prot_M-pyrifera_M_contig113706.2852.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig113706.2852.1
Unique Name	prot_M-pyrifera_M_contig113706.2852.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	191

Homology

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: A0A7K1Z958_9ACTN (Valine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z958_9ACTN)

HSP 1 Score: 322 bits (826), Expect = 3.220e-102
Identity = 151/187 (80.75%), Postives = 161/187 (86.10%), Query Frame = 0

Query:    5 IWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            IWIDTTRPELVPSCV LVAHPDDERYQP FD VTV SPVFGVE+P+R H LADP KGTGIAMICTFGDTTDVTWWRELDLPVRTV+GRDG+F  ETP+W+ S +G AAY+RLAG R K AQ EI  I  ESGD+EG PRPI HPVKFF K DKPLEIVSSRQWYIRNGGRD DLR+ LVARGDEINW
Sbjct:  240 IWIDTTRPELVPSCVALVAHPDDERYQPLFDGVTVLSPVFGVELPVRPHHLADPTKGTGIAMICTFGDTTDVTWWRELDLPVRTVVGRDGRFVNETPDWLSSPDGSAAYRRLAGKRVKQAQEEIVQILGESGDLEGTPRPIVHPVKFFEKGDKPLEIVSSRQWYIRNGGRDADLREALVARGDEINW 426

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: A0A2D8LWN9_9ACTN (Valine--tRNA ligase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LWN9_9ACTN)

HSP 1 Score: 316 bits (809), Expect = 8.120e-100
Identity = 151/191 (79.06%), Postives = 165/191 (86.39%), Query Frame = 0

Query:    1 DDAAIWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            D   IWIDTTRPELVP+CV LVAHPDDERYQPYF   TV+SP+FGVEVP+ AHELA P+KGTGIAMICTFGDTTDVTWWRELDLPVRTVI RDGKFAAETP+WI       AYQRLAGLR+KNAQ EIA + AE+G+M+G+PRPITHPVKFF K DKPLEIVSSRQWYIRNGGRD DLR  L+ RGDE+NW
Sbjct:  236 DTPDIWIDTTRPELVPACVALVAHPDDERYQPYFGG-TVSSPLFGVEVPVVAHELAQPDKGTGIAMICTFGDTTDVTWWRELDLPVRTVIQRDGKFAAETPDWIPKGAATEAYQRLAGLRSKNAQDEIAAMLAEAGEMDGDPRPITHPVKFFEKGDKPLEIVSSRQWYIRNGGRDDDLRQALIDRGDEMNW 425

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: A0A6N9EPZ2_9ACTN (Valine--tRNA ligase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EPZ2_9ACTN)

HSP 1 Score: 298 bits (763), Expect = 7.550e-93
Identity = 144/187 (77.01%), Postives = 158/187 (84.49%), Query Frame = 0

Query:    5 IWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            IWIDTTRPELVPSCV LVAHPDD RY+P F   TV +PVF VEVP+ AHELADP+KGTGIAMICTFGDT DVTWWRELDLPVRTVIGRDG+ AAE P  +ES  GRAAY RLAG  A  A+ EIA +FAESGD++GEPRPITHPVKFF K DKPLEIVSSRQWYIRNGGRD DLR  L+ RG+++NW
Sbjct:  248 IWIDTTRPELVPSCVALVAHPDDGRYRPRFGS-TVRTPVFDVEVPVVAHELADPDKGTGIAMICTFGDTADVTWWRELDLPVRTVIGRDGRLAAEPPAAVESAAGRAAYARLAGKTAVQARTEIAAVFAESGDIDGEPRPITHPVKFFEKGDKPLEIVSSRQWYIRNGGRDDDLRQALIDRGNQMNW 433

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: A0A3M2FWS9_ACTSX (Valine--tRNA ligase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FWS9_ACTSX)

HSP 1 Score: 284 bits (727), Expect = 8.370e-88
Identity = 136/191 (71.20%), Postives = 157/191 (82.20%), Query Frame = 0

Query:    1 DDAAIWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            D   I IDTTRPEL+P+CV LVAHPDDER+ P F   TVT+P+FGVEVP+ AHELADP+KGTGIAMICTFGDTTDVTWWREL LPVRTV+GRDG+F+ E P  I S+EGRAAY RLAG    +A+ EI  + AE+G+M GEPRPITHPVKFF K D+PLEIVSSRQWYIRNGGRD +LR  L+ RG +I+W
Sbjct:  235 DGGEILIDTTRPELLPACVALVAHPDDERFAPLFG-TTVTTPLFGVEVPVVAHELADPDKGTGIAMICTFGDTTDVTWWRELQLPVRTVVGRDGRFSVEPPPGITSDEGRAAYARLAGRTVASARTEIVNMLAEAGEMVGEPRPITHPVKFFEKGDRPLEIVSSRQWYIRNGGRDPELRKALLERGRQIDW 424

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: A0A199NTF6_9MICC (Valine--tRNA ligase n=6 Tax=Rothia kristinae TaxID=37923 RepID=A0A199NTF6_9MICC)

HSP 1 Score: 279 bits (714), Expect = 9.140e-86
Identity = 128/191 (67.02%), Postives = 152/191 (79.58%), Query Frame = 0

Query:    1 DDAAIWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            D   +WI+TTRPEL+PSCV LVAHP+DERY+  F   TVTSP+FGVEVP++AHELA P+KG GIAMICTFGDTTDVTWWRELDLP R +IGRDG+FA E PEWI  E+ RA Y+R+AG     AQ  +  +  E+G+MEGEPR ITHPVKF+ K DKPLEIV+SRQWY+RNGGRD D R  ++ RG EI+W
Sbjct:  241 DGQKVWIETTRPELLPSCVALVAHPEDERYRELFG-TTVTSPLFGVEVPVKAHELAQPDKGAGIAMICTFGDTTDVTWWRELDLPTRALIGRDGRFAREVPEWITDEDARARYERIAGATVFTAQKTVVEMLGENGEMEGEPRRITHPVKFYEKGDKPLEIVTSRQWYLRNGGRDEDRRRTMIERGREISW 430

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: UPI001012A6F7 (valine--tRNA ligase n=2 Tax=Kocuria TaxID=57493 RepID=UPI001012A6F7)

HSP 1 Score: 279 bits (713), Expect = 1.110e-85
Identity = 129/191 (67.54%), Postives = 151/191 (79.06%), Query Frame = 0

Query:    1 DDAAIWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            D   +WI+TTRPEL+PSCV LVAHPDD+RY+  F   TVTSP+FGVEVP++AHELA P+KG+GIAMICTFGDTTDVTWWREL L  R +IGRDG+F+ ETPEWI     R  Y+RLAG    +AQ  +  + AESG+MEGEP+ ITHPVKF+ K DKPLEIV+SRQWYIRNGGRD D R DL+ RG EI W
Sbjct:  241 DGGKVWIETTRPELLPSCVALVAHPDDDRYKDLFG-TTVTSPLFGVEVPVKAHELAQPDKGSGIAMICTFGDTTDVTWWRELQLDTRALIGRDGRFSRETPEWITDSAARERYERLAGATVFSAQKAVVEMLAESGEMEGEPKKITHPVKFYEKGDKPLEIVTSRQWYIRNGGRDADRRQDLIQRGREIQW 430

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: A0A7K1LGA8_9MICC (Valine--tRNA ligase n=1 Tax=Rothia koreensis TaxID=592378 RepID=A0A7K1LGA8_9MICC)

HSP 1 Score: 277 bits (708), Expect = 5.910e-85
Identity = 128/191 (67.02%), Postives = 152/191 (79.58%), Query Frame = 0

