mRNA_M-pyrifera_M_contig101343.282.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101343.282.1
Unique NamemRNA_M-pyrifera_M_contig101343.282.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: A0A2E7K5X3_9PLAN (Methyltransf_25 domain-containing protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K5X3_9PLAN)

HSP 1 Score: 439 bits (1128), Expect = 8.570e-155
Identity = 219/223 (98.21%), Postives = 222/223 (99.55%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLIGNLYSTSFASPAVLGEKRSAFEA 669
            GTVPYYVRYRVPYPEELL RIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGL+ARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEEL+TRITQQWTLETLIGNLYSTSFASPAVLGEK+SAFEA
Sbjct:   22 GTVPYYVRYRVPYPEELLARIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLMARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELKTRITQQWTLETLIGNLYSTSFASPAVLGEKQSAFEA 244          
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: A0A5A8BH89_9PLAN (Class I SAM-dependent methyltransferase n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8BH89_9PLAN)

HSP 1 Score: 349 bits (896), Expect = 2.110e-119
Identity = 176/223 (78.92%), Postives = 192/223 (86.10%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLIGNLYSTSFASPAVLGEKRSAFEA 669
            GTVPYYVRYRVPYPEELLTRIRDRAA SG G LLDLGSGTGEIALRLAPHFR VTAVEPD AMR+AG+ KM++QQI NV W  + AE F+A + TFELV+IGAAFHWMDR  LARRIR WL P QPLVILGYTSIWSGT +WLRLVREVLQRCLG KRRAGSGN+PEL+QPHEQVL EA +Q EE++ +  Q+WTL  LIGNL STSFASPAVLGEKR AFEA
Sbjct:   22 GTVPYYVRYRVPYPEELLTRIRDRAAISGDGCLLDLGSGTGEIALRLAPHFRAVTAVEPDEAMRTAGIQKMQDQQIRNVEWLPQMAEEFTAGDDTFELVSIGAAFHWMDRPRLARRIREWLVPGQPLVILGYTSIWSGTAEWLRLVREVLQRCLGEKRRAGSGNYPELAQPHEQVLLEADFQFEEIKYQHAQEWTLADLIGNLNSTSFASPAVLGEKRQAFEA 244          
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: A0A518ABC5_9PLAN (Ubiquinone/menaquinone biosynthesis methyltransferase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ABC5_9PLAN)

HSP 1 Score: 329 bits (844), Expect = 9.250e-112
Identity = 164/223 (73.54%), Postives = 190/223 (85.20%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLIGNLYSTSFASPAVLGEKRSAFEA 669
            GTVPYY+RYRVPYPE LL +IR+ AA SG+G+LLDLGSGTGEIALRLAP FREV A+EPD  MRS+G+ KM++Q+I NV W S+TAE FSA+  TFELV+IGAAFHWM+R +LA+RIR WL P QPLVILGYTSIWSGT DWL LVR VL + LG KRRAGSGN+PELSQPHEQVL EA Y+ EE++ + +Q W L+ LIGNLYSTSFASPAVLGEKR+AFEA
Sbjct:    8 GTVPYYMRYRVPYPEALLKQIREEAAISGAGQLLDLGSGTGEIALRLAPEFREVIAIEPDENMRSSGIQKMQDQKILNVEWLSQTAEEFSAEANTFELVSIGAAFHWMNRPVLAQRIRDWLLPGQPLVILGYTSIWSGTADWLPLVRGVLHKWLGEKRRAGSGNYPELSQPHEQVLLEADYEFEEIKYQHSQHWKLDDLIGNLYSTSFASPAVLGEKRNAFEA 230          
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: UPI0018D72412 (class I SAM-dependent methyltransferase n=1 Tax=Gimesia maris TaxID=122 RepID=UPI0018D72412)

