVEEEEEEAVDPEMLALQSENDASVEAVLAVIESEGWEHVTRKSGVVVVRKFMXXXXXXXXXXXRSERGVVDEAAAAKFACVKATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRAVEHSSARRGKKYVRAEILIASNIMRPNREDPTKTDFVSVTHINPGGIADSTLGAKVVNKLCAKAPVNLLLCLEKAANSPPVPKGTKVAA 816
G R SL+FGN F + V+EEE E + EMLALQ+ENDASVEAVLAVIES+GWE VT KSGVVVVRKF+XXXXXXXXXXX RG+VDE AAAKFACVKA GTLDA AS+++ LFLDNERVHEYNDNC+ VRDLERLS DTKVSWA TP+Y PFKARDFVT VHYRTL+DGTM+V+NR VEH +ARRGKKYVRAEILIA+NIMRPNREDP+KTDF+SVTHINPGGIADS +GAK+VNKLCAKAPVNLL+ LE++ANS PVPK AA
Sbjct: 213 GRRGRESLAFGN--FGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAA 482
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE) HSP 1 Score: 297 bits (761), Expect = 5.180e-96 Identity = 144/180 (80.00%), Postives = 162/180 (90.00%), Query Frame = 1
Query: 277 EAAAAKFACVKATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRAVEHSSARRGKKYVRAEILIASNIMRPNREDPTKTDFVSVTHINPGGIADSTLGAKVVNKLCAKAPVNLLLCLEKAANSPPVPKGTKVAA 816
E AAAKFACVKA GTLDA AS+++ LFLDNERVHEYNDNC+ VRDLERLS DTKVSWA TP+Y PFKARDFVT VHYRTL+DGTM+V+NR VEH +ARRGKKYVRAEILIA+NIMRPNREDP+KTDF+SVTHINPGGIADS +GAK+VNKLCAKAPVNLL+ LE++ANS PVP+ AA
Sbjct: 238 EEAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPREEVAAA 417
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: A0A835YQ35_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ35_9STRA) HSP 1 Score: 214 bits (546), Expect = 3.740e-67 Identity = 103/158 (65.19%), Postives = 126/158 (79.75%), Query Frame = 1
Query: 310 ATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRAVEHSSARRGKKYVRAEILIASNIMRPNREDPTKTDFVSVTHINPGGIADSTLGAKVVNKLCAKAPVNLLLCLEKAANS 783
A GTL A A ++F+LF N+RVHEYNDNC VRDLE +S +K++WA +P++GPFKARDFVTVV Y TL DGT+ V+NR V H++A K YVRAEILIA+N+MR N DP KTDFV+V H+NPGG+ADSTLGA VVN LCA+AP+ LL LE+AANS
Sbjct: 2 ARGTLAAHAEDLFALFQSNDRVHEYNDNCADVRDLEVVSQHSKITWARSPRFGPFKARDFVTVVSYTTLADGTLAVVNRPVNHAAAPATKDYVRAEILIATNMMRANAHDPRKTDFVTVAHVNPGGVADSTLGANVVNMLCAQAPLKLLQALERAANS 159
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA) HSP 1 Score: 208 bits (529), Expect = 2.650e-62 Identity = 99/223 (44.39%), Postives = 149/223 (66.82%), Query Frame = 1
Query: 121 NDASVEAVLAVIESEGWEHVTRKSGVVVVRKFMXXXXXXXXXXXRSERGVVDEAAAAKFACVKATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRAVEHSSARRGKKYVRAEILIASNIMRPNREDPTKTDFVSVTHINPGGIADSTLGAKVVNKLCAKAPVNLLLCLEKAANSPP 789
N A+V+++LAV+ GW V+ + +R ++ E D+ AAAKF+CVKAT L+A +V+ LFLDN +VHEYN++C+ + D+ER+S DTKV+W+ T +GPFK RDFVT+VHYR DGT++V+NR H ++ RAE+L+A N+MRP + D +KT+F +TH+NPGG+ ++ LGA +VN++C++ PV+ + LE+AA S P
Sbjct: 82 NQANVDSMLAVVRGAGWRQVSSTNDHNRIRVYLKSVTPGTHL----ETEAADDVAAAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAAQSHP 300
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: A0A7S3UPT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPT8_HETAK) HSP 1 Score: 201 bits (511), Expect = 7.400e-59 Identity = 113/245 (46.12%), Postives = 154/245 (62.86%), Query Frame = 1
