prot_M-pyrifera_M_contig113528.2821.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113528.2821.1
Unique Nameprot_M-pyrifera_M_contig113528.2821.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length88
Homology
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: UPI0019559F44 (signal recognition particle subunit SRP68-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019559F44)

HSP 1 Score: 67.4 bits (163), Expect = 1.100e-11
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGD+ RY GYCSRRLRRLR  K +G   GN           F+ ++V  E + + RHLL+ L   ERAW+    LK +A
Sbjct:   40 QQHGLRHGDYQRYRGYCSRRLRRLR--KTLGFKMGN--------RHKFTGKKVTVEMLSDNRHLLLVLMEAERAWSYAMQLKQEA 114          
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: A0A3B3RXY2_9TELE (Signal recognition particle subunit SRP68 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RXY2_9TELE)

HSP 1 Score: 68.2 bits (165), Expect = 2.010e-11
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGD+ RY GYCSRRLRRLR  K +G   GN           F+ ++V ++ + + R+LL+ L   ERAW+    LK++A
Sbjct:   69 QQHGLRHGDYQRYRGYCSRRLRRLR--KTLGFKMGN--------RHKFTGKKVTEDMLTDNRYLLLVLMEAERAWSYSMQLKMEA 143          
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: UPI001CFBB7EF (signal recognition particle subunit SRP68 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBB7EF)

HSP 1 Score: 67.8 bits (164), Expect = 2.750e-11
Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGDF RY GYCSRRLRRLR  K +G   GN           F+ ++V+ E + + R+LL+ L   ERAW+    LK +A
Sbjct:   65 QQHGLRHGDFQRYRGYCSRRLRRLR--KTLGFKMGN--------RHKFTGKKVSAEMLTDNRYLLLVLMNAERAWSYAMQLKQEA 139          
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: UPI002013DE58 (signal recognition particle subunit SRP68-like isoform X2 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013DE58)

HSP 1 Score: 67.4 bits (163), Expect = 3.670e-11
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGD+ RY GYCSRRLRRLR  K +G   GN           F+ ++V  E + + RHLL+ L   ERAW+    LK +A
Sbjct:   23 QQHGLRHGDYQRYRGYCSRRLRRLR--KTLGFKMGN--------RHKFTGKKVTVEMLSDNRHLLLVLMEAERAWSYAMQLKQEA 97          
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: UPI00071E495B (signal recognition particle subunit SRP68-like n=1 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071E495B)

HSP 1 Score: 65.1 bits (157), Expect = 5.040e-11
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGDF RY GYCSRRLRRLR  K +    GN           F+ ++V +E + + R+LL+ L   ERAW+    LK +A
Sbjct:   60 QQHGLRHGDFQRYRGYCSRRLRRLR--KTLNFKMGN--------RHKFTGKKVTEEILSDNRYLLLILMDAERAWSYAMQLKQEA 134          
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: A0A673JTM4_9TELE (Signal recognition particle subunit SRP68 n=10 Tax=Cyprinidae TaxID=7953 RepID=A0A673JTM4_9TELE)

HSP 1 Score: 67.0 bits (162), Expect = 5.110e-11
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGD+ RY GYCSRRLRRLR  K +G   GN           F+ ++V  E + + RHLL+ L   ERAW+    LK +A
Sbjct:   49 QQHGLRHGDYQRYRGYCSRRLRRLR--KTLGFKMGN--------RHKFTGKKVTVELLSDNRHLLLVLMEAERAWSYAMQLKQEA 123          
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: A0A672LEH9_SINGR (Signal recognition particle subunit SRP68 n=9 Tax=Cyprinoidei TaxID=30727 RepID=A0A672LEH9_SINGR)

HSP 1 Score: 67.0 bits (162), Expect = 5.110e-11
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGD+ RY GYCSRRLRRLR  K +G   GN           F+ ++V  E + + RHLL+ L   ERAW+    LK +A
Sbjct:   41 QQHGLRHGDYQRYRGYCSRRLRRLR--KTLGFKMGN--------RHKFTGKKVTVELLSDNRHLLLVLMEAERAWSYAMQLKQEA 115          
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: A0A6P8F9T6_CLUHA (Signal recognition particle subunit SRP68 n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P8F9T6_CLUHA)

HSP 1 Score: 67.0 bits (162), Expect = 5.120e-11
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGD+ RY GYCSRRLRRLR+  G  +          GH   F+ ++V  E V + R+LL+ L   ERAW+    LK +A
Sbjct:   34 QQHGLRHGDYQRYRGYCSRRLRRLRKTLGFKV----------GHRHKFTGKKVTVEMVSDNRYLLLVLMESERAWSYAMQLKQEA 108          
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: A0A6P6KF73_CARAU (Signal recognition particle subunit SRP68 n=14 Tax=Cyprinoidei TaxID=30727 RepID=A0A6P6KF73_CARAU)

HSP 1 Score: 67.0 bits (162), Expect = 5.120e-11
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGD+ RY GYCSRRLRRLR  K +G   GN           F+ ++V  E + + RHLL+ L   ERAW+    LK +A
Sbjct:   39 QQHGLRHGDYQRYRGYCSRRLRRLR--KTLGFKMGN--------RHKFTGKKVTVELLSDNRHLLLVLMEAERAWSYAMQLKQEA 113          
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Match: Q6DH97_DANRE (Signal recognition particle subunit SRP68 n=1 Tax=Danio rerio TaxID=7955 RepID=Q6DH97_DANRE)

HSP 1 Score: 65.9 bits (159), Expect = 9.360e-11
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    2 QQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFSFRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQA 86
            QQ+GLRHGD+ RY GYCSRRLRRLR  K +G   GN           F+ ++V  E + + R+LL+ L   ERAW+    LK +A
Sbjct:   29 QQHGLRHGDYQRYRGYCSRRLRRLR--KALGFKMGN--------RHKFTGKKVTVEMLSDNRYLLLVLMEAERAWSYAMQLKQEA 103          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113528.2821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019559F441.100e-1147.06signal recognition particle subunit SRP68-like n=1... [more]
A0A3B3RXY2_9TELE2.010e-1144.71Signal recognition particle subunit SRP68 n=2 Tax=... [more]
UPI001CFBB7EF2.750e-1147.06signal recognition particle subunit SRP68 n=1 Tax=... [more]
UPI002013DE583.670e-1147.06signal recognition particle subunit SRP68-like iso... [more]
UPI00071E495B5.040e-1145.88signal recognition particle subunit SRP68-like n=1... [more]
A0A673JTM4_9TELE5.110e-1147.06Signal recognition particle subunit SRP68 n=10 Tax... [more]
A0A672LEH9_SINGR5.110e-1147.06Signal recognition particle subunit SRP68 n=9 Tax=... [more]
A0A6P8F9T6_CLUHA5.120e-1145.88Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A6P6KF73_CARAU5.120e-1147.06Signal recognition particle subunit SRP68 n=14 Tax... [more]
Q6DH97_DANRE9.360e-1145.88Signal recognition particle subunit SRP68 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038253SRP68, N-terminal domain superfamilyGENE3D1.10.3450.40coord: 1..88
e-value: 3.7E-20
score: 74.8
IPR026258Signal recognition particle subunit SRP68PFAMPF16969SRP68coord: 6..86
e-value: 2.0E-15
score: 56.9
IPR026258Signal recognition particle subunit SRP68PANTHERPTHR12860SIGNAL RECOGNITION PARTICLE 68 KDA PROTEINcoord: 1..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113528contigM-pyrifera_M_contig113528:249..512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113528.2821.1mRNA_M-pyrifera_M_contig113528.2821.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113528 249..512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113528.2821.1 ID=prot_M-pyrifera_M_contig113528.2821.1|Name=mRNA_M-pyrifera_M_contig113528.2821.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp
RQQNGLRHGDFGRYHGYCSRRLRRLRRGKGVGLTFGNGKPSRKGHAQAFS
FRRVADEEVVEERHLLVGLFFVERAWAQFEDLKLQAAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038253SRP68_N_sf
IPR026258SRP68