prot_M-pyrifera_M_contig113487.2811.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113487.2811.1
Unique Nameprot_M-pyrifera_M_contig113487.2811.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length169
Homology
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: A0A4W5PLN6_9TELE (Uncharacterized protein n=2 Tax=Salmoninae TaxID=504568 RepID=A0A4W5PLN6_9TELE)

HSP 1 Score: 219 bits (559), Expect = 2.210e-70
Identity = 104/155 (67.10%), Postives = 127/155 (81.94%), Query Frame = 0
Query:   15 VGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            VGKTSL+NQYV++R+SNQY+A+IGADFLTKEVM+DD+LVT+QIWDTAGQERF+SLGVAFYRG+  CVL YDV    TF+ LDSW++EF+I   P + D+FPFVV+GNK+D   R    K A+AWC S NN  I +FETSAKEA+N+DQAF T AR
Sbjct:   19 VGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPFVVLGNKIDLENRQVTTKRAQAWCASKNN--IPYFETSAKEAINVDQAFQTIAR 171          
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: RAB7A_DICDI (Ras-related protein Rab-7a n=6 Tax=Dictyostelia TaxID=33083 RepID=RAB7A_DICDI)

HSP 1 Score: 219 bits (559), Expect = 3.730e-70
Identity = 102/156 (65.38%), Postives = 132/156 (84.62%), Query Frame = 0
Query:   15 VGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVD-QPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            VGKTSL+NQYV++++SNQY+A+IGADFLTKE+M+DD++VT+QIWDTAGQERF+SLGVAFYRG+  CVLCYDV  A+TFE+LDSW++EF+I  GP + D+FPFVV+GNK+D +  R    K A +WC+S  N  I +FETSAKEA+N++QAF T AR
Sbjct:   19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLENQRVVSQKRAASWCQSKGN--IPYFETSAKEAINVEQAFQTIAR 172          
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: B5X431_SALSA (Ras-related protein Rab-7a n=6 Tax=Salmoninae TaxID=504568 RepID=B5X431_SALSA)

HSP 1 Score: 219 bits (559), Expect = 3.980e-70
Identity = 104/155 (67.10%), Postives = 127/155 (81.94%), Query Frame = 0
Query:   15 VGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            VGKTSL+NQYV++R+SNQY+A+IGADFLTKEVM+DD+LVT+QIWDTAGQERF+SLGVAFYRG+  CVL YDV    TF+ LDSW++EF+I   P + D+FPFVV+GNK+D   R    K A+AWC S NN  I +FETSAKEA+N+DQAF T AR
Sbjct:   19 VGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPFVVLGNKIDLENRQVTTKRAQAWCASKNN--IPYFETSAKEAINVDQAFQTIAR 171          
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: A0A8C3ZJP7_9TELE (Ras-related protein rab7-like n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZJP7_9TELE)

HSP 1 Score: 219 bits (558), Expect = 5.470e-70
Identity = 103/156 (66.03%), Postives = 129/156 (82.69%), Query Frame = 0
Query:   14 RVGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            RVGKTSL+NQYV++++SNQY+A+IGADFLTKEVM+DD+LVT+QIWDTAGQERF+SLGVAFYRG+  CVL YDV    TF+ LDSW++EF+I   P + ++FPFVV+GNK+D   R    K A+AWC+S NN  I +FETSAKEA+N+DQAF T AR
Sbjct:   17 RVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVTTKRAQAWCQSKNN--IPYFETSAKEAINVDQAFQTIAR 170          
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: A0A834RGU1_SARSC (Ras-related protein Rab-7a n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834RGU1_SARSC)