Query: 97 EMLALQSENDASVEAVLA-VIESEGWEHVTRKSGVVVVRKFMXXXXXXXXXXXRS---------ERGVVD--EAAAAKFACVKATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRAVEHSSARRGK-KYVRAEILIASNIMRPNREDP-TKTDFVSVTHINPGGIADSTLGAKVVNKLCAKAPVNLLLCLEKAANSPP 789
E L ++N V+ +L+ V + EGW V + G+ V +KF+ S E+ + E AAKFA VKA GT++A AS ++ LFLDN RVHEYN C V+DL LS DTKV+WA +P++GP KARDF TVVH R L DGT VV+NR H A R +Y+R+E+LIA ++MRPNR+DP KTDF +TH+N GGI ++ A ++N+LCA +P++L+ LEKAA+ P
Sbjct: 145 EKAMLDAQNQRDVDRLLSEVTDDEGWGLVVERQGIKVWKKFLSPGRHSSLRDGESSSITAYDEQEQAALAAMEERAAKFAAVKAAGTINAPASSIYRLFLDNSRVHEYNSLCHKVKDLAYLSEDTKVTWACSPRFGPVKARDFCTVVHCRRLRDGTCVVVNRPAFHRGALRSDPQYIRSELLIAGHVMRPNRKDPENKTDFYVMTHVNLGGICETPPVAALINRLCASSPISLMKNLEKAASHQP 389
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC) HSP 1 Score: 187 bits (476), Expect = 1.460e-56 Identity = 88/144 (61.11%), Postives = 111/144 (77.08%), Query Frame = 1
Query: 292 KFACVKATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRAVEHSSARRGKKYVRAEILIASNIMRPNREDPTKTDFVSVTHINPGGIADSTLGAKVVN 723
+FACVKA G +DA VF LFLD+ RV EYN++CR ++D++ LS +TKV+W+A+ +YGPFKARDF TVVHYR L+DG +VV+NRA EH A R KYVR+EIL+A NIMRP+ DP KT V++THINPGG DS GA +VN
Sbjct: 16 RFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: A0A7S1HKH9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1HKH9_HEMAN) HSP 1 Score: 186 bits (473), Expect = 5.400e-55 Identity = 94/226 (41.59%), Postives = 139/226 (61.50%), Query Frame = 1
Query: 106 ALQSENDASVEAVLAVIESEGWEHVTRKSGVVVVRKFMXXXXXXXXXXXRSERGVVDEAAAAKFACVKATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRA--VEHSSARRGKKYVRAEILIASNIMRPNREDPTKTDFVSVTHINPGGIADSTLGAKVVNKLCAKAPVNLLLCLEKAA 777
A+Q+ N+ + + V+ + WEHV GV V RK + D KF C+KA T++A +V+ L D +RV EYND C + +L LS DT+++WA + KYGPFKARDF+T VH+R + DGT+VV++++ +E ++ G YVR E+L+A N+MRP+ DPTKT+F ++ H+NPGG AD+ LG+++VN +C PVN + LE AA
Sbjct: 21 AVQTHNNELIGRLFNVMGGDDWEHVLCLGGVNVYRK-----------------RITDVPGGEKFYCIKAVRTINARPIDVYDLLKDPQRVSEYNDECALTEELPPLSDDTRLTWACSKKYGPFKARDFITRVHHRKMTDGTLVVMSQSEDIEWERSQPGTDYVRTEVLLAGNVMRPDPTDPTKTEFTTIAHVNPGGAADTPLGSRLVNHICTHGPVNFINKLEIAA 229
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE) HSP 1 Score: 191 bits (486), Expect = 4.280e-53 Identity = 109/267 (40.82%), Postives = 151/267 (56.55%), Query Frame = 1
Query: 76 EEEAVDPEMLALQSENDASVEAVLAVIESEGWEHVTRKSGVVVVRKFMXXXXXXXXXXXRSE-----------------------RGVVDEAAAA----------KFACVKATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRAVEHSSARRGKKYVRAEILIASNIMRPNREDPTKTDFVSVTHINPGGIADSTLGAKVVNKLCAKAPVNLLLCLEKAA 777
E EA +M LQ D V+ V+ V+ +GWE V + GVVV R+++ + G D+ A +FACVKA+ L V+ LF DN RV EYN++CR V+DLE LS D+K++WAA+ + GPFKARDF T+VH+RTL DGT+ +++ VEH +A R +YVR+EIL+A N MRP DP++T+F+ VTH+NPGG A++ GA +VN LC +PV + LE AA