HSP 1 Score: 295 bits (755), Expect = 3.060e-98
Identity = 142/223 (63.68%), Postives = 180/223 (80.72%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLIGNLYSTSFASPAVLGEKRSAFEA 669
            GTVPYY RYRVPYP+ LL++I ++A  +GSGRLLDLG GTGE+A+RL+P F+EVTAV+PD  M +A   K R+QQ+ N+ W  ++AE FSA+  +FELVTIGAAFHWMDR ++A RI+ WL+P+QPLVI+GYTSIWSG  DW  LVR+V++R LG KRRAG+G F  L+ PHE VL +AGYQ+EE++    Q WTL+ L+GNLYSTSFASPAVLGEK++ FEA
Sbjct:    8 GTVPYYARYRVPYPQALLSQICEQAQLTGSGRLLDLGCGTGELAVRLSPRFQEVTAVDPDAEMLAAAQQKARDQQVTNIQWLHQSAERFSAEPDSFELVTIGAAFHWMDRPVMAPRIQSWLQPQQPLVIMGYTSIWSGNADWHPLVRDVVKRWLGEKRRAGTGEFNNLAAPHELVLIDAGYQLEEIKYEHPQTWTLDDLLGNLYSTSFASPAVLGEKQADFEA 230          
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: A0A518IHM6_9PLAN (Putative methyltransferase YcgJ n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IHM6_9PLAN)

HSP 1 Score: 292 bits (747), Expect = 5.200e-97
Identity = 142/223 (63.68%), Postives = 176/223 (78.92%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLIGNLYSTSFASPAVLGEKRSAFEA 669
            GTVPYY RYRVPYPE LL +IR ++A SG G LLDLG GTGEIALR+AP FR+VTAV+ DP M +A   K +++ I+ + W +++AE FSAD  +FELVTIGAAFHWMDR  +A R+R WL+P +PLV+LGYTSIWSGT DWL LV+ V+++ LG KRRAGSG FP+   PHE VL ++GY ++E E +    WTL+ LIGNLYSTSFASPAVLG+K+SAFEA
Sbjct:    8 GTVPYYSRYRVPYPEPLLAKIRTKSALSGQGSLLDLGCGTGEIALRMAPFFRDVTAVDIDPEMLAAAEQKAQKRGIETIQWLNQSAEQFSADTDSFELVTIGAAFHWMDRRTIAERVREWLQPGKPLVVLGYTSIWSGTADWLPLVQTVIKKWLGEKRRAGSGEFPDAIDPHELVLTKSGYTLDEFEYQHPHTWTLDELIGNLYSTSFASPAVLGDKQSAFEA 230          
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: A0A2E2BYJ9_9PLAN (SAM-dependent methyltransferase n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BYJ9_9PLAN)

HSP 1 Score: 290 bits (743), Expect = 2.250e-96
Identity = 141/223 (63.23%), Postives = 175/223 (78.48%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLIGNLYSTSFASPAVLGEKRSAFEA 669
            GTVPYY RYRVPYP+ LL+++ ++A  +G+GRLLDLG GTGE+A+RLAP F+EV AV+PD  M +    K R+QQ+ N+ WR  +AE  +A+  + ELVTIGAAFHWMDR ++A RI+ WL+P+QPLVILGYTSIWSG   W  LVR VL+R LG KRRAGSG F EL+ PHE VL +AGYQ+EE+    +Q WTL+ L+GNLYSTSFASPAVLGEKR+ FEA
Sbjct:    8 GTVPYYARYRVPYPQPLLSQVCEQAQLTGTGRLLDLGCGTGELAIRLAPRFQEVIAVDPDAEMLATAKQKARDQQVPNIQWRHHSAEQLTAEPGSCELVTIGAAFHWMDRPVMASRIKTWLQPQQPLVILGYTSIWSGNAAWHPLVRNVLKRWLGEKRRAGSGEFNELAAPHELVLLDAGYQLEEIRYEYSQAWTLDDLLGNLYSTSFASPAVLGEKRADFEA 230          
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: A0A517XGM2_9PLAN (Putative methyltransferase YcgJ n=2 Tax=Gimesia maris TaxID=122 RepID=A0A517XGM2_9PLAN)