HSP 1 Score: 218 bits (555), Expect = 1.670e-69
Identity = 100/155 (64.52%), Postives = 130/155 (83.87%), Query Frame = 0
Query:   15 VGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            VGKTSL+NQYV++R+SNQY+A+IGADFLTKEV++DD+LVT+QIWDTAGQERF+SLGVAFYRG+  CVL YDV +  +F+ LDSW++EF+I   P + ++FPFVV+ NK+D   RA  +K A+ WC+S NN  I +FETSAKEALN+DQAF+T A+
Sbjct:   19 VGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPGSFKSLDSWRDEFLIQASPRDPENFPFVVIANKIDLENRAVSVKRAQGWCQSKNN--IPYFETSAKEALNVDQAFLTVAK 171          
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: E9C627_CAPO3 (Ras family protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=E9C627_CAPO3)

HSP 1 Score: 218 bits (555), Expect = 1.670e-69
Identity = 101/155 (65.16%), Postives = 129/155 (83.23%), Query Frame = 0
Query:   15 VGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            VGKTSL+NQYV++++SNQY+A+IGADFLTKEVM+DDKLVT+QIWDTAGQERF+SLGVAFYRG+  CVLC+DV   +TFE LDSW++EF+I   P + ++FPFVV+GNK+D   RA   K A+AWC   NN  I +FETSAKE++N++QAF T A+
Sbjct:   19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDKLVTMQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTTPKTFETLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRAVSDKRAKAWCGQKNN--IPYFETSAKESINVEQAFQTIAK 171          
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: UPI001B7F78E8 (ras-related protein Rab-7a isoform X1 n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7F78E8)

HSP 1 Score: 219 bits (558), Expect = 1.740e-69
Identity = 101/155 (65.16%), Postives = 129/155 (83.23%), Query Frame = 0
Query:   15 VGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            VGKTSL+NQYV++++SNQY+A+IGADFLTKEV++DD+LVT+QIWDTAGQERF+SLGVAFYRG+  CVL +DV    TF+ LDSW++EF+I  GP + ++FPFVV+GNK+D   R  PLK  +AWC+S NN  I HFETSAKEA+N++QAF   AR
Sbjct:   53 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVLVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQAGPRDPENFPFVVLGNKIDLENRQVPLKRVQAWCQSKNN--IPHFETSAKEAINVEQAFQIIAR 205          
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: M1XMT6_9METZ (Ras-related GTPase n=1 Tax=Sycon ciliatum TaxID=27933 RepID=M1XMT6_9METZ)

HSP 1 Score: 218 bits (554), Expect = 2.370e-69
Identity = 102/155 (65.81%), Postives = 129/155 (83.23%), Query Frame = 0
Query:   15 VGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            VGKTSL+NQYV++++SNQY+A+IGADFLTKEVM+DD+LVTLQIWDTAGQERF+SLGVAFYRG+  CVL +DV    TF++LDSW++EF+I + P + D+FPFVV+GNKVD   RA   K A+AWC   NN  I +FETSAKEA+N++QAF T A+
Sbjct:   19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLTFDVTMPNTFKNLDSWRDEFLIQSSPRDPDNFPFVVLGNKVDLESRAVSTKRAQAWCTGKNN--IPYFETSAKEAINVEQAFQTIAK 171          
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: H3AK24_LATCH (Uncharacterized protein n=2 Tax=Sarcopterygii TaxID=8287 RepID=H3AK24_LATCH)

HSP 1 Score: 218 bits (554), Expect = 2.370e-69
Identity = 101/155 (65.16%), Postives = 126/155 (81.29%), Query Frame = 0
Query:   15 VGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            VGKTSL+NQYV++++SNQY+A+IGADFLTKEVM+DD+LVT+QIWDTAGQERF+SLGVAFYRG+  CVL +DV    TF  LDSW++EF+I   P + D+FPFVV+GNK+D   R  P K A+AWC+S N     +FETSAKEA+N+DQAF T AR
Sbjct:   19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSTPNTFRTLDSWRDEFLIQASPRDPDNFPFVVLGNKIDLDNRQVPTKRAQAWCQSKNGTP--YFETSAKEAINVDQAFQTIAR 171          
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Match: A0A3Q3AD07_KRYMA (Ras-related protein rab7 n=5 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q3AD07_KRYMA)