Sbjct: 261 EGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGRVEGSADDPAPVGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 527
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI) HSP 1 Score: 190 bits (483), Expect = 5.550e-53 Identity = 111/267 (41.57%), Postives = 155/267 (58.05%), Query Frame = 1
Query: 76 EEEAVDPEMLALQSENDASVEAVLAVIESEGWEHVTRKSGVVVVRKFMXXXXXXXXXXX-------------RSERG-----------------VVDEAAAAK---FACVKATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRAVEHSSARRGKKYVRAEILIASNIMRPNREDPTKTDFVSVTHINPGGIADSTLGAKVVNKLCAKAPVNLLLCLEKAA 777
E EA +M LQ D V+ V+ V+ +GWE V + GVVV R+++ X ++E V D++ +K FACVKA+ L V+ LF DN RV EYN++CR V+DLE LS D+K++WAA+ + GPFKARDF T+VH+RTL DGT+ +++ VEH +A R +YVR+EIL+A N MRP DP++T+F+ VTH+NPGG A++ GA +VN LC +PV + LE AA
Sbjct: 295 EGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGRVEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 561
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Match: L1J651_GUITC (START domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1J651_GUITC) HSP 1 Score: 184 bits (467), Expect = 4.590e-52 Identity = 91/209 (43.54%), Postives = 127/209 (60.77%), Query Frame = 1
Query: 142 VLAVIESEGWEHVTRKSGVVVVRKFMXXXXXXXXXXXRSERGVVDEAAAAKFACVKATGTLDAEASEVFSLFLDNERVHEYNDNCRVVRDLERLSGDTKVSWAATPKYGPFKARDFVTVVHYRTLDDGTMVVINRAVEHSSARRGKKYVRAEILIASNIMRPNREDPTKTDFVSVTHINPGGIADSTLGAKVVNKLCAKAPVNLLLCLE 768
+ V+ +GWEHV + GV V RK + KF CVKA G +DA+A++++ L D+ RV EYN+ C VRDL LS DTKV+WAA+ Y PFK RDFVT VH L+DGT V+++R+ + G YVR E+L+A N+MRP +DP KT+F ++ HINPGG AD+ LGA++ N++C PV+ + +E
Sbjct: 215 LFTVLAGDGWEHVLHQDGVDVYRKRIVDLYQGGE----------------KFYCVKAVGVIDAKAADIYELLKDSARVDEYNEECAQVRDLSALSSDTKVTWAASKTYFPFKPRDFVTRVHNTQLNDGTYVIMSRSEDVDFTDGGADYVRTEVLLAGNVMRPCPDDPNKTEFTTIAHINPGGAADTPLGAQITNRICIHGPVSFIRKIE 407 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11389.2883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11389.2883.1 >prot_M-pyrifera_M_contig11389.2883.1 ID=prot_M-pyrifera_M_contig11389.2883.1|Name=mRNA_M-pyrifera_M_contig11389.2883.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=273bp GTRLARSLSFGNIRFPSLAMKVEEEEEEAVDPEMLALQSENDASVEAVLAback to top mRNA from alignment at M-pyrifera_M_contig11389:4395..7717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11389.2883.1 ID=mRNA_M-pyrifera_M_contig11389.2883.1|Name=mRNA_M-pyrifera_M_contig11389.2883.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3323bp|location=Sequence derived from alignment at M-pyrifera_M_contig11389:4395..7717- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11389:4395..7717- >mRNA_M-pyrifera_M_contig11389.2883.1 ID=mRNA_M-pyrifera_M_contig11389.2883.1|Name=mRNA_M-pyrifera_M_contig11389.2883.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1638bp|location=Sequence derived from alignment at M-pyrifera_M_contig11389:4395..7717- (Macrocystis pyrifera P11B4 male)back to top |