HSP 1 Score: 288 bits (738), Expect = 1.250e-95
Identity = 140/223 (62.78%), Postives = 175/223 (78.48%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLIGNLYSTSFASPAVLGEKRSAFEA 669
            GTVPYY RYRVPYP+ LL ++ ++A  +GSGRLLDLG GTGE+A+RLA  F EV AV+PD  M +A   K REQQ  N+ WR+++AE FSA+  +FEL+TIGAAFHWMDR ++A RIR WL+P+QPLVI+GYTSIWSG  DW  LVREV++R LG KRRAG+G F  L+ PHE VL +AG+++EE++    Q WTL+ L+GNLYSTSFASPAVL EK+  FEA
Sbjct:    8 GTVPYYARYRVPYPQALLLQVCEQAPLTGSGRLLDLGCGTGELAIRLASRFEEVLAVDPDAEMLAAAQQKAREQQATNIQWRNQSAEQFSAEPDSFELITIGAAFHWMDRPVMAPRIRSWLQPQQPLVIMGYTSIWSGNADWHPLVREVVKRWLGEKRRAGTGEFNNLAAPHELVLLDAGFKLEEIKYEHPQTWTLDDLLGNLYSTSFASPAVLREKQPDFEA 230          
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: A0A517VIY2_9PLAN (Putative methyltransferase YcgJ n=2 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VIY2_9PLAN)

HSP 1 Score: 285 bits (729), Expect = 3.940e-94
Identity = 137/223 (61.43%), Postives = 174/223 (78.03%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLIGNLYSTSFASPAVLGEKRSAFEA 669
            GTVPYY RYRVPYP+ LL+++ ++A  +  GRLLDLG GTGE+A+RLAP F++V AV+PD  M +A   K + Q++ N+ W  ++AE  +A+  +FEL+TIGAAFHWMDR ++A RIR WL+P+QPLVILGYTSIWSG  DW  LVR VL+R LG KRRAGSG F  L+ PHE VL +AGYQ+EE++    Q WTL+ L+GNLYSTSFASPAVLGEK++ FEA
Sbjct:   18 GTVPYYARYRVPYPQALLSQVCEQARLANRGRLLDLGCGTGELAIRLAPRFQDVIAVDPDTEMLAAAQQKAQNQRVTNIQWLHQSAEQLTAEPNSFELITIGAAFHWMDRPIMAPRIRSWLQPQQPLVILGYTSIWSGNADWHPLVRTVLKRWLGEKRRAGSGEFNNLAAPHELVLIDAGYQLEEIKYEHPQTWTLDDLLGNLYSTSFASPAVLGEKQADFEA 240          
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: A0A517RKN5_9PLAN (Putative methyltransferase YcgJ n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RKN5_9PLAN)

HSP 1 Score: 268 bits (686), Expect = 9.580e-88
Identity = 130/223 (58.30%), Postives = 165/223 (73.99%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVLQRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLIGNLYSTSFASPAVLGEKRSAFEA 669
            GTVPYYVRYRVPYP+ LL RI D     G GRLLDLG GTGE+A+RL+P F+E  AV+P+  M +A      E ++ N+ W  + AE FSAD  +F+LVTIGAA+HWMDR ++A R+  WL+P QPLVI GY+SIW GT DW  LV  V+++ LGAKRRAG G + + + PHE VL +AGY ++E+E +    WTL+ LIGNLYSTSFASPAVLG+K++AFEA
Sbjct:    8 GTVPYYVRYRVPYPDPLLNRILDLTVAPGRGRLLDLGCGTGELAVRLSPSFQETIAVDPNQEMLAAAKQLAHELKLPNIQWHHQRAEEFSADAASFDLVTIGAAYHWMDRPIIASRVHEWLKPGQPLVIFGYSSIWRGTMDWQLLVCSVIKKWLGAKRRAGLGEYNDAADPHELVLIQAGYTLDEIEYQHPHTWTLDELIGNLYSTSFASPAVLGDKQTAFEA 230          
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Match: A0A2D5H1J5_9PLAN (SAM-dependent methyltransferase (Fragment) n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2D5H1J5_9PLAN)

