prot_M-pyrifera_M_contig11359.2840.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11359.2840.1
Unique Nameprot_M-pyrifera_M_contig11359.2840.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length92
Homology
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BLAST of mRNA_M-pyrifera_M_contig11359.2840.1 vs. uniprot
Match: D8LM07_ECTSI (Inosine-adenosine-guanosine-nucleoside hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM07_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.360e-16
Identity = 41/61 (67.21%), Postives = 49/61 (80.33%), Query Frame = 0 
Query:   17 TASLTTRSLAGAPMLEIK-QPFYVWDLLTVVQLVHPELFTTTEVKCDVVVDGASQGRIVRT 76
            T     R+LAGA +LE + +PF+ WDLLTV QLVHPELFTT++V+CDVVV GASQGR VRT
Sbjct:  246 TKETLLRALAGAHLLETETRPFFAWDLLTVAQLVHPELFTTSQVECDVVVGGASQGRTVRT 306
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BLAST of mRNA_M-pyrifera_M_contig11359.2840.1 vs. uniprot
Match: A0A6H5JPH9_9PHAE (IU_nuc_hydro domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH9_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 6.380e-16
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 0 
Query:   24 SLAGAPMLEIK-QPFYVWDLLTVVQLVHPELFTTTEVKCDVVVDGASQGRIVRT 76
            +LAGA +LE K +PF+ WDLLTV QLVHPELFTT++V+CDVV+ GASQGR VRT
Sbjct:  265 ALAGAHLLETKTRPFFAWDLLTVAQLVHPELFTTSQVECDVVIGGASQGRTVRT 318
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BLAST of mRNA_M-pyrifera_M_contig11359.2840.1 vs. uniprot
Match: UPI001B374E6B (Nucleoside hydrolase n=2 Tax=Micromonospora sp. C51 TaxID=2824879 RepID=UPI001B374E6B)

HSP 1 Score: 51.6 bits (122), Expect = 1.430e-5
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:   33 IKQPFYVWDLLTVVQLVHPELFTTTEVKCDVVVDGASQGRIVR 75
            +  P+  WD L    L  PELFT  +++CDVVVDGAS+GR VR
Sbjct:  245 VGSPYCCWDSLATSYLAAPELFTFDQIRCDVVVDGASEGRTVR 287
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11359.2840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM07_ECTSI2.360e-1667.21Inosine-adenosine-guanosine-nucleoside hydrolase n... [more]
A0A6H5JPH9_9PHAE6.380e-1672.22IU_nuc_hydro domain-containing protein n=1 Tax=Ect... [more]
UPI001B374E6B1.430e-553.49Nucleoside hydrolase n=2 Tax=Micromonospora sp. C5... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036452Ribonucleoside hydrolase-likeGENE3D3.90.245.10coord: 6..88
e-value: 2.5E-8
score: 35.7
IPR036452Ribonucleoside hydrolase-likeSUPERFAMILY53590Nucleoside hydrolasecoord: 25..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11359contigM-pyrifera_M_contig11359:7685..9207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11359.2840.1mRNA_M-pyrifera_M_contig11359.2840.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11359 7685..9209 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11359.2840.1 ID=prot_M-pyrifera_M_contig11359.2840.1|Name=mRNA_M-pyrifera_M_contig11359.2840.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp
STCYHRRRRRCPLPRTTASLTTRSLAGAPMLEIKQPFYVWDLLTVVQLVH
PELFTTTEVKCDVVVDGASQGRIVRTGQPNASGDGQGRSVTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036452Ribo_hydro-like