prot_M-pyrifera_M_contig11370.2850.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11370.2850.1
Unique Nameprot_M-pyrifera_M_contig11370.2850.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length243
Homology
BLAST of mRNA_M-pyrifera_M_contig11370.2850.1 vs. uniprot
Match: D7FQ61_ECTSI (Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences pdb|3C5R|B Chain B, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ61_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 2.070e-89
Identity = 153/242 (63.22%), Postives = 182/242 (75.21%), Query Frame = 0
Query:    1 VCARARVSARERAFSVALHSLLSRASEKEKLAXXXXXXXXXXXXXXXSTVWQAARFGVPVRRLQELMEQETKESRHTNPSEPFEQLCRRVHGVVVESKHPYPKGVRQEFEACVLGADHFFVAFDAASNATMGTGKVVLREPKAEEPAVFSPRGAYHSSNPDEARLPGVNGEPPMRVEGSSVLVTFSASYWRGVAPAGEDYGWRLVCFTADGEGTSDDAKSLIVDAERAADRAQAVDAVNVLG 242
            +CARAR +A E AFS A  SL +R SE++  A               STVW AAR+GVPVR L+E+M ++  +SR+ +PSEPF+QLCRRV GVVVES+HPYPKGVRQ+ EA V  AD F+VAFDAASNAT+G GKV L+E  A +P +F PRG Y+     EARLPGV+GE PMRV+GSSVLVTFSASYW GVAPAGEDYGWRLVCFTAD +   D AK+L+ +AERAADRA+AVDAVN  G
Sbjct:    1 MCARARETAIEAAFSSAFSSLQARRSEQKAAAACAEGERAELRASVCSTVWSAARYGVPVRTLREMMSEKMFQSRNFDPSEPFDQLCRRVEGVVVESRHPYPKGVRQDIEAYVANADSFYVAFDAASNATIGMGKVALQEFNARDPKLFFPRGPYNVDTSGEARLPGVDGERPMRVQGSSVLVTFSASYWTGVAPAGEDYGWRLVCFTADDD---DHAKALVSEAERAADRAEAVDAVNTHG 239          
BLAST of mRNA_M-pyrifera_M_contig11370.2850.1 vs. uniprot
Match: A0A6H5KVI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI9_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 4.130e-40
Identity = 78/112 (69.64%), Postives = 90/112 (80.36%), Query Frame = 0
Query:  131 MGTGKVVLREPKAEEPAVFSPRGAYHSSNPDEARLPGVNGEPPMRVEGSSVLVTFSASYWRGVAPAGEDYGWRLVCFTADGEGTSDDAKSLIVDAERAADRAQAVDAVNVLG 242
            MG GKV L+E  A +P +F PRG Y+     EARLPGV+GE PMRV+GSSVLVTFSASYW GVAPAGEDYGWRLVCFTAD +   D AK+L+ +A+RAADRA+AVDAVN LG
Sbjct:    1 MGMGKVALQEFNARDPKLFFPRGPYNGDTSSEARLPGVDGERPMRVQGSSVLVTFSASYWTGVAPAGEDYGWRLVCFTADDD---DHAKALVSEAKRAADRAEAVDAVNTLG 109          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11370.2850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ61_ECTSI2.070e-8963.22Chain A, Crystal Structure Of The Bard1 Ankyrin Re... [more]
A0A6H5KVI9_9PHAE4.130e-4069.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11370contigM-pyrifera_M_contig11370:106..4342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11370.2850.1mRNA_M-pyrifera_M_contig11370.2850.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11370 106..4342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11370.2850.1 ID=prot_M-pyrifera_M_contig11370.2850.1|Name=mRNA_M-pyrifera_M_contig11370.2850.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=243bp
VCARARVSARERAFSVALHSLLSRASEKEKLAAAAERRKAAEKAASSSTV
WQAARFGVPVRRLQELMEQETKESRHTNPSEPFEQLCRRVHGVVVESKHP
YPKGVRQEFEACVLGADHFFVAFDAASNATMGTGKVVLREPKAEEPAVFS
PRGAYHSSNPDEARLPGVNGEPPMRVEGSSVLVTFSASYWRGVAPAGEDY
GWRLVCFTADGEGTSDDAKSLIVDAERAADRAQAVDAVNVLG*
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