HSP 1 Score: 199 bits (505), Expect = 7.970e-62
Identity = 89/142 (62.68%), Postives = 115/142 (80.99%), Query Frame = 1
Query:    1 GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPHFREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVTIGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDW 426
            GTVPYY RYRVPYP+ LL+++ ++A  +GSGRLLDLG GTGE+A+RL+P F++V AV+PD  M +A   K R+QQ+ N+ W  ++AE FSA+  +FELVTIGAAFHWMDR ++A RIR WL+P+QPLVI+GYTSIWSG  DW
Sbjct:    8 GTVPYYARYRVPYPQALLSQVCEQAQLTGSGRLLDLGCGTGELAVRLSPRFQDVIAVDPDAEMLAAAQQKARDQQVTNIQWLHQSAERFSAEPDSFELVTIGAAFHWMDRPVMAPRIRSWLQPQQPLVIMGYTSIWSGNADW 149          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101343.282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7K5X3_9PLAN8.570e-15598.21Methyltransf_25 domain-containing protein n=6 Tax=... [more]
A0A5A8BH89_9PLAN2.110e-11978.92Class I SAM-dependent methyltransferase n=2 Tax=Gi... [more]
A0A518ABC5_9PLAN9.250e-11273.54Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UPI0018D724123.060e-9863.68class I SAM-dependent methyltransferase n=1 Tax=Gi... [more]
A0A518IHM6_9PLAN5.200e-9763.68Putative methyltransferase YcgJ n=1 Tax=Gimesia fu... [more]
A0A2E2BYJ9_9PLAN2.250e-9663.23SAM-dependent methyltransferase n=4 Tax=Planctomyc... [more]
A0A517XGM2_9PLAN1.250e-9562.78Putative methyltransferase YcgJ n=2 Tax=Gimesia ma... [more]
A0A517VIY2_9PLAN3.940e-9461.43Putative methyltransferase YcgJ n=2 Tax=Gimesia al... [more]
A0A517RKN5_9PLAN9.580e-8858.30Putative methyltransferase YcgJ n=2 Tax=Gimesia al... [more]
A0A2D5H1J5_9PLAN7.970e-6262.68SAM-dependent methyltransferase (Fragment) n=2 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101343contigM-pyrifera_M_contig101343:2..670 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score292.0
Seed ortholog evalue2.4e-76
Seed eggNOG ortholog344747.PM8797T_20633
Hectar predicted targeting categoryother localisation
EggNOG free text desc.methyltransferase activity
EggNOG OGsCOG0500@1,COG0500@2
COG Functional cat.Q
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size669
Cds size669
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815511.2372503-CDS-M-pyrifera_M_contig101343:1..6701622815511.2372503-CDS-M-pyrifera_M_contig101343:1..670Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101343 2..670 -
1692277444.3771212-CDS-M-pyrifera_M_contig101343:1..6701692277444.3771212-CDS-M-pyrifera_M_contig101343:1..670Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101343 2..670 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101343.282.1prot_M-pyrifera_M_contig101343.282.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101343 2..670 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101343.282.1

>prot_M-pyrifera_M_contig101343.282.1 ID=prot_M-pyrifera_M_contig101343.282.1|Name=mRNA_M-pyrifera_M_contig101343.282.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp
GTVPYYVRYRVPYPEELLTRIRDRAATSGSGRLLDLGSGTGEIALRLAPH
FREVTAVEPDPAMRSAGLTKMREQQIDNVSWRSETAEAFSADEKTFELVT
IGAAFHWMDRGLLARRIRGWLRPEQPLVILGYTSIWSGTTDWLRLVREVL
QRCLGAKRRAGSGNFPELSQPHEQVLQEAGYQIEELETRITQQWTLETLI
GNLYSTSFASPAVLGEKRSAFEA
back to top

mRNA from alignment at M-pyrifera_M_contig101343:2..670-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101343.282.1 ID=mRNA_M-pyrifera_M_contig101343.282.1|Name=mRNA_M-pyrifera_M_contig101343.282.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=669bp|location=Sequence derived from alignment at M-pyrifera_M_contig101343:2..670- (Macrocystis pyrifera P11B4 male)
GGAACGGTACCTTATTACGTGCGTTATCGCGTGCCCTACCCCGAGGAACT GCTTACCCGGATCCGGGACCGGGCTGCGACTTCGGGATCAGGGCGTCTGC TGGACCTGGGCAGCGGCACCGGTGAGATCGCATTACGGCTGGCGCCTCAC TTTCGCGAAGTGACAGCCGTCGAACCCGATCCTGCGATGCGGTCTGCGGG ACTGACGAAGATGCGGGAACAGCAGATCGATAATGTCAGCTGGCGTTCCG AAACCGCGGAAGCCTTTTCTGCGGACGAGAAAACATTTGAACTGGTGACG ATCGGCGCAGCCTTCCACTGGATGGATCGCGGACTGCTGGCACGACGGAT CCGAGGCTGGCTGCGTCCTGAACAGCCGCTGGTGATCCTGGGGTATACCA GCATCTGGAGCGGGACTACGGACTGGCTCCGACTGGTGCGGGAAGTTCTG CAGCGCTGCCTGGGAGCAAAACGGCGTGCGGGTTCGGGCAACTTCCCCGA ACTGTCCCAGCCTCACGAACAGGTCCTGCAGGAAGCGGGCTACCAGATCG AGGAACTCGAGACCCGGATCACACAACAGTGGACGCTGGAGACACTGATT GGCAATCTCTATTCAACGTCCTTCGCCTCCCCGGCCGTCCTGGGAGAAAA GCGGAGTGCCTTCGAAGCC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig101343:2..670-

