mRNA_M-pyrifera_M_contig101348.283.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101348.283.1
Unique NamemRNA_M-pyrifera_M_contig101348.283.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: A0A812TWD4_9DINO (OSBPL5 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TWD4_9DINO)

HSP 1 Score: 150 bits (380), Expect = 5.770e-41
Identity = 67/119 (56.30%), Postives = 89/119 (74.79%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDFHQ 357
            E+FA  W+HDDGS++QY+GEQV HRPP+ A Y ENRK ++VC  Q+HTRS+F APQ+A SIL+G A L + ++ E Y IT+P  NAHNLL GT+R E GG +++ C +T  KAE  +HQ
Sbjct:  147 ESFAATWEHDDGSRSQYVGEQVLHRPPVTAFYFENRKNNIVCTGQVHTRSKFAAPQSAMSILEGGATLTLTDKDESYWITYPDANAHNLLMGTLRMEYGGASVIYCAKTKCKAEFTWHQ 265          
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: A0A7S1CPG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPG8_9STRA)

HSP 1 Score: 143 bits (360), Expect = 5.050e-38
Identity = 64/124 (51.61%), Postives = 89/124 (71.77%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDFHQVGMFT 372
            ETFAC W H+DGS++QY  EQVSHRPP+ A+++ENR+ ++  N Q+ T+SRF+APQTA SI+ G   L   +R E Y IT P++ AH LL GT+R E+GG A +VC +TG +A++ F Q  M +
Sbjct:  137 ETFACAWTHEDGSRSQYFAEQVSHRPPVSAMFMENRRHNITANAQVWTQSRFKAPQTAVSIMAGGVRLRFTDRDEEYFITLPSFFAHGLLLGTLRMEIGGDATIVCEKTGHRADIKFKQKPMMS 260          
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: A0A5A8ECR4_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8ECR4_CAFRO)

HSP 1 Score: 132 bits (331), Expect = 1.100e-33
Identity = 62/123 (50.41%), Postives = 78/123 (63.41%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDFHQVGMF 369
            ET   +W H+DGS++ YL EQV HRPPI A+++ N    +  N  IHTRS+F APQTAQSIL+G   L   N  E Y +TFPT NA  LLFGT+R E+ G   + C +TGL  E+ FH    F
Sbjct:  146 ETMGTFWVHEDGSRSTYLAEQVCHRPPISAMHVRNVTHGIEANAAIHTRSKFSAPQTAQSILEGGCSLQFHNHGEEYFVTFPTANALGLLFGTLRMELSGDVRIACAKTGLAVELSFHIAPFF 268          
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: A0A5J4WU19_9EUKA (Putative Oxysterol-binding protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WU19_9EUKA)

HSP 1 Score: 111 bits (278), Expect = 4.340e-26
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDFHQVGM 366
            E F C+W H+DG+KT YL EQVSH PPI AL  EN+++     C ++T+++F    +   IL+G A L ++NRKE Y    P+     +L G +  EV G   ++C +TGL++ MDF   GM
Sbjct:  119 EIFRCFWVHEDGTKTWYLAEQVSHHPPITALRFENKEKGWTIACSLYTKTKFLG-NSVVCILEGQAHLKLINRKETYVFCMPSVYCRGILIGRLAVEVSGDTKIICKKTGLQSFMDFKSKGM 239          
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: A0A7R8YVX6_HERIL (Oxysterol-binding protein n=6 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8YVX6_HERIL)

HSP 1 Score: 111 bits (278), Expect = 4.490e-26
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDF 351
            ETF CYW+H +GS+T Y+ EQVSH PPI A Y+ NR+     +C I  +S+F    T+ +ILDG A L +L R E Y +T P  +   +L GT+  E+GG+  + C  TG KA+++F
Sbjct:  583 ETFRCYWEHPNGSRTFYIAEQVSHHPPISAFYVTNRQDGFCISCSILAKSKFYGNSTS-AILDGVATLTLLPRGENYTLTVPYAHCKGILMGTLSMELGGKVSIECENTGYKADIEF 698          
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: A0A5J4W0B8_9EUKA (Putative Oxysterol-binding protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4W0B8_9EUKA)

HSP 1 Score: 111 bits (277), Expect = 4.530e-26
Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDF 351
            E F CYW H D SKT ++GEQVSH PPI A Y EN          I  +S F    +A +I+ G   L++L+RKE+Y IT+PTY A  ++ GT+R E  G+  ++C ETGL+A+++F
Sbjct:  110 EIFRCYWQHPDNSKTWFIGEQVSHHPPISAFYFENTDWQYAIEGSIEIKSNFTG-LSAGTIMHGTIRLYLLDRKEVYLITYPTYYARGVVIGTLRLETVGETSILCYETGLQAKVNF 225          
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: A0A336MF29_CULSO (Oxysterol-binding protein n=4 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336MF29_CULSO)

