prot_M-pyrifera_M_contig113689.2846.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig113689.2846.1
Unique Name	prot_M-pyrifera_M_contig113689.2846.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	164

Homology

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: A0A3P6P388_ANISI (U5_2-snRNA_bdg domain-containing protein (Fragment) n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A3P6P388_ANISI)

HSP 1 Score: 194 bits (493), Expect = 1.170e-59
Identity = 96/166 (57.83%), Postives = 127/166 (76.51%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILPRSRI--EEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL + DVNLGRA FW +++ LPR++ T++W+ SF SVYS DNPNLLFDMCGFE RILP+ R+  EE+               T RDGVWNLQ++VTK+ TAQ FL+V +E++  F NRIR ++MS+G+TTFTKI NKWN++++GL+TYFREA+V T ELLD+LV+
Sbjct:   32 MRLMKHDVNLGRAVFWDIKNRLPRSVTTVEWENSFVSVYSKDNPNLLFDMCGFECRILPKCRMAAEEL---------------THRDGVWNLQNEVTKERTAQCFLKVDEESLLKFHNRIRQILMSSGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVK 182

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: A0A397AQ43_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AQ43_9STRA)

HSP 1 Score: 207 bits (526), Expect = 8.640e-59
Identity = 99/164 (60.37%), Postives = 133/164 (81.10%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILPRSRIEEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL + DVNLGRA FW +Q+ LPR++ TLDWD SF SVYS DNPNLLF+MCGFEVR+LPR R         L+DE        +DGVWNLQ+D+TK+ TAQA+L+V ++A+ TFENR+R+++MS+G+TTFTK+ANKWN++++GL+TY+RE++VQT ELLD+LV+
Sbjct: 1111 MRLMKHDVNLGRATFWDMQNRLPRSITTLDWDHSFVSVYSKDNPNLLFNMCGFEVRVLPRVR--------ALEDEFAH-----KDGVWNLQNDLTKERTAQAYLRVDEDAIKTFENRVRSILMSSGSTTFTKVANKWNAALIGLMTYYRESVVQTQELLDLLVK 1261

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: A0A397B0I6_9STRA (MPN domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B0I6_9STRA)

HSP 1 Score: 207 bits (526), Expect = 8.950e-59
Identity = 99/164 (60.37%), Postives = 133/164 (81.10%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILPRSRIEEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL + DVNLGRA FW +Q+ LPR++ TLDWD SF SVYS DNPNLLF+MCGFEVR+LPR R         L+DE        +DGVWNLQ+D+TK+ TAQA+L+V ++A+ TFENR+R+++MS+G+TTFTK+ANKWN++++GL+TY+RE++VQT ELLD+LV+
Sbjct: 1130 MRLMKHDVNLGRATFWDMQNRLPRSITTLDWDHSFVSVYSKDNPNLLFNMCGFEVRVLPRVR--------ALEDEFAH-----KDGVWNLQNDLTKERTAQAYLRVDEDAIKTFENRVRSILMSSGSTTFTKVANKWNAALIGLMTYYRESVVQTQELLDLLVK 1280

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: A0A3R7AHX1_9STRA (MPN domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AHX1_9STRA)

HSP 1 Score: 207 bits (526), Expect = 8.970e-59
Identity = 99/164 (60.37%), Postives = 133/164 (81.10%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILPRSRIEEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL + DVNLGRA FW +Q+ LPR++ TLDWD SF SVYS DNPNLLF+MCGFEVR+LPR R         L+DE        +DGVWNLQ+D+TK+ TAQA+L+V ++A+ TFENR+R+++MS+G+TTFTK+ANKWN++++GL+TY+RE++VQT ELLD+LV+
Sbjct: 1220 MRLMKHDVNLGRATFWDMQNRLPRSITTLDWDHSFVSVYSKDNPNLLFNMCGFEVRVLPRVR--------ALEDEFAH-----KDGVWNLQNDLTKERTAQAYLRVDEDAIKTFENRVRSILMSSGSTTFTKVANKWNAALIGLMTYYRESVVQTQELLDLLVK 1370

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: A0A7S1MWH0_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MWH0_HEMAN)