>mRNA_M-pyrifera_M_contig101343.282.1 ID=mRNA_M-pyrifera_M_contig101343.282.1|Name=mRNA_M-pyrifera_M_contig101343.282.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig101343:2..670- (Macrocystis pyrifera P11B4 male)
GGAACGGTACCTTATTACGTGCGTTATCGCGTGCCCTACCCCGAGGAACT
GCTTACCCGGATCCGGGACCGGGCTGCGACTTCGGGATCAGGGCGTCTGC
TGGACCTGGGCAGCGGCACCGGTGAGATCGCATTACGGCTGGCGCCTCAC
TTTCGCGAAGTGACAGCCGTCGAACCCGATCCTGCGATGCGGTCTGCGGG
ACTGACGAAGATGCGGGAACAGCAGATCGATAATGTCAGCTGGCGTTCCG
AAACCGCGGAAGCCTTTTCTGCGGACGAGAAAACATTTGAACTGGTGACG
ATCGGCGCAGCCTTCCACTGGATGGATCGCGGACTGCTGGCACGACGGAT
CCGAGGCTGGCTGCGTCCTGAACAGCCGCTGGTGATCCTGGGGTATACCA
GCATCTGGAGCGGGACTACGGACTGGCTCCGACTGGTGCGGGAAGTTCTG
CAGCGCTGCCTGGGAGCAAAACGGCGTGCGGGTTCGGGCAACTTCCCCGA
ACTGTCCCAGCCTCACGAACAGGTCCTGCAGGAAGCGGGCTACCAGATCG
AGGAACTCGAGACCCGGATCACACAACAGTGGACGCTGGAGACACTGATT
GGCAATCTCTATTCAACGTCCTTCGCCTCCCCGGCCGTCCTGGGAGAAAA
GCGGAGTGCCTTCGAAGCCGGAACGGTACCTTATTACGTGCGTTATCGCG
TGCCCTACCCCGAGGAACTGCTTACCCGGATCCGGGACCGGGCTGCGACT
TCGGGATCAGGGCGTCTGCTGGACCTGGGCAGCGGCACCGGTGAGATCGC
ATTACGGCTGGCGCCTCACTTTCGCGAAGTGACAGCCGTCGAACCCGATC
CTGCGATGCGGTCTGCGGGACTGACGAAGATGCGGGAACAGCAGATCGAT
AATGTCAGCTGGCGTTCCGAAACCGCGGAAGCCTTTTCTGCGGACGAGAA
AACATTTGAACTGGTGACGATCGGCGCAGCCTTCCACTGGATGGATCGCG
GACTGCTGGCACGACGGATCCGAGGCTGGCTGCGTCCTGAACAGCCGCTG
GTGATCCTGGGGTATACCAGCATCTGGAGCGGGACTACGGACTGGCTCCG
ACTGGTGCGGGAAGTTCTGCAGCGCTGCCTGGGAGCAAAACGGCGTGCGG
GTTCGGGCAACTTCCCCGAACTGTCCCAGCCTCACGAACAGGTCCTGCAG
GAAGCGGGCTACCAGATCGAGGAACTCGAGACCCGGATCACACAACAGTG
GACGCTGGAGACACTGATTGGCAATCTCTATTCAACGTCCTTCGCCTCCC
CGGCCGTCCTGGGAGAAAAGCGGAGTGCCTTCGAAGCC
back to top