mRNA_M-pyrifera_M_contig113877.2880.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: A0A0D5M2D7_9GAMM (Phosphoglycerate dehydrogenase n=3 Tax=root TaxID=1 RepID=A0A0D5M2D7_9GAMM) HSP 1 Score: 345 bits (886), Expect = 7.160e-118 Identity = 176/191 (92.15%), Postives = 183/191 (95.81%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AFKQLEGH+VT+YHDTLTDLDALSA+F AEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVD+EACRR GVTVM GTGSPYAAAELTWGLVL+AMR+IPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRA AG +VAESQA LFQRSDVLSLHLRLN
Sbjct: 18 AFKQLEGHDVTIYHDTLTDLDALSARFQDAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDIEACRRHGVTVMAGTGSPYAAAELTWGLVLAAMRHIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRAAAAGLEVAESQAALFQRSDVLSLHLRLN 208
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: G4F4Z5_9GAMM (D-isomer specific 2-hydroxyacid dehydrogenase n=8 Tax=Halomonas TaxID=2745 RepID=G4F4Z5_9GAMM) HSP 1 Score: 343 bits (879), Expect = 8.310e-117 Identity = 175/191 (91.62%), Postives = 183/191 (95.81%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AFKQLEGH+VTVYHDTLT+LDALSA+F AEALVLIRERTPITAALL RLPNLKVISQTGGGAAHVDM ACRR GVTVM GTGSPY+AAELTWGLVL+AMR+IPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRA+EAG +VAESQA LFQRSDVLSLHLRLN
Sbjct: 18 AFKQLEGHDVTVYHDTLTNLDALSARFQDAEALVLIRERTPITAALLARLPNLKVISQTGGGAAHVDMAACRRHGVTVMAGTGSPYSAAELTWGLVLAAMRHIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRAVEAGLEVAESQAALFQRSDVLSLHLRLN 208
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: A0A101D2N1_9GAMM (D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A101D2N1_9GAMM) HSP 1 Score: 334 bits (856), Expect = 2.610e-113 Identity = 170/191 (89.01%), Postives = 180/191 (94.24%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AF+QLEG +VTVYHDTLTDLDALSA+F AEALVLIRERTPITAALLERLPNLKVISQTG GAAHVD+EACR+ GVTVM G GSPYAAAELTWGLVLSAMR+IPAE+ENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRA +AG +VAESQ LFQRSDVLSLHLRL+
Sbjct: 18 AFQQLEGFDVTVYHDTLTDLDALSARFQDAEALVLIRERTPITAALLERLPNLKVISQTGSGAAHVDIEACRKHGVTVMVGAGSPYAAAELTWGLVLSAMRHIPAEIENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRAADAGLEVAESQTALFQRSDVLSLHLRLS 208
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: A0A2A3XE34_9GAMM (3-phosphoglycerate dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A3XE34_9GAMM) HSP 1 Score: 333 bits (854), Expect = 5.260e-113 Identity = 169/191 (88.48%), Postives = 177/191 (92.67%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AFKQLE H+V +YHDTLTDLDALS + AEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDM ACRR GVTVM GTGSP AAAELTWGLVL+AMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAF+M VLVWGRE TRQRA+EAG DVA+SQAD FQR+DVLSLHLRLN
Sbjct: 18 AFKQLEDHDVAIYHDTLTDLDALSTRLKAAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMAACRRHGVTVMAGTGSPNAAAELTWGLVLAAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFDMEVLVWGRESTRQRAIEAGLDVAKSQADFFQRADVLSLHLRLN 208
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: A0A0D6E623_9GAMM (D-3-phosphoglycerate dehydrogenase n=21 Tax=Halomonas TaxID=2745 RepID=A0A0D6E623_9GAMM) HSP 1 Score: 332 bits (852), Expect = 1.060e-112 Identity = 168/191 (87.96%), Postives = 180/191 (94.24%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AFKQLEGH+VTVYHDTLTDLDALS +F AEALVLIRERTPITAALL+RLPNLKVISQTGGGAAHVD+ ACR G+TVMTGTGSPYAAAELTWGLVL+AMR+IPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVA YGQAFEM VLVWGREGT QRA +AG +VA++QADLFQR+DVLSLHLRLN
Sbjct: 18 AFKQLEGHDVTVYHDTLTDLDALSERFKAAEALVLIRERTPITAALLKRLPNLKVISQTGGGAAHVDIPACRHHGITVMTGTGSPYAAAELTWGLVLAAMRHIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVACYGQAFEMKVLVWGREGTLQRASDAGIEVAQTQADLFQRADVLSLHLRLN 208
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: A0A433LGC3_9GAMM (D-2-hydroxyacid dehydrogenase family protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A433LGC3_9GAMM) HSP 1 Score: 327 bits (838), Expect = 1.420e-110 Identity = 164/191 (85.86%), Postives = 178/191 (93.19%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AF+ L GHEVTVYHDTLTD+D+L +F A+ALVLIRERTPITAALLERLPNLKVISQTGGGAAHVD++ACRR G+TVMTG GSPYAAAELTWGL+LSAMR++P EVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYG+AFEM+VLVWGREGTR RALEAG VAESQ DLFQR+DVLSLHLRLN