Query:    1 DDAAIWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            D   +WI+TTRPEL+PSCV LVAHPDDERYQ  F   TVTSP+FGVEVP++AHELA P+KG+GIAMICTFGDTTDVTWWREL L  R +IGRDG+FA ETPEWI +++ R  YQR+AG    +AQ  +  +  E+ +M+G+P+ ITHPVKF+ K DKPLEIV+SRQWYIRNGGRD D R DLV RG EI W
Sbjct:  241 DGGKVWIETTRPELLPSCVALVAHPDDERYQELFG-TTVTSPLFGVEVPVKAHELAQPDKGSGIAMICTFGDTTDVTWWRELQLDTRALIGRDGRFARETPEWITADDARERYQRMAGATVFSAQKAVVEMLRETEEMDGDPKKITHPVKFYEKGDKPLEIVTSRQWYIRNGGRDADRRQDLVNRGREIQW 430

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: A0A7M1SWR1_9MICO (Valine--tRNA ligase n=3 Tax=Ruania TaxID=626119 RepID=A0A7M1SWR1_9MICO)

HSP 1 Score: 276 bits (706), Expect = 1.460e-84
Identity = 132/190 (69.47%), Postives = 150/190 (78.95%), Query Frame = 0

Query:    2 DAAIWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            D  ++I+TTRPEL+ +CV LVAHPDDERYQP F   T TSPVFGVEVP+ AH+LADPEKG GIAMICTFGDTTDVTWWREL+LP RT+IGRDG+  AE P  I S  G AAY+RL GL   +AQ  +  +  ESGD+ GEPR I+HPVKFF K DKPLEIVSSRQWY+RNGGRD DLR+ LV RG EI W
Sbjct:  248 DGPVFIETTRPELLAACVALVAHPDDERYQPLFGS-TATSPVFGVEVPVLAHQLADPEKGAGIAMICTFGDTTDVTWWRELNLPTRTIIGRDGRILAEPPAEITSAGGLAAYERLVGLTVFSAQKTMVELLTESGDLHGEPRKISHPVKFFEKGDKPLEIVSSRQWYVRNGGRDADLRESLVKRGKEITW 436

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: A0A2E0ZU38_9ACTN (Valine--tRNA ligase n=2 Tax=root TaxID=1 RepID=A0A2E0ZU38_9ACTN)

HSP 1 Score: 275 bits (704), Expect = 2.640e-84
Identity = 133/191 (69.63%), Postives = 154/191 (80.63%), Query Frame = 0

Query:    1 DDAAIWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            D   + I TTRPELV SCV LVAHPDDERYQP F   TVT+PVFGVEVP+RAH LADPEKGTGIAMICTFGDTTDVTWWREL+LPVR V+ R+G+F A+ P+ ++SE G AAY RLAG    +AQ E+  I +E+G++ G+P PITHPVKFF K DKPLEIV+SRQWYIRNGGRDT+L   LVARG E+ W
Sbjct:  247 DGDDLLIATTRPELVVSCVALVAHPDDERYQPLFG-TTVTTPVFGVEVPVRAHHLADPEKGTGIAMICTFGDTTDVTWWRELNLPVRAVVNREGRFQADPPQGVDSEAGTAAYTRLAGKTVFSAQQEMVEILSETGELVGDPEPITHPVKFFEKGDKPLEIVTSRQWYIRNGGRDTELGTTLVARGAEMQW 436

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BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Match: A0A7H2BG77_9MICC (Valine--tRNA ligase n=4 Tax=Rothia TaxID=32207 RepID=A0A7H2BG77_9MICC)

HSP 1 Score: 275 bits (703), Expect = 3.410e-84
Identity = 126/191 (65.97%), Postives = 150/191 (78.53%), Query Frame = 0

Query:    1 DDAAIWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPIRAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAETPEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVKFFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW 191
            D   +WI+TTRPEL+P+CV LVAHPDDERYQP F    VTSP+FGVEV ++AH LA P+KG GIAM+CTFGDTTDVTWWREL L  R +IGRDG+FA ETPEWI S EGR  Y+R+AG    +AQ  +  +  E+G+MEGEP+ I HPVKF+ K DKPLEIV+SRQWYIRNGGRD D R+ L+ RG E+NW
Sbjct:  241 DGEKVWIETTRPELLPACVALVAHPDDERYQPLFG-TKVTSPLFGVEVEVKAHPLAQPDKGAGIAMVCTFGDTTDVTWWRELQLDTRALIGRDGRFAKETPEWITSAEGRERYERMAGATVFSAQKAVVEMLVETGEMEGEPKKIMHPVKFYEKGDKPLEIVASRQWYIRNGGRDADRREKLIERGREMNW 430

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig113706.2852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7K1Z958_9ACTN	3.220e-102	80.75	Valine--tRNA ligase n=2 Tax=Acidimicrobiaceae bact...	[more]
A0A2D8LWN9_9ACTN	8.120e-100	79.06	Valine--tRNA ligase n=7 Tax=Acidimicrobiaceae bact...	[more]
A0A6N9EPZ2_9ACTN	7.550e-93	77.01	Valine--tRNA ligase n=8 Tax=Acidimicrobiaceae bact...	[more]
A0A3M2FWS9_ACTSX	8.370e-88	71.20	Valine--tRNA ligase n=1 Tax=Actinomyces sp. TaxID=...	[more]
A0A199NTF6_9MICC	9.140e-86	67.02	Valine--tRNA ligase n=6 Tax=Rothia kristinae TaxID...	[more]
UPI001012A6F7	1.110e-85	67.54	valine--tRNA ligase n=2 Tax=Kocuria TaxID=57493 Re...	[more]
A0A7K1LGA8_9MICC	5.910e-85	67.02	Valine--tRNA ligase n=1 Tax=Rothia koreensis TaxID...	[more]
A0A7M1SWR1_9MICO	1.460e-84	69.47	Valine--tRNA ligase n=3 Tax=Ruania TaxID=626119 Re...	[more]
A0A2E0ZU38_9ACTN	2.640e-84	69.63	Valine--tRNA ligase n=2 Tax=root TaxID=1 RepID=A0A...	[more]
A0A7H2BG77_9MICC	3.410e-84	65.97	Valine--tRNA ligase n=4 Tax=Rothia TaxID=32207 Rep...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 152..172 e-value: 1.6E-39 score: 137.4
IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	GENE3D	3.90.740.10		coord: 3..150 e-value: 1.6E-39 score: 137.4
IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	SUPERFAMILY	50677	ValRS/IleRS/LeuRS editing domain	coord: 2..136
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 27..191 e-value: 1.1E-10 score: 40.4
None	No IPR available	PANTHER	PTHR11946:SF93	VALINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 2	coord: 4..170
None	No IPR available	PANTHER	PTHR11946	VALYL-TRNA SYNTHETASES	coord: 4..170

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig113706	contig	M-pyrifera_M_contig113706:3..575 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig113706.2852.1	mRNA_M-pyrifera_M_contig113706.2852.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig113706 3..575 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig113706.2852.1 ID=prot_M-pyrifera_M_contig113706.2852.1|Name=mRNA_M-pyrifera_M_contig113706.2852.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp
DDAAIWIDTTRPELVPSCVTLVAHPDDERYQPYFDKVTVTSPVFGVEVPI
RAHELADPEKGTGIAMICTFGDTTDVTWWRELDLPVRTVIGRDGKFAAET
PEWIESEEGRAAYQRLAGLRAKNAQAEIATIFAESGDMEGEPRPITHPVK
FFYKCDKPLEIVSSRQWYIRNGGRDTDLRDDLVARGDEINW

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR009008	Val/Leu/Ile-tRNA-synth_edit
IPR002300	aa-tRNA-synth_Ia