mRNA_M-pyrifera_M_contig113818.2863.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: A0A3D8QVK9_9EURO (Uncharacterized protein n=1 Tax=Aspergillus mulundensis TaxID=1810919 RepID=A0A3D8QVK9_9EURO) HSP 1 Score: 64.7 bits (156), Expect = 1.030e-9 Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 19 VRNELGQTELHRAAMANKVDKLFTLLQEGADVNAIDNNCFTPLHAAASLGNLSSCMMLLQESDVDVEKVTADQSTVLHFA 258
R GQ LH AA A+ L+++GADVNA DN+ FTPLH AA +G+ S C +LLQ VD++ + + + LH A
Sbjct: 628 ARGYKGQIPLHYAARADAAGIAKLLIEKGADVNAEDNDRFTPLHLAAEIGSQSICALLLQTGKVDIDANSKNGWSPLHLA 707
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: A0A814KSZ7_9BILA (Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A814KSZ7_9BILA) HSP 1 Score: 63.5 bits (153), Expect = 2.520e-9 Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 16 EVRNELGQTELHRAAMANKVDKLFTLLQEGADVNAIDNNCFTPLHAAASLGNLSSCMMLL-QESDVDVEKVTADQSTVLHFAATFQGNDGSASKVLRMLELIKCKGADLHAVNK 354
++RN+ G++ +H+ + ++ L++EG VN IDNN +TPLH A+S+G++S +LL ++++++ +Q TVLH A + + S K L LE GAD H NK
Sbjct: 292 DIRNDKGESLIHQVVKKGDITRVKQLIEEGHSVNTIDNNSWTPLHEASSMGDISLMELLLANNANINIQG-GQEQMTVLHEALLNENINESIIKFL--LE----NGADPHIKNK 398
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: A0A818N517_9BILA (Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818N517_9BILA) HSP 1 Score: 63.5 bits (153), Expect = 2.650e-9 Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 16 EVRNELGQTELHRAAMANKVDKLFTLLQEGADVNAIDNNCFTPLHAAASLGNLSSCMMLL-QESDVDVEKVTADQSTVLHFAATFQGNDGSASKVLRMLELIKCKGADLHAVNK 354
++RN+ G++ +H+ + ++ L++EG VN IDNN +TPLH A+S+G++S +LL ++++++ +Q TVLH A + + S K L LE GAD H NK
Sbjct: 1036 DIRNDKGESLIHQVVKKGDITRVKQLIEEGHSVNTIDNNSWTPLHEASSMGDISLMELLLANNANINIQG-GQEQMTVLHEALLNENINESIIKFL--LE----NGADPHIKNK 1142
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: A0A814AFX7_9BILA (Hypothetical protein n=5 Tax=Rotaria sordida TaxID=392033 RepID=A0A814AFX7_9BILA) HSP 1 Score: 61.6 bits (148), Expect = 1.190e-8 Identity = 40/114 (35.09%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 16 EVRNELGQTELHRAAMANKVDKLFTLLQEGADVNAIDNNCFTPLHAAASLGNLSSCMMLL-QESDVDVEKVTADQSTVLHFAATFQGNDGSASKVLRMLELIKCKGADLHAVNK 354
++RN+ G++ +H+A + ++ L++EG VN IDNN +TPLH A+S+G++ +LL ++++V+ +Q TVLH A + + K L LE GAD H NK
Sbjct: 322 DIRNDKGESLIHQAVKKADIIRVKQLIEEGHPVNTIDNNSWTPLHEASSMGDIPLMELLLANNANINVQG-GEEQMTVLHEALLNENTNECVIKFL--LE----NGADSHIKNK 428
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: A0A7J8C3T9_ROUAE (Protein phosphatase 1 regulatory subunit 16A n=1 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8C3T9_ROUAE) HSP 1 Score: 56.2 bits (134), Expect = 6.140e-7 Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 16 EVRNELGQTELHRAAMANKVDKLFTLLQEGADVNAIDNNCFTPLHAAASLGNLSSCMMLLQESDVDVEKVTADQSTVLHFAATFQGNDGSASKVLRMLELIKCKGADLHAVN 351
++ NE G T LH++ + + + + LL+ GADVNA D+ C+TPLHAAA+ G+L +L+ S + TA ++ A+T SAS C GADL AVN
Sbjct: 98 DLANEDGLTALHQSCIDDFREMVQQLLEAGADVNARDSECWTPLHAAATCGHLRLVELLIARSRPRACRRTASGRGLV--ASTL-----SAS----------CSGADLLAVN 192
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: A0A8C5BEB2_GADMO (Uncharacterized protein n=9 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5BEB2_GADMO) HSP 1 Score: 56.2 bits (134), Expect = 9.500e-7 Identity = 33/94 (35.11%), Postives = 55/94 (58.51%), Query Frame = 1
Query: 19 VRNELGQTELHRAAMANKVDKLFTLLQEGADVNAIDNNCFTPLHAAASLGNLSSCMMLLQESDVDVEKVTADQSTVLHFAATFQGNDGSASKVL 300