Sbjct: 18 AFEALRGHEVTVYHDTLTDMDSLVERFHSADALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDLDACRRHGITVMTGRGSPYAAAELTWGLILSAMRHLPEEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGRAFEMDVLVWGREGTRARALEAGLAVAESQHDLFQRADVLSLHLRLN 208
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: A0A511UKS7_9GAMM (Glyoxylate reductase n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511UKS7_9GAMM) HSP 1 Score: 323 bits (829), Expect = 3.320e-109 Identity = 166/191 (86.91%), Postives = 177/191 (92.67%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AF+QL H+VTV +DTL+DLDAL A+F AEALVL+RERTPITAALL RLPNLKVISQTGGGAAHVDM ACRRQGVTVM GTGSPYAAAELTWGLVL+AMR+IPAEVENLK GRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEM VLVWGREGTRQRA AG +VA+SQADLFQR+DVLSLHLRLN
Sbjct: 18 AFQQLNDHDVTVVNDTLSDLDALVARFHEAEALVLVRERTPITAALLARLPNLKVISQTGGGAAHVDMYACRRQGVTVMVGTGSPYAAAELTWGLVLAAMRHIPAEVENLKVGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMKVLVWGREGTRQRAAGAGIEVAKSQADLFQRADVLSLHLRLN 208
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: A0A2T0V8M8_9GAMM (D-3-phosphoglycerate dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A2T0V8M8_9GAMM) HSP 1 Score: 317 bits (812), Expect = 1.270e-106 Identity = 160/191 (83.77%), Postives = 176/191 (92.15%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AF L+GH+VT+Y+DTLTDLDAL A+F AEALVLIRERTPITA LLERLPNLKVISQTGGGAAHVD++ACRR+G+TVMTG GSPYAAAELTWGL+LSAMR++P EV NLKAG WQRTLGTGLKGRTLGIFGYGKIGSLVARYG+AFEM+VLVWGREGTRQRALE G VA+SQ DLFQ +DVLSLHLRLN
Sbjct: 18 AFDLLKGHDVTIYNDTLTDLDALVARFQPAEALVLIRERTPITAELLERLPNLKVISQTGGGAAHVDLDACRRRGITVMTGRGSPYAAAELTWGLILSAMRHLPQEVANLKAGGWQRTLGTGLKGRTLGIFGYGKIGSLVARYGKAFEMDVLVWGREGTRQRALEDGLRVAQSQEDLFQSADVLSLHLRLN 208
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: A0A1U9RAQ4_9GAMM (3-phosphoglycerate dehydrogenase n=1 Tax=Halomonas sp. 'Soap Lake #7' TaxID=1962264 RepID=A0A1U9RAQ4_9GAMM) HSP 1 Score: 316 bits (809), Expect = 3.640e-106 Identity = 159/191 (83.25%), Postives = 175/191 (91.62%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AF+QL H+VTVY+DTLTDLDAL+ +F AEALVLIRERTPITA LL+RLP LKVISQTGGGAAHVD+ AC+RQGVTVM G GSPYAAAELTWGL+L+AMR+IP EV NLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMN+LVWGREGTRQRA EAG +AESQ +LF++SDVLSLHLRLN
Sbjct: 18 AFEQLADHDVTVYNDTLTDLDALAERFKDAEALVLIRERTPITAELLKRLPKLKVISQTGGGAAHVDLAACQRQGVTVMAGKGSPYAAAELTWGLILAAMRHIPEEVANLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNLLVWGREGTRQRATEAGLAIAESQQELFEKSDVLSLHLRLN 208
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Match: A0A1H5U8J4_9GAMM (D-3-phosphoglycerate dehydrogenase n=11 Tax=Halomonas TaxID=2745 RepID=A0A1H5U8J4_9GAMM) HSP 1 Score: 311 bits (798), Expect = 1.710e-104 Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 1
Query: 1 AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLPNLKVISQTGGGAAHVDMEACRRQGVTVMTGTGSPYAAAELTWGLVLSAMRNIPAEVENLKAGRWQRTLGTGLKGRTLGIFGYGKIGSLVARYGQAFEMNVLVWGREGTRQRALEAGFDVAESQADLFQRSDVLSLHLRLN 573
AF +LEGHEVT+Y DT+TD DAL +F A+ALVLIRERTPIT +LL RLPNLK ISQTGGGAAHVDM AC+R GVTVM GTGSPYAAAELTWGLVL+AMR+IP E ENLKAGRWQRTLG GLKGRTLGIFGYGKIG L+ARYGQAFEMNVLVWGREGTR RA EAG +VA SQA+LF+RSDVLSLHLRLN
Sbjct: 18 AFAKLEGHEVTIYDDTVTDEDALVERFRDADALVLIRERTPITESLLARLPNLKAISQTGGGAAHVDMAACKRHGVTVMAGTGSPYAAAELTWGLVLAAMRHIPEEFENLKAGRWQRTLGNGLKGRTLGIFGYGKIGKLIARYGQAFEMNVLVWGREGTRTRAAEAGLEVAASQAELFERSDVLSLHLRLN 208 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113877.2880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113877.2880.1 >prot_M-pyrifera_M_contig113877.2880.1 ID=prot_M-pyrifera_M_contig113877.2880.1|Name=mRNA_M-pyrifera_M_contig113877.2880.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp AFKQLEGHEVTVYHDTLTDLDALSAQFLGAEALVLIRERTPITAALLERLback to top mRNA from alignment at M-pyrifera_M_contig113877:2..574- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113877.2880.1 ID=mRNA_M-pyrifera_M_contig113877.2880.1|Name=mRNA_M-pyrifera_M_contig113877.2880.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig113877:2..574- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113877:2..574- >mRNA_M-pyrifera_M_contig113877.2880.1 ID=mRNA_M-pyrifera_M_contig113877.2880.1|Name=mRNA_M-pyrifera_M_contig113877.2880.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig113877:2..574- (Macrocystis pyrifera P11B4 male)back to top |