mRNA_M-pyrifera_M_contig101349.284.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101349.284.1
Unique NamemRNA_M-pyrifera_M_contig101349.284.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: A0A7S3FZ49_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3FZ49_9EUKA)

HSP 1 Score: 99.0 bits (245), Expect = 1.700e-23
Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 1
Query:    7 YQDATAAAST-MVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWTDT----EERVAD 270
            Y DA   A   +  TNP+RL LALN +VF +EIANKP EA  +AK AFD A A+LDTLG+EQYKD+T ++QLLRDNL LWT+     EE V D
Sbjct:  151 YGDALKIAEADLASTNPIRLGLALNFSVFHYEIANKPAEACSLAKRAFDEAIAELDTLGEEQYKDSTLIMQLLRDNLNLWTNEGGAREETVED 243          
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: A0A0D3DQY3_BRAOL (14_3_3 domain-containing protein n=6 Tax=Brassica TaxID=3705 RepID=A0A0D3DQY3_BRAOL)

HSP 1 Score: 99.0 bits (245), Expect = 2.190e-23
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 1
Query:    7 YQDATAAASTMVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWT-DTEERVAD 270
            Y+ A   A  + PT+P+RL LALN +VF +EI N P  A ++AK AFDAA A+LDTLG+E YKD+T ++QLLRDNL LWT D ++  AD
Sbjct:  156 YESAQENAKGLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDAAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDEAAD 244          
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: A0A7S0Q9T9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q9T9_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 4.260e-23
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 1
Query:    7 YQDATAAASTMVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWTDTEERVADAS 276
            YQ+AT A+  +  T+P+RL LALN++VF +E+A    EA D+AK AFD+A A+LDTL +E YKD+T ++QLLRDNL LWT ++E   DAS
Sbjct:  171 YQEATTASEALQSTHPIRLGLALNYSVFLYEVAGLQQEACDLAKQAFDSAIAELDTLDEESYKDSTLIMQLLRDNLTLWTSSDE--GDAS 258          
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: A0A7S0GG11_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GG11_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.950e-23
Identity = 51/90 (56.67%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    7 YQDATAAAST-MVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWTDTEERVADA 273
            YQ A+  AS  + PT+P+RL LALN +VF +EI N P  A  IAK AFD A A+LDTL +E YKD+T ++QLLRDNL LWT  +   ADA
Sbjct:   14 YQAASGVASVDLPPTHPIRLGLALNFSVFYYEILNSPERACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQSGEADA 103          
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: A0A7S3DMK8_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DMK8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.120e-23
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 1
Query:    7 YQDATAAAST-MVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWT-DTEERVAD 270
            Y  A+  AST + PT+P+RL LALN +VF +EI N P +A  IAK+AFD A A+LDTL +E YKD+T ++QLLRDNL LWT D +E  AD
Sbjct:   38 YNAASTIASTELPPTHPIRLGLALNFSVFYYEILNSPDKACQIAKSAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQQEESAD 127          
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: A0A0D6R8M8_ARACU (14_3_3 domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R8M8_ARACU)

HSP 1 Score: 94.7 bits (234), Expect = 6.870e-23
Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = 1
Query:    7 YQDATAAAST-MVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWTDTE 255
            Y++AT  A T + PT+P+RL LALN +VF +EI N P +A  +AK AFD A A+LDTL +E YKD+T ++QLLRDNL LWT +E
Sbjct:   29 YKNATEVAQTDLAPTHPIRLGLALNFSVFYYEILNSPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSSE 112          
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: A0A6D2IGS2_9BRAS (14_3_3 domain-containing protein n=4 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2IGS2_9BRAS)

HSP 1 Score: 97.4 bits (241), Expect = 8.590e-23
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 1
Query:    7 YQDATAAASTMVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWT-DTEERVAD 270
            Y+ A   A  + PT+P+RL LALN +VF +EI N P  A ++AK AFDAA A+LDTLG+E YKD+T ++QLLRDNL LWT D E+  A+
Sbjct:  156 YESAQENAKGLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDAAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMEDESAN 244          
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: A0A4S9S2L2_AURPU (Putative 14-3-3 family protein ArtA n=7 Tax=Aureobasidium TaxID=5579 RepID=A0A4S9S2L2_AURPU)

HSP 1 Score: 97.8 bits (242), Expect = 9.760e-23
Identity = 50/84 (59.52%), Postives = 64/84 (76.19%), Query Frame = 1
Query:    7 YQDATAAAST-MVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWTDTE 255
            YQ+AT  A T + PT+P+RL LALN +VF +EI N P +A  +AKAAFD A A+LDTL +E YKD+T ++QLLRDNL LWT +E
Sbjct:  174 YQNATEVAQTDLAPTHPIRLGLALNFSVFYYEILNSPDKACHLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSSE 257          
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: 1433_ENCCU (14-3-3 protein homolog n=3 Tax=Encephalitozoon TaxID=6033 RepID=1433_ENCCU)

HSP 1 Score: 97.1 bits (240), Expect = 1.180e-22
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1
Query:    7 YQDATAAASTMVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWTDTEE 258
            Y++AT  A T+ PTNP++L LALN++VF +EI N   +A  IAK AFD A  +LDTL +E Y+D+T ++QLLRDNL LWT  EE
Sbjct:  160 YKEATEKAKTLPPTNPIKLGLALNYSVFHYEILNDSEKACSIAKGAFDEAIKELDTLSEEHYRDSTLIMQLLRDNLTLWTSREE 243          
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Match: I6UMW9_ENCHA (14-3-3-like signal transduction protein n=2 Tax=Encephalitozoon TaxID=6033 RepID=I6UMW9_ENCHA)

HSP 1 Score: 97.1 bits (240), Expect = 1.180e-22
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1
Query:    7 YQDATAAASTMVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFDAAAAQLDTLGDEQYKDATAVLQLLRDNLALWTDTEE 258
            Y++AT  A T+ PTNP++L LALN++VF +EI N   +A  IAK AFD A  +LDTL +E Y+D+T ++QLLRDNL LWT  EE
Sbjct:  160 YKEATEKAKTLPPTNPIKLGLALNYSVFHYEILNDSEKACSIAKGAFDEAIKELDTLSEEHYRDSTLIMQLLRDNLTLWTSREE 243          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101349.284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3FZ49_9EUKA1.700e-2359.14Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A0D3DQY3_BRAOL2.190e-2356.1814_3_3 domain-containing protein n=6 Tax=Brassica ... [more]
A0A7S0Q9T9_9EUKA4.260e-2355.56Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0GG11_9STRA4.950e-2356.67Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S3DMK8_9STRA5.120e-2357.78Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A0D6R8M8_ARACU6.870e-2357.1414_3_3 domain-containing protein n=1 Tax=Araucaria... [more]
A0A6D2IGS2_9BRAS8.590e-2356.1814_3_3 domain-containing protein n=4 Tax=Coluteoca... [more]
A0A4S9S2L2_AURPU9.760e-2359.52Putative 14-3-3 family protein ArtA n=7 Tax=Aureob... [more]
1433_ENCCU1.180e-2255.9514-3-3 protein homolog n=3 Tax=Encephalitozoon Tax... [more]
I6UMW9_ENCHA1.180e-2255.9514-3-3-like signal transduction protein n=2 Tax=En... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101349contigM-pyrifera_M_contig101349:392..670 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score100.5
Seed ortholog evalue4.3e-19
Seed eggNOG ortholog3711.Bra016380.1-P
KEGG koko:K06630
KEGG Pathwayko04011,ko04110,ko04114,ko04151,ko04390,ko04391,ko04722,ko05169,ko05203,map04011,map04110,map04114,map04151,map04390,map04391,map04722,map05169,map05203
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the 14-3-3 family
EggNOG OGs37N1C@33090,3G98Q@35493,COG5040@1,KOG0841@2759
COG Functional cat.O
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400,ko04147
Exons1
Model size279
Cds size279
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815511.3229418-CDS-M-pyrifera_M_contig101349:391..6701622815511.3229418-CDS-M-pyrifera_M_contig101349:391..670Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101349 392..670 -
1692277444.4228024-CDS-M-pyrifera_M_contig101349:391..6701692277444.4228024-CDS-M-pyrifera_M_contig101349:391..670Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101349 392..670 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101349.284.1prot_M-pyrifera_M_contig101349.284.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101349 392..670 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101349.284.1

>prot_M-pyrifera_M_contig101349.284.1 ID=prot_M-pyrifera_M_contig101349.284.1|Name=mRNA_M-pyrifera_M_contig101349.284.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp
KRYQDATAAASTMVPTNPMRLSLALNHAVFRHEIANKPGEAWDIAKAAFD
AAAAQLDTLGDEQYKDATAVLQLLRDNLALWTDTEERVADAS*
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mRNA from alignment at M-pyrifera_M_contig101349:392..670-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101349.284.1 ID=mRNA_M-pyrifera_M_contig101349.284.1|Name=mRNA_M-pyrifera_M_contig101349.284.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=279bp|location=Sequence derived from alignment at M-pyrifera_M_contig101349:392..670- (Macrocystis pyrifera P11B4 male)
AAGAGGTACCAAGATGCGACAGCAGCTGCATCCACAATGGTCCCCACAAA TCCTATGCGTCTCTCTCTCGCCCTCAATCACGCAGTGTTTCGACACGAAA TTGCCAACAAACCTGGAGAAGCATGGGACATTGCCAAAGCAGCATTCGAT GCCGCTGCTGCACAACTTGACACCCTCGGAGATGAGCAATACAAAGACGC CACAGCCGTGCTCCAACTCCTACGAGACAATCTTGCTCTGTGGACAGACA CCGAAGAAAGAGTTGCTGACGCTTCGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101349:392..670-

>mRNA_M-pyrifera_M_contig101349.284.1 ID=mRNA_M-pyrifera_M_contig101349.284.1|Name=mRNA_M-pyrifera_M_contig101349.284.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig101349:392..670- (Macrocystis pyrifera P11B4 male)
AAGAGGTACCAAGATGCGACAGCAGCTGCATCCACAATGGTCCCCACAAA
TCCTATGCGTCTCTCTCTCGCCCTCAATCACGCAGTGTTTCGACACGAAA
TTGCCAACAAACCTGGAGAAGCATGGGACATTGCCAAAGCAGCATTCGAT
GCCGCTGCTGCACAACTTGACACCCTCGGAGATGAGCAATACAAAGACGC
CACAGCCGTGCTCCAACTCCTACGAGACAATCTTGCTCTGTGGACAGACA
CCGAAGAAAGAGTTGCTGACGCTTCGTGAAAGAGGTACCAAGATGCGACA
GCAGCTGCATCCACAATGGTCCCCACAAATCCTATGCGTCTCTCTCTCGC
CCTCAATCACGCAGTGTTTCGACACGAAATTGCCAACAAACCTGGAGAAG
CATGGGACATTGCCAAAGCAGCATTCGATGCCGCTGCTGCACAACTTGAC
ACCCTCGGAGATGAGCAATACAAAGACGCCACAGCCGTGCTCCAACTCCT
ACGAGACAATCTTGCTCTGTGGACAGACACCGAAGAAAGAGTTGCTGACG
CTTCGTGA
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