HSP 1 Score: 218 bits (554), Expect = 2.440e-69
Identity = 101/155 (65.16%), Postives = 129/155 (83.23%), Query Frame = 0
Query:   15 VGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDDKLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKEEFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHFETSAKEALNIDQAFITAAR 169
            VGKTSL+NQYV++++SNQY+A+IGADFLTKEVM+DD+LVT+QIWDTAGQERF+SLGVAFYRG+  CVL +DV    TF+ LDSW++EF+I   P + ++FPFVV+GNK+D   R  P K A+AWC+S NN  I +FETSAKEA+N++QAF T AR
Sbjct:   19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVPTKRAQAWCQSKNN--IPYFETSAKEAINVEQAFQTIAR 171          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113487.2811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4W5PLN6_9TELE2.210e-7067.10Uncharacterized protein n=2 Tax=Salmoninae TaxID=5... [more]
RAB7A_DICDI3.730e-7065.38Ras-related protein Rab-7a n=6 Tax=Dictyostelia Ta... [more]
B5X431_SALSA3.980e-7067.10Ras-related protein Rab-7a n=6 Tax=Salmoninae TaxI... [more]
A0A8C3ZJP7_9TELE5.470e-7066.03Ras-related protein rab7-like n=1 Tax=Denticeps cl... [more]
A0A834RGU1_SARSC1.670e-6964.52Ras-related protein Rab-7a n=1 Tax=Sarcoptes scabi... [more]
E9C627_CAPO31.670e-6965.16Ras family protein n=1 Tax=Capsaspora owczarzaki (... [more]
UPI001B7F78E81.740e-6965.16ras-related protein Rab-7a isoform X1 n=3 Tax=Acip... [more]
M1XMT6_9METZ2.370e-6965.81Ras-related GTPase n=1 Tax=Sycon ciliatum TaxID=27... [more]
H3AK24_LATCH2.370e-6965.16Uncharacterized protein n=2 Tax=Sarcopterygii TaxI... [more]
A0A3Q3AD07_KRYMA2.440e-6965.16Ras-related protein rab7 n=5 Tax=Percomorphaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 28..44
score: 23.89
coord: 5..26
score: 26.41
coord: 46..68
score: 54.84
coord: 112..125
score: 42.04
coord: 149..169
score: 37.55
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 15..169
e-value: 7.2E-8
score: -17.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 15..169
e-value: 5.5E-54
score: 195.4
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 7..168
e-value: 6.4E-11
score: 38.2
NoneNo IPR availableGENE3D3.40.50.300coord: 12..169
e-value: 1.5E-49
score: 169.8
NoneNo IPR availablePANTHERPTHR24073:SF890ZGC:100918coord: 14..169
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 14..169
NoneNo IPR availablePROSITEPS51419RABcoord: 1..169
score: 24.894
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 13..164
e-value: 7.8E-20
score: 69.3
IPR001806Small GTPasePFAMPF00071Rascoord: 14..169
e-value: 5.8E-43
score: 146.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113487contigM-pyrifera_M_contig113487:72..578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113487.2811.1mRNA_M-pyrifera_M_contig113487.2811.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113487 72..578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113487.2811.1 ID=prot_M-pyrifera_M_contig113487.2811.1|Name=mRNA_M-pyrifera_M_contig113487.2811.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
IRSYRWTISYRVPRVGKTSLLNQYVHRRYSNQYRASIGADFLTKEVMIDD
KLVTLQIWDTAGQERFRSLGVAFYRGSQACVLCYDVGNARTFEHLDSWKE
EFVIATGPAEADSFPFVVVGNKVDQPVRATPLKAAEAWCKSNNNPNIHHF
ETSAKEALNIDQAFITAAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase