mRNA_M-pyrifera_M_contig113399.2801.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113399.2801.1
Unique NamemRNA_M-pyrifera_M_contig113399.2801.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: A0A5A8D1H6_CAFRO (Calreticulin n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D1H6_CAFRO)

HSP 1 Score: 192 bits (489), Expect = 9.860e-58
Identity = 88/130 (67.69%), Postives = 107/130 (82.31%), Query Frame = 1 
Query:    1 QLGEWKHTSSLSNDADKGIQTGEDARHYSLTAPLDSSFDNTGKDLVVGYTVRHEQNLDCGGAYIKLLPEGVDAASFSGDSDYAIMFGPDVCGSATRKTHAIFTYKGNNLLSKKTIRTETDNLPHRFTLIV 390
            Q+G+W    SLS++ADKGIQTGEDAR YSLTAPLD+ F + G  L++ YTVRHEQNLDCGG+YIKL+  G DA  F GD+ YA+MFGPDVCG++TR+THAIFTYKG NLL+KK +R ETDN PHR+T +V
Sbjct:   45 QMGKWNWQPSLSDEADKGIQTGEDARFYSLTAPLDTEFTSEGNKLILSYTVRHEQNLDCGGSYIKLVNPGFDAKKFGGDTPYAVMFGPDVCGTSTRRTHAIFTYKGKNLLTKKNLRVETDNNPHRYTFVV 174
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: A0A7S1C8L2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8L2_9STRA)

HSP 1 Score: 162 bits (410), Expect = 7.270e-46
Identity = 79/138 (57.25%), Postives = 95/138 (68.84%), Query Frame = 1 
Query:   10 EWKHTSSLS-----------NDADKGIQTGEDARHYSLTAPLDSSFDNTGKDLVVGYTVRHEQNLDCGGAYIKLLPEGVDAASFSGDSDYAIMFGPDVCGSATRKTHAIFTYKGNNLLSKKTIRTETDNLPHRFTLIV 390
            +WK +S L            ++ D GIQTGEDAR Y L+A +   FDN GKDLV+ Y+V+HEQ++DCGGAYIKLLP G +   F GD+DYAIMFGPD+CG A RKTH IF YKG NL  KK  R ETD L H +TL+V
Sbjct:   52 DWKSSSELGAIDRTAGKWYGDEDDTGIQTGEDARFYGLSAEMAEEFDNDGKDLVIQYSVKHEQDIDCGGAYIKLLPPGFEQTKFGGDTDYAIMFGPDICGYAKRKTHVIFNYKGKNLEMKKEARCETDKLSHLYTLVV 189
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: A0A7R9Y995_9STRA (Calreticulin n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y995_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.310e-44
Identity = 78/134 (58.21%), Postives = 101/134 (75.37%), Query Frame = 1 
Query:    1 QLGEWKHTSSL--SNDADKGIQTGEDARHYSLTAPLDSSFDNTGKDLVVGYTVRHEQNLDCGGAYIKLLPEGVDAASFSGDSDYAIMFGPDVCGSATRKTHAIFTY--KGNNLLSKKTIRTETDNLPHRFTLIV 390
            +LG+W  T+ L   ++ADKG+QTG DAR + L++ L++ FDN  KDLV+ YTV+HEQ +DCGGAYIKLLP+ +D ASF GD++Y+IMFGPD+CGS T+KTH IF Y  K  NLL K  I+ ETD L H +TL V
Sbjct:   78 ELGKWTQTAGLWYGDEADKGLQTGPDARFFGLSSKLETPFDNKDKDLVISYTVKHEQKIDCGGAYIKLLPQ-MDQASFGGDTEYSIMFGPDICGSGTKKTHVIFHYPPKDENLLIKNDIKCETDQLSHMYTLKV 210
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: A0A7S4QKP3_9STRA (Calreticulin n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QKP3_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.270e-43
Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 1 
Query:    1 QLGEWKHTSS--LSNDADKGIQTGEDARHYSLTAPLDSSFDNT-GKDLVVGYTVRHEQNLDCGGAYIKLLP-EGVDAASFSGDSDYAIMFGPDVCGSATRKTHAIF--TYKGNNLLSKKTIRTETDNLPHRFTLIV 390
            ++G+WKHT+     + +DKGIQT EDAR Y L+APL  +F+++ GKDLV+ Y+V+HEQNLDCGGAYIKLLP +  DAA+F GD+ Y++MFGPD+CG + ++TH I     K +NLL KK I TETDNL H +TL+V
Sbjct:   74 EMGKWKHTAGEYYGDSSDKGIQTSEDARFYGLSAPLTKTFNSSDGKDLVLQYSVKHEQNLDCGGAYIKLLPGDNFDAANFGGDTPYSVMFGPDICGHSNKRTHVILHSDNKNDNLLIKKDIPTETDNLTHLYTLVV 209
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: A0A7S1Y210_9STRA (Calreticulin n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y210_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.400e-43
Identity = 75/136 (55.15%), Postives = 100/136 (73.53%), Query Frame = 1 
Query:    1 QLGEWKHTSS--LSNDADKGIQTGEDARHYSLTAPLDSSFDNTGKDLVVGYTVRHEQNLDCGGAYIKLLPEG--VDAASFSGDSDYAIMFGPDVCGSATRKTHAIFTY--KGNNLLSKKTIRTETDNLPHRFTLIV 390
            ++G+W HT+    ++  DKGIQT EDAR Y L+A LD  F + GK+LV+ Y+V+HEQNLDCGGAYIKL+P G   DA SF GD+ Y++MFGPD+CGS+ ++TH I  Y  K  NLL KK + TE+DN+ H +TL+V
Sbjct:   76 EMGKWAHTAGEWYADKEDKGIQTSEDARFYGLSAKLDKPFKSDGKELVIQYSVKHEQNLDCGGAYIKLMPGGKKFDAKSFGGDTPYSVMFGPDICGSSNKRTHVILNYAPKDENLLIKKNVNTESDNVTHLYTLVV 211
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: A0A6V1P0W5_HETAK (Calreticulin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P0W5_HETAK)

HSP 1 Score: 154 bits (389), Expect = 5.970e-43
Identity = 74/132 (56.06%), Postives = 97/132 (73.48%), Query Frame = 1 
Query:    1 QLGEWKHTSS--LSNDADKGIQTGEDARHYSLTAPLDSSFDNTGKDLVVGYTVRHEQNLDCGGAYIKLLPEGVDAASFSGDSDYAIMFGPDVCGSATRKTHAIFTYKGNNLLSKKTIRTETDNLPHRFTLIV 390
            ++G W HT+     ++ DKGIQTGEDAR Y L+A +  +FDN GKD+VV +TV+HEQ +DCGGAYIK+L   VD  SF GD+ Y+IMFGPD+CG+ T+KTHAIF+Y   NLL K  ++ E+D L H +TL V
Sbjct:   47 EMGNWVHTAGEWYGDENDKGIQTGEDARFYGLSAAMPEAFDNDGKDIVVQFTVKHEQKIDCGGAYIKILGPDVDQESFGGDTPYSIMFGPDICGN-TKKTHAIFSYNDENLLIKDQVKCESDQLSHLYTLHV 177
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: A0A0U9HRK0_KLENI (Calreticulin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HRK0_KLENI)

HSP 1 Score: 154 bits (388), Expect = 1.250e-42
Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 1 
Query:    7 GEWKHTSSL---SNDADKGIQTGEDARHYSLTAPLDSSFDNTGKDLVVGYTVRHEQNLDCGGAYIKLLPEGVDAASFSGDSDYAIMFGPDVCGSATRKTHAIFTYKGNNLLSKKTIRTETDNLPHRFTLIV 390
            GEW HT+        ADKGIQT  DAR Y++ APL    DN GKDLV+ ++V+HEQ LDCGG YIKL+P+ V+   F GD+DY+IMFGPD+CG  T+K HAI TYKG NLL K  +  ETD L H +TL++
Sbjct:   51 GEWIHTAGKWYGDEKADKGIQTSPDARFYAIAAPLAKPLDNAGKDLVLQFSVKHEQKLDCGGGYIKLMPD-VEIKDFGGDTDYSIMFGPDICGYTTKKVHAIITYKGKNLLLKPEVTCETDQLTHVYTLVI 180
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: A0A7S1ZF32_TRICV (Calreticulin n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZF32_TRICV)