HSP 1 Score: 111 bits (277), Expect = 6.120e-26
Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDF 351
            ETF CYW+H +GS+T Y+ EQVSH PP+ A Y+ NR+     +C I  +S+F    T+ +ILDG A L +L R E Y +T P  +   +L GT+  E+GG+  + C  TG K E++F
Sbjct:  582 ETFRCYWEHPNGSRTFYIAEQVSHHPPVSAFYVTNRQDGFCISCSILAKSKFYGNSTS-AILDGTATLTLLPRGESYTLTIPYAHCKGILMGTLSMELGGKITIDCENTGYKTELEF 697          
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: A0A182QS21_9DIPT (PH domain-containing protein n=4 Tax=Cellia TaxID=44534 RepID=A0A182QS21_9DIPT)

HSP 1 Score: 110 bits (276), Expect = 8.360e-26
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDF 351
            ETF CYW HD+GS+T Y+ EQVSH PP+   Y+ NR+     +C I  +S+F    T+ +IL+G A L +L R E Y +T P  +   +L GT+  E+GG+  V C  TG K E++F
Sbjct:  568 ETFRCYWQHDNGSRTFYIAEQVSHHPPVSVFYVTNRQDGFSISCSILAKSKFYGNSTS-AILEGVATLTLLPRGESYTLTVPYAHCKGILMGTLSMELGGKVTVECENTGYKTELEF 683          
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: T1PLE4_MUSDO (Oxysterol-binding protein n=2 Tax=Musca domestica TaxID=7370 RepID=T1PLE4_MUSDO)

HSP 1 Score: 110 bits (275), Expect = 1.120e-25
Identity = 49/117 (41.88%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDF 351
            ET+ CYW+H++GS+T Y+ EQVSH PPI A Y+ NR+     +C I  +S+F    T+ ++L+G A L +L R E Y +T P  +   +L GT+  E+GG+  + C  TG K E++F
Sbjct:  397 ETYRCYWEHENGSRTYYIAEQVSHHPPISAFYVTNRQEGFCISCSILAKSKFYGNSTS-AVLEGVATLTLLPRGESYTLTTPYAHCKGILMGTLSMELGGKINIECENTGYKTELEF 512          
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Match: A0A1I8N1H1_MUSDO (Oxysterol-binding protein n=12 Tax=Muscinae TaxID=43910 RepID=A0A1I8N1H1_MUSDO)

HSP 1 Score: 110 bits (275), Expect = 1.130e-25
Identity = 49/117 (41.88%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    1 ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRSRFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGGQALVVCNETGLKAEMDF 351
            ET+ CYW+H++GS+T Y+ EQVSH PPI A Y+ NR+     +C I  +S+F    T+ ++L+G A L +L R E Y +T P  +   +L GT+  E+GG+  + C  TG K E++F
Sbjct:  504 ETYRCYWEHENGSRTYYIAEQVSHHPPISAFYVTNRQEGFCISCSILAKSKFYGNSTS-AVLEGVATLTLLPRGESYTLTTPYAHCKGILMGTLSMELGGKINIECENTGYKTELEF 619          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101348.283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812TWD4_9DINO5.770e-4156.30OSBPL5 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A7S1CPG8_9STRA5.050e-3851.61Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A5A8ECR4_CAFRO1.100e-3350.41Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A5J4WU19_9EUKA4.340e-2641.80Putative Oxysterol-binding protein n=1 Tax=Streblo... [more]
A0A7R8YVX6_HERIL4.490e-2644.44Oxysterol-binding protein n=6 Tax=Hermetia illucen... [more]
A0A5J4W0B8_9EUKA4.530e-2645.30Putative Oxysterol-binding protein n=1 Tax=Streblo... [more]
A0A336MF29_CULSO6.120e-2643.59Oxysterol-binding protein n=4 Tax=Culicoides sonor... [more]
A0A182QS21_9DIPT8.360e-2643.59PH domain-containing protein n=4 Tax=Cellia TaxID=... [more]
T1PLE4_MUSDO1.120e-2541.88Oxysterol-binding protein n=2 Tax=Musca domestica ... [more]
A0A1I8N1H1_MUSDO1.130e-2541.88Oxysterol-binding protein n=12 Tax=Muscinae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101348contigM-pyrifera_M_contig101348:4..669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score114.0
Seed ortholog evalue5e-23
Seed eggNOG ortholog192875.XP_004346330.1
KEGG koko:K22285
KEGG TC2.D.1.1
Hectar predicted targeting categoryother localisation
GOsGO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0023052,GO:0040008,GO:0040014,GO:0042221,GO:0048638,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051716,GO:0065007,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560
EggNOG free text desc.sterol binding
EggNOG OGs38CEM@33154,KOG2210@1,KOG2210@2759
COG Functional cat.T
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04131
Exons2
Model size372
Cds size372
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815511.274061-CDS-M-pyrifera_M_contig101348:3..1471622815511.274061-CDS-M-pyrifera_M_contig101348:3..147Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101348 4..147 -
1692277444.389485-CDS-M-pyrifera_M_contig101348:3..1471692277444.389485-CDS-M-pyrifera_M_contig101348:3..147Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101348 4..147 -
1622815511.2869968-CDS-M-pyrifera_M_contig101348:441..6691622815511.2869968-CDS-M-pyrifera_M_contig101348:441..669Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101348 442..669 -
1692277444.405195-CDS-M-pyrifera_M_contig101348:441..6691692277444.405195-CDS-M-pyrifera_M_contig101348:441..669Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101348 442..669 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101348.283.1prot_M-pyrifera_M_contig101348.283.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101348 4..669 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101348.283.1

>prot_M-pyrifera_M_contig101348.283.1 ID=prot_M-pyrifera_M_contig101348.283.1|Name=mRNA_M-pyrifera_M_contig101348.283.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
ETFACYWDHDDGSKTQYLGEQVSHRPPIVALYIENRKRHLVCNCQIHTRS
RFQAPQTAQSILDGYADLHVLNRKEMYRITFPTYNAHNLLFGTMRTEVGG
QALVVCNETGLKAEMDFHQVGMFT
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mRNA from alignment at M-pyrifera_M_contig101348:4..669-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101348.283.1 ID=mRNA_M-pyrifera_M_contig101348.283.1|Name=mRNA_M-pyrifera_M_contig101348.283.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig101348:4..669- (Macrocystis pyrifera P11B4 male)
GAAACCTTCGCTTGCTACTGGGACCACGACGATGGGTCAAAGACCCAGTA TCTGGGAGAACAAGTATCGCACCGCCCTCCCATCGTGGCCCTCTACATTG AGAACCGAAAGCGCCATCTTGTCTGCAACTGCCAAATCCACACACGCTCT CGCTTCCAAGCACCACAAACCGCCCAATCCATCTTGGATGGGTATGCCGA CCTCCATGTGCTCAACAGAAAGGAGATGGTACGTCGTTTGGGTTGGGGGT TTTGTCCTTTTATTTATTTTTCCTCCTTTTTTCATTCCTCTTTTTTCGTT CCTCTTCCAATCCTCTATCTACTCGTCTTTCTTTTCATCCATTCTCTTTT CCATCCTTCCTCTCTTTCTCCATCTCCTCTTCTCCACCCCCACTCCATCT CCTCCCTCCTCCTCACTCCCAATCCTCCACCCATGTCTTTTTTTCCTCCT TTTTCAATCTTTCCTCCTTTTCAATCTTTCCTCCTTTTTCTATTTTTCCT CTTTCCTCTTTCCCTTTTGCAGTACCGTATTACGTTTCCCACGTACAACG CGCACAACCTCTTGTTCGGCACGATGCGCACCGAGGTTGGGGGCCAGGCG TTGGTGGTGTGCAACGAGACTGGTCTCAAGGCGGAGATGGACTTCCACCA GGTTGGCATGTTCACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101348:4..669-

>mRNA_M-pyrifera_M_contig101348.283.1 ID=mRNA_M-pyrifera_M_contig101348.283.1|Name=mRNA_M-pyrifera_M_contig101348.283.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig101348:4..669- (Macrocystis pyrifera P11B4 male)
GAAACCTTCGCTTGCTACTGGGACCACGACGATGGGTCAAAGACCCAGTA
TCTGGGAGAACAAGTATCGCACCGCCCTCCCATCGTGGCCCTCTACATTG
AGAACCGAAAGCGCCATCTTGTCTGCAACTGCCAAATCCACACACGCTCT
CGCTTCCAAGCACCACAAACCGCCCAATCCATCTTGGATGGGTATGCCGA
CCTCCATGTGCTCAACAGAAAGGAGATGGAAACCTTCGCTTGCTACTGGG
ACCACGACGATGGGTCAAAGACCCAGTATCTGGGAGAACAAGTATCGCAC
CGCCCTCCCATCGTGGCCCTCTACATTGAGAACCGAAAGCGCCATCTTGT
CTGCAACTGCCAAATCCACACACGCTCTCGCTTCCAAGCACCACAAACCG
CCCAATCCATCTTGGATGGGTATGCCGACCTCCATGTGCTCAACAGAAAG
GAGATGTACCGTATTACGTTTCCCACGTACAACGCGCACAACCTCTTGTT
CGGCACGATGCGCACCGAGGTTGGGGGCCAGGCGTTGGTGGTGTGCAACG
AGACTGGTCTCAAGGCGGAGATGGACTTCCACCAGGTTGGCATGTTCACC
TACCGTATTACGTTTCCCACGTACAACGCGCACAACCTCTTGTTCGGCAC
GATGCGCACCGAGGTTGGGGGCCAGGCGTTGGTGGTGTGCAACGAGACTG
GTCTCAAGGCGGAGATGGACTTCCACCAGGTTGGCATGTTCACC
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