HSP 1 Score: 198 bits (503), Expect = 1.940e-58
Identity = 96/164 (58.54%), Postives = 129/164 (78.66%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILPRSRIEEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL + DVNLGRA FWH+++ LPR++ T++W+ SF SVYS DNPNLLF+MCGFEVRILP+ R+        L +E      T RDG+WNLQ++ TK+ TAQA L+V +E+   FENRIR ++MS+G+TTFTKIANKWN++V+GL+TY+REA++ T ELLD+LV+
Sbjct:  228 MRLMKHDVNLGRAVFWHIKNQLPRSVTTVEWENSFVSVYSKDNPNLLFNMCGFEVRILPKVRM--------LSEE-----FTHRDGIWNLQNETTKERTAQAHLRVDEESQKKFENRIRQILMSSGSTTFTKIANKWNTAVIGLMTYYREAVIHTTELLDLLVK 378

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: K0T2A8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T2A8_THAOC)

HSP 1 Score: 203 bits (517), Expect = 4.240e-58
Identity = 102/165 (61.82%), Postives = 131/165 (79.39%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILP-RSRIEEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL +RDVNLGRA FW +++ LPR++ TLDWD SF SVYSADNPNLLFDM GFEVRI P RS  + V  GG    ++V      +DGVWNLQ++ TK+ TAQA L+V +EAV  F+NRIR ++MS+GATTFTKIANKWN++++GL+TY+REA++ T ELLD+LV+
Sbjct:  412 MRLLKRDVNLGRAIFWDIKNRLPRSITTLDWDNSFVSVYSADNPNLLFDMVGFEVRIRPLRSTAKSVMGGGATPTQTVH-----KDGVWNLQNETTKEVTAQAHLRVEEEAVQAFDNRIRQILMSSGATTFTKIANKWNTALIGLMTYYREAVLNTQELLDLLVK 571

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: A0A7S3V9F7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9F7_9STRA)

HSP 1 Score: 204 bits (520), Expect = 5.770e-58
Identity = 101/164 (61.59%), Postives = 127/164 (77.44%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILPRSRIEEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL +RDVNLGR  FW +++ LPR+++TLDW+ SF SVYS DNPNLLFDM GFEVRI P      +G GG       S   T +DGVWNLQ+D TK+ TAQA LQV KEAV  F+NRIR ++MS+GATTFTKIANKWN++++GL+TY+REA++ T ELLD+LV+
Sbjct: 1319 MRLLKRDVNLGRGIFWDMKNRLPRSISTLDWENSFISVYSGDNPNLLFDMLGFEVRIQPLCANRSMGVGG----SGASPATTYKDGVWNLQNDTTKEMTAQAHLQVEKEAVQAFDNRIRQILMSSGATTFTKIANKWNTALIGLMTYYREAVLNTQELLDLLVK 1478

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: A0A448YUX1_9STRA (MPN domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A448YUX1_9STRA)

HSP 1 Score: 204 bits (520), Expect = 5.770e-58
Identity = 102/165 (61.82%), Postives = 131/165 (79.39%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILPRSRIE-EVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL RRDVNLGRA FW +++ LPR++ TLDWD SF SVYSADNPNLLFDMCGFEVRI P   I  ++ TGG ++    +   T +DGVWNLQ++ TK+ TAQA L+V   AV  F+NRIR ++MS+GATTFTKIANKWN++++GL+TY+REA++ T ELLD+LV+
Sbjct: 1347 MRLLRRDVNLGRAVFWDMKNRLPRSVTTLDWDNSFVSVYSADNPNLLFDMCGFEVRINPIKAIRRDIFTGGQVE----ANATTYKDGVWNLQNETTKEMTAQAHLRVEDSAVQAFDNRIRQILMSSGATTFTKIANKWNTALIGLMTYYREAVLNTQELLDLLVK 1507