HSP 1 Score: 152 bits (383), Expect = 5.430e-42
Identity = 77/137 (56.20%), Postives = 101/137 (73.72%), Query Frame = 1 
Query:    1 QLGEWKHTSS--LSNDADKGIQTGEDARHYSLTAPLDSSFDNT-GKDLVVGYTVRHEQNLDCGGAYIKLLPEGVDAAS--FSGDSDYAIMFGPDVCGSATRKTHAIFTY--KGNNLLSKKTIRTETDNLPHRFTLIV 390
            ++GEWKHT+     ++ADKGIQTG DAR + ++A +D  FD++ GKDLV+ Y+V+HEQ++DCGGAYIKLLP G   AS  F GD+ YA+MFGPD+CGS+ +KTH I  Y  K +NLL KK I  E D L H +TL+V
Sbjct:   46 EMGEWKHTAGKWYGDEADKGIQTGPDARFFGISAKMDKVFDSSDGKDLVIQYSVKHEQSIDCGGAYIKLLPGGDSFASAKFGGDTKYAVMFGPDICGSSNKKTHTILHYEKKADNLLIKKEIPCENDQLSHLYTLVV 182
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: A0A7S3LFG2_9STRA (Calreticulin n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFG2_9STRA)

HSP 1 Score: 151 bits (382), Expect = 8.760e-42
Identity = 75/136 (55.15%), Postives = 100/136 (73.53%), Query Frame = 1 
Query:    1 QLGEWKHTSS--LSNDADKGIQTGEDARHYSLTAPLDSSFDNTGKDLVVGYTVRHEQNLDCGGAYIKLLPEG--VDAASFSGDSDYAIMFGPDVCGSATRKTHAIF--TYKGNNLLSKKTIRTETDNLPHRFTLIV 390
            ++G WKHT+    +++ADKGIQTGEDAR Y ++AP+   F +  K+LV+ Y+V+HEQNLDCGGAYIKLLP G     A F GD+ YA+MFGPD+CGS+ +KTH I     K +NLL KK + TE+D+L H +TL+V
Sbjct:   46 EMGTWKHTAGQWYADEADKGIQTGEDARFYGISAPMSKPFVSGDKELVLQYSVKHEQNLDCGGAYIKLLPGGKKFPTAEFGGDTPYAVMFGPDICGSSNKKTHVILHSDKKDDNLLIKKEVPTESDDLTHLYTLVV 181
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BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Match: UPI0007121614 (calreticulin n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007121614)

