prot_M-pyrifera_M_contig11350.2815.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11350.2815.1
Unique Nameprot_M-pyrifera_M_contig11350.2815.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length69
Homology
BLAST of mRNA_M-pyrifera_M_contig11350.2815.1 vs. uniprot
Match: D7FXM7_ECTSI (Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM7_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 1.080e-28
Identity = 54/68 (79.41%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 LQAISKSANDADALINLICCGRHLGKPASFLDRYIHQLKAAHPQHPYVQSLANAETAFDRVASTFAIA 68
            ++AISKS NDAD L+NLIC  RHL KPASF+DRYI+QLK AHPQHPYVQSLANAE+AFDRVA+TFA+A
Sbjct:  228 VEAISKSQNDADTLVNLICVCRHLDKPASFVDRYINQLKTAHPQHPYVQSLANAESAFDRVAATFALA 295          
BLAST of mRNA_M-pyrifera_M_contig11350.2815.1 vs. uniprot
Match: A0A834IUG7_RHYFE (Coatomer subunit epsilon n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834IUG7_RHYFE)

HSP 1 Score: 63.5 bits (153), Expect = 2.780e-10
Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    2 QAISKSANDADALINLICCGRHLGKPASFLDRYIHQLKAAHPQHPYVQSLANAETAFDRVASTFA 66
            +A++K + +AD LINLI   RHL K   F +RY+ QLK AHP+HP+++ L   E+ F R+   +A
Sbjct:  215 EALTKDSKNADTLINLIALQRHLEKGPEFANRYLSQLKDAHPEHPFIKDLKQKESDFLRIRQQYA 279          
BLAST of mRNA_M-pyrifera_M_contig11350.2815.1 vs. uniprot
Match: U9T177_RHIID (Coatomer subunit epsilon n=8 Tax=Glomeraceae TaxID=36751 RepID=U9T177_RHIID)

HSP 1 Score: 62.8 bits (151), Expect = 6.010e-10
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    1 LQAISKSANDADALINLICCGRHLGKPASFLDRYIHQLKAAHPQHPYVQSLANAETAFDRVASTFAI 67
            L+A++KS +D D L+NLI     L KPA  ++RYI+QLK A P H ++Q L    + FDR A  FA+
Sbjct:  243 LEALNKSNDDPDTLVNLIVVSNLLNKPAEVVNRYINQLKEASPNHAFLQDLDLKSSLFDRAAQRFAL 309          
BLAST of mRNA_M-pyrifera_M_contig11350.2815.1 vs. uniprot
Match: U4TY18_DENPD (Coatomer subunit epsilon n=3 Tax=Dendroctonus ponderosae TaxID=77166 RepID=U4TY18_DENPD)

HSP 1 Score: 60.1 bits (144), Expect = 5.500e-9
Identity = 24/64 (37.50%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    2 QAISKSANDADALINLICCGRHLGKPASFLDRYIHQLKAAHPQHPYVQSLANAETAFDRVASTF 65
            +A+ K +N+A+ LIN+I   +HL K     +RY+ QL+ AHP+HP+++ L   ET F+++   +
Sbjct:  231 EALDKDSNNAEILINMIALQKHLDKGPEMSNRYLSQLRDAHPEHPFIRDLKQKETDFEKICQQY 294          
BLAST of mRNA_M-pyrifera_M_contig11350.2815.1 vs. uniprot
Match: A0A6J2YBR4_SITOR (Coatomer subunit epsilon n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YBR4_SITOR)

HSP 1 Score: 60.1 bits (144), Expect = 5.520e-9
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    2 QAISKSANDADALINLICCGRHLGKPASFLDRYIHQLKAAHPQHPYVQSLANAETAFDRVASTF 65
            +A++K + +AD LINLI   RHL K   F +RY+ QLK AHP+H +++ L   E+ F R+   +
Sbjct:  231 EALTKDSKNADTLINLITLQRHLEKGPEFANRYLSQLKDAHPEHAFIKDLKQKESDFARICQQY 294          
BLAST of mRNA_M-pyrifera_M_contig11350.2815.1 vs. uniprot
Match: A0A7R9UFD7_9STRA (Coatomer subunit epsilon n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFD7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.680e-8
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0
Query:    2 QAISKSANDADALINLICCGRHLGKPASFLDRYIHQLKAAHPQHPYVQSLANAETAFDRVASTFAI 67
            +A+ K  N+ + LIN+I     LGKP     RY+ QL+A  P HP+V+ L   E AFDRV++  ++
Sbjct:  231 EALEKGPNNPETLINMIAACYQLGKPRDATQRYVSQLRANAPDHPFVKRLDTLEQAFDRVSAQLSV 296          
BLAST of mRNA_M-pyrifera_M_contig11350.2815.1 vs. uniprot
Match: A7SPR7_NEMVE (Coatomer subunit epsilon n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SPR7_NEMVE)

HSP 1 Score: 52.4 bits (124), Expect = 3.180e-6
Identity = 22/65 (33.85%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    2 QAISKSANDADALINLICCGRHLGKPASFLDRYIHQLKAAHPQHPYVQSLANAETAFDRVASTFA 66
            +A+ K +N+A+ L+NL+   ++  K     +RY+ QLK AHP H + +     E  F+R++S +A
Sbjct:  230 EALEKDSNNAETLVNLVVLSQYTAKAPEVSNRYLSQLKDAHPHHAFTKDYIAKENEFNRISSQYA 294          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11350.2815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FXM7_ECTSI1.080e-2879.41Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=... [more]
A0A834IUG7_RHYFE2.780e-1044.62Coatomer subunit epsilon n=1 Tax=Rhynchophorus fer... [more]
U9T177_RHIID6.010e-1046.27Coatomer subunit epsilon n=8 Tax=Glomeraceae TaxID... [more]
U4TY18_DENPD5.500e-937.50Coatomer subunit epsilon n=3 Tax=Dendroctonus pond... [more]
A0A6J2YBR4_SITOR5.520e-942.19Coatomer subunit epsilon n=1 Tax=Sitophilus oryzae... [more]
A0A7R9UFD7_9STRA3.680e-840.91Coatomer subunit epsilon n=1 Tax=Pinguiococcus pyr... [more]
A7SPR7_NEMVE3.180e-633.85Coatomer subunit epsilon n=1 Tax=Nematostella vect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..68
e-value: 7.4E-20
score: 73.9
NoneNo IPR availablePFAMPF04733Coatomer_Ecoord: 2..65
e-value: 9.6E-17
score: 61.3
IPR006822Coatomer, epsilon subunitPANTHERPTHR10805COATOMER SUBUNIT EPSILONcoord: 2..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11350contigM-pyrifera_M_contig11350:8529..8735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11350.2815.1mRNA_M-pyrifera_M_contig11350.2815.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11350 8529..8735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11350.2815.1 ID=prot_M-pyrifera_M_contig11350.2815.1|Name=mRNA_M-pyrifera_M_contig11350.2815.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=69bp
LQAISKSANDADALINLICCGRHLGKPASFLDRYIHQLKAAHPQHPYVQS
LANAETAFDRVASTFAIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR006822Coatomer_esu