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: A0A1V9ZGU7_9STRA (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGU7_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.460e-57
Identity = 99/164 (60.37%), Postives = 131/164 (79.88%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILPRSRIEEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL + DVNLGRA FW +++ LPR+L TL+WD SF SVYS DNPNLLF+MCGF+VRILPR R         ++DE V      +DGVWNLQ+DVTK+ TAQA+L+V + A+  FENR+R ++MS+G+TTFTK+ANKWN++++GL+TY+REA+VQT ELLD+LV+
Sbjct: 1167 MRLMKHDVNLGRATFWDMKNRLPRSLTTLEWDHSFVSVYSKDNPNLLFNMCGFDVRILPRCR--------AIEDEFVH-----KDGVWNLQNDVTKERTAQAYLRVDETAIKAFENRVRQILMSSGSTTFTKVANKWNAALIGLMTYYREAVVQTQELLDLLVK 1317

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BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Match: A0A0D2IVU7_9CHLO (Putative Pre-mRNA-splicing factor 8 like protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2IVU7_9CHLO)

HSP 1 Score: 190 bits (482), Expect = 1.480e-57
Identity = 95/164 (57.93%), Postives = 124/164 (75.61%), Query Frame = 0

Query:    1 MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDMCGFEVRILPRSRIEEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTAQAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFREAIVQTPELLDVLVR 164
            MRL + DVNLGRA FW +++ LPR+++TL+WD SF SVYS DNPNLLF M GFEVRILP+ R+              S     +DGVW LQ+  TK+ TAQAFL+V  EA+ TFENRIR ++MS+G+TTFTKIANKWN++++GL+TY+REA++ T ELLD+LV+
Sbjct:    1 MRLMKHDVNLGRAVFWDMRNRLPRSVSTLEWDNSFVSVYSRDNPNLLFSMSGFEVRILPKCRMS-------------SEHFAAKDGVWALQNLATKERTAQAFLRVDDEALKTFENRIRQVLMSSGSTTFTKIANKWNTALIGLMTYYREAVIHTQELLDLLVK 151

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig113689.2846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3P6P388_ANISI	1.170e-59	57.83	U5_2-snRNA_bdg domain-containing protein (Fragment...	[more]
A0A397AQ43_9STRA	8.640e-59	60.37	Uncharacterized protein (Fragment) n=2 Tax=Aphanom...	[more]
A0A397B0I6_9STRA	8.950e-59	60.37	MPN domain-containing protein (Fragment) n=1 Tax=A...	[more]
A0A3R7AHX1_9STRA	8.970e-59	60.37	MPN domain-containing protein n=10 Tax=Aphanomyces...	[more]
A0A7S1MWH0_HEMAN	1.940e-58	58.54	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
K0T2A8_THAOC	4.240e-58	61.82	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S3V9F7_9STRA	5.770e-58	61.59	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A448YUX1_9STRA	5.770e-58	61.82	MPN domain-containing protein n=2 Tax=Bacillariace...	[more]
A0A1V9ZGU7_9STRA	1.460e-57	60.37	Pre-mRNA-processing-splicing factor 8 n=1 Tax=Achl...	[more]
A0A0D2IVU7_9CHLO	1.480e-57	57.93	Putative Pre-mRNA-splicing factor 8 like protein n...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019581	Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding	PFAM	PF10597	U5_2-snRNA_bdg	coord: 84..164 e-value: 1.8E-33 score: 115.5
IPR042516	Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain superfamily	GENE3D	1.20.58.1750		coord: 45..164 e-value: 4.0E-43 score: 148.1
IPR027652	Pre-mRNA-processing-splicing factor 8	PANTHER	PTHR11140	PRE-MRNA SPLICING FACTOR PRP8	coord: 1..164
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..126

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig113689	contig	M-pyrifera_M_contig113689:83..574 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig113689.2846.1	mRNA_M-pyrifera_M_contig113689.2846.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig113689 83..574 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig113689.2846.1 ID=prot_M-pyrifera_M_contig113689.2846.1|Name=mRNA_M-pyrifera_M_contig113689.2846.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp
MRLFRRDVNLGRAAFWHVQSTLPRALATLDWDTSFASVYSADNPNLLFDM
CGFEVRILPRSRIEEVGTGGVLDDESVSGGVTPRDGVWNLQDDVTKQTTA
QAFLQVSKEAVDTFENRIRTLIMSTGATTFTKIANKWNSSVVGLVTYFRE
AIVQTPELLDVLVR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019581	Prp8_U5-snRNA-bd
IPR042516	Prp8_U5-snRNA-bd_sf
IPR027652	PRP8
IPR012337	RNaseH-like_sf