HSP 1 Score: 151 bits (381), Expect = 8.780e-42
Identity = 71/132 (53.79%), Postives = 97/132 (73.48%), Query Frame = 1 
Query:    1 QLGEWKHTSS--LSNDADKGIQTGEDARHYSLTAPLDSSFDNTGKDLVVGYTVRHEQNLDCGGAYIKLLPEGVDAASFSGDSDYAIMFGPDVCGSATRKTHAIFTYKGNNLLSKKTIRTETDNLPHRFTLIV 390
            ++GEW  T+    ++  DKGIQT +DAR Y  +A +++ F+N GK LV+ +T ++EQ++DCGGAYIKLLP G+D ASF GDS+Y+IMFGPDVCG++ +KTH IF YK  NL S +  R   DNL H +TLI+
Sbjct:   43 EMGEWAWTAGKWYADAEDKGIQTSQDARFYGYSAKMNNVFNNEGKTLVLQFTTKYEQDIDCGGAYIKLLPSGLDQASFGGDSEYSIMFGPDVCGASNKKTHIIFHYKNQNLESTEKFRAVIDNLSHMYTLII 174
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113399.2801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D1H6_CAFRO9.860e-5867.69Calreticulin n=3 Tax=Cafeteria roenbergensis TaxID... [more]
A0A7S1C8L2_9STRA7.270e-4657.25Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7R9Y995_9STRA3.310e-4458.21Calreticulin n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A7S4QKP3_9STRA2.270e-4357.35Calreticulin n=4 Tax=Ditylum brightwellii TaxID=49... [more]
A0A7S1Y210_9STRA2.400e-4355.15Calreticulin n=2 Tax=Grammatophora oceanica TaxID=... [more]
A0A6V1P0W5_HETAK5.970e-4356.06Calreticulin n=1 Tax=Heterosigma akashiwo TaxID=28... [more]
A0A0U9HRK0_KLENI1.250e-4256.49Calreticulin n=1 Tax=Klebsormidium nitens TaxID=10... [more]
A0A7S1ZF32_TRICV5.430e-4256.20Calreticulin n=1 Tax=Trieres chinensis TaxID=15141... [more]
A0A7S3LFG2_9STRA8.760e-4255.15Calreticulin n=1 Tax=Amphora coffeiformis TaxID=26... [more]
UPI00071216148.780e-4253.79calreticulin n=1 Tax=Blastocystis sp. subtype 4 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113399contigM-pyrifera_M_contig113399:188..577 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score153.3
Seed ortholog evalue7.8e-35
Seed eggNOG ortholog159749.K0SAG6
Preferred nameCALR
KEGG koko:K08057,ko:K10098
KEGG Pathwayko04141,ko04145,ko04612,ko05142,ko05166,map04141,map04145,map04612,map05142,map05166
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0001669,GO:0001846,GO:0001848,GO:0001849,GO:0002376,GO:0002396,GO:0002397,GO:0002474,GO:0002478,GO:0002479,GO:0002501,GO:0002502,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0005102,GO:0005178,GO:0005488,GO:0005506,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005790,GO:0005793,GO:0005794,GO:0005829,GO:0005844,GO:0005886,GO:0006355,GO:0006357,GO:0006417,GO:0006457,GO:0006611,GO:0006807,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006897,GO:0006898,GO:0006906,GO:0006909,GO:0006911,GO:0006913,GO:0006950,GO:0006984,GO:0006986,GO:0006996,GO:0007010,GO:0007044,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007417,GO:0007422,GO:0007507,GO:0007568,GO:0007569,GO:0007588,GO:0007610,GO:0007635,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008284,GO:0009266,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009636,GO:0009719,GO:0009725,GO:0009755,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009897,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010226,GO:0010324,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010594,GO:0010595,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010632,GO:0010634,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010770,GO:0010810,GO:0010811,GO:0010941,GO:0010948,GO:0012501,GO:0012505,GO:0012506,GO:0014070,GO:0014706,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016528,GO:0016529,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019882,GO:0019884,GO:0019899,GO:0019953,GO:0022008,GO:0022414,GO:0022417,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030003,GO:0030029,GO:0030036,GO:0030100,GO:0030139,GO:0030141,GO:0030154,GO:0030155,GO:0030176,GO:0030246,GO:0030334,GO:0030335,GO:0030336,GO:0030421,GO:0030431,GO:0030496,GO:0030518,GO:0030522,GO:0030659,GO:0030666,GO:0030670,GO:0030865,GO:0030866,GO:0030968,GO:0031012,GO:0031090,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031581,GO:0031625,GO:0031647,GO:0031958,GO:0031967,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0031984,GO:0032101,GO:0032103,GO:0032268,GO:0032269,GO:0032355,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0033143,GO:0033144,GO:0033218,GO:0033365,GO:0033554,GO:0033574,GO:0033993,GO:0034248,GO:0034249,GO:0034329,GO:0034330,GO:0034504,GO:0034613,GO:0034620,GO:0034622,GO:0034975,GO:0034976,GO:0035051,GO:0035257,GO:0035258,GO:0035966,GO:0035967,GO:0036500,GO:0040012,GO:0040013,GO:0040017,GO:0040020,GO:0042048,GO:0042127,GO:0042175,GO:0042221,GO:0042277,GO:0042493,GO:0042562,GO:0042590,GO:0042592,GO:0042692,GO:0042824,GO:0042886,GO:0042921,GO:0042981,GO:0043067,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044183,GO:0044238,GO:0044322,GO:0044389,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044877,GO:0045169,GO:0045184,GO:0045335,GO:0045471,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045785,GO:0045786,GO:0045787,GO:0045807,GO:0045892,GO:0045934,GO:0046677,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048232,GO:0048284,GO:0048385,GO:0048387,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048699,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0048878,GO:0050681,GO:0050764,GO:0050766,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050821,GO:0050839,GO:0050896,GO:0050920,GO:0050921,GO:0051049,GO:0051050,GO:0051082,GO:0051087,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051146,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051208,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051270,GO:0051271,GO:0051272,GO:0051427,GO:0051445,GO:0051604,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051961,GO:0055007,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060205,GO:0060255,GO:0060284,GO:0060537,GO:0060627,GO:0061024,GO:0061025,GO:0061061,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070887,GO:0071156,GO:0071157,GO:0071241,GO:0071248,GO:0071285,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071556,GO:0071682,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0080090,GO:0090174,GO:0090398,GO:0097159,GO:0097223,GO:0097305,GO:0097708,GO:0098552,GO:0098553,GO:0098588,GO:0098657,GO:0098