prot_M-pyrifera_M_contig113546.2825.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig113546.2825.1
Unique Name	prot_M-pyrifera_M_contig113546.2825.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	38

Homology

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BLAST of mRNA_M-pyrifera_M_contig113546.2825.1 vs. uniprot
Match: A0A7V8V1G8_9BACT (Uncharacterized protein n=2 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V1G8_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 4.580e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0

Query:    1 LQLSTAAILILSAVTMQADAPSRAEIDARFQTQLNALA 38
            LQLSTAAILILSAVTMQADAPSRAEIDARFQTQLNALA
Sbjct:   71 LQLSTAAILILSAVTMQADAPSRAEIDARFQTQLNALA 108

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BLAST of mRNA_M-pyrifera_M_contig113546.2825.1 vs. uniprot
Match: A0A518C2C6_9BACT (Leucine Rich repeats (2 copies) n=2 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518C2C6_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 4.430e-9
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0

Query:    1 LQLSTAAILILSAVTMQADAPSRAEIDARFQTQLNALA 38
            LQL+TAAILILSAVTMQA+APSRAEIDARFQ QL+ LA
Sbjct:   60 LQLTTAAILILSAVTMQAEAPSRAEIDARFQAQLSELA 97

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BLAST of mRNA_M-pyrifera_M_contig113546.2825.1 vs. uniprot
Match: A0A2S8FXE8_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FXE8_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 6.060e-9
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0

Query:    1 LQLSTAAILILSAVTMQADAPSRAEIDARFQTQLNALA 38
            +QL+TAAILILSAVTMQA+APSR E DARFQTQLN LA
Sbjct:    1 MQLTTAAILILSAVTMQAEAPSRVETDARFQTQLNELA 38

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BLAST of mRNA_M-pyrifera_M_contig113546.2825.1 vs. uniprot
Match: UPI001CC9C52A (hypothetical protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CC9C52A)

HSP 1 Score: 57.8 bits (138), Expect = 1.130e-8
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0

Query:    1 LQLSTAAILILSAVTMQADAPSRAEIDARFQTQLNALA 38
            +QLSTAAILI+SAVTMQ +APSR EIDARFQ+QLN LA
Sbjct:    1 MQLSTAAILIISAVTMQTEAPSRVEIDARFQSQLNELA 38

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig113546.2825.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig113546.2825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A7V8V1G8_9BACT	4.580e-12	100.00	Uncharacterized protein n=2 Tax=Bremerella alba Ta...	[more]
A0A518C2C6_9BACT	4.430e-9	86.84	Leucine Rich repeats (2 copies) n=2 Tax=Bremerella...	[more]
A0A2S8FXE8_9BACT	6.060e-9	84.21	Uncharacterized protein n=1 Tax=Blastopirellula ma...	[more]
UPI001CC9C52A	1.130e-8	81.58	hypothetical protein n=1 Tax=Bremerella volcania T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..38
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..24
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.557

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig113546	contig	M-pyrifera_M_contig113546:3..116 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig113546.2825.1	mRNA_M-pyrifera_M_contig113546.2825.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig113546 3..116 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig113546.2825.1 ID=prot_M-pyrifera_M_contig113546.2825.1|Name=mRNA_M-pyrifera_M_contig113546.2825.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
LQLSTAAILILSAVTMQADAPSRAEIDARFQTQLNALA