R+ G++ LH AA + KVD L +L +GA+VNA+D + + L AA G + MLLQ++ D+ + + +T LH A + +G++ A +L
Sbjct: 774 TRDPKGRSPLHAAAYSEKVDGLQLVLDQGAEVNAVDGSGRSALMVAADRGQSMAVEMLLQQAKPDLTLLDVNNNTALHLACS-KGHEMCALLIL 866
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: UPI001CF3D80C (transient receptor potential cation channel subfamily A member 1 homolog n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3D80C) HSP 1 Score: 56.2 bits (134), Expect = 9.600e-7 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 1
Query: 91 LLQEGADVNAIDNNCFTPLHAAASLGNLSSCMMLLQESDVDVEKVTADQSTVLHFAATFQGNDGSASKVLRMLELIKCKGADLHA 345
L+Q+G DVN DN +PLH AAS GNL++ LLQ + +++ A +ST LH AA DG+ V +L+ GAD+ A
Sbjct: 194 LVQQGGDVNVCDNYGLSPLHYAASKGNLTAVRELLQCDGIKIDQKDASRSTPLHCAAA----DGAVEVVKALLDA----GADVTA 270
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: UPI00077AD5DC (transient receptor potential cation channel subfamily A member 1 homolog isoform X1 n=3 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AD5DC) HSP 1 Score: 56.2 bits (134), Expect = 9.600e-7 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 1
Query: 91 LLQEGADVNAIDNNCFTPLHAAASLGNLSSCMMLLQESDVDVEKVTADQSTVLHFAATFQGNDGSASKVLRMLELIKCKGADLHA 345
L+Q+G DVN DN +PLH AAS GNL++ LLQ + +++ A +ST LH AA DG+ V +L+ GAD+ A
Sbjct: 195 LVQQGGDVNVCDNYGLSPLHYAASKGNLTAVRELLQCDGIKIDQKDASRSTPLHCAAA----DGAVEVVKALLDA----GADVTA 271
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: A0A0R3TJV3_RODNA (LSDAT_euk domain-containing protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3TJV3_RODNA) HSP 1 Score: 55.8 bits (133), Expect = 1.250e-6 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 16 EVRNELGQTELHRAAMANKVDKLFTLLQEGADVNAIDNNCFTPLHAAASLGNLSSCMMLL 195
+V NE G T LH+ + N +D LL++ A+VNA DN +TPLHAAA+ GN C +L+
Sbjct: 524 DVANEDGLTALHQCCIDNNLDMCIFLLEKNANVNAKDNEQWTPLHAAATCGNKELCGILI 583
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Match: UPI001D025501 (uncharacterized protein LOC123266525 isoform X2 n=1 Tax=Cotesia glomerata TaxID=32391 RepID=UPI001D025501) HSP 1 Score: 54.7 bits (130), Expect = 3.050e-6 Identity = 33/101 (32.67%), Postives = 56/101 (55.45%), Query Frame = 1
Query: 55 AAMANKVDKLFTLLQEGADVNAIDNNCFTPL-HAAASLGNLSSCMMLLQESDVDVEKVTADQSTVLHFAATFQGNDGSASKVLRMLELIKCKGADLHAVNK 354
AA +N V+ + L++ GAD+NA D + TPL AA N +S +LL + +++ +T D+ + LHF + G D S + +L+ G D++ V+K
Sbjct: 210 AATSNNVEMMKLLIKHGADINAGDEDGITPLMKAAVESNNSASRRLLLSQPFIEINSLTDDKRSCLHFPTIWTGIDVPESSLQDLLDA----GCDVNIVSK 306 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113818.2863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113818.2863.1 >prot_M-pyrifera_M_contig113818.2863.1 ID=prot_M-pyrifera_M_contig113818.2863.1|Name=mRNA_M-pyrifera_M_contig113818.2863.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp MWEDEVRNELGQTELHRAAMANKVDKLFTLLQEGADVNAIDNNCFTPLHAback to top mRNA from alignment at M-pyrifera_M_contig113818:219..572+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113818.2863.1 ID=mRNA_M-pyrifera_M_contig113818.2863.1|Name=mRNA_M-pyrifera_M_contig113818.2863.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig113818:219..572+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113818:219..572+ >mRNA_M-pyrifera_M_contig113818.2863.1 ID=mRNA_M-pyrifera_M_contig113818.2863.1|Name=mRNA_M-pyrifera_M_contig113818.2863.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig113818:219..572+ (Macrocystis pyrifera P11B4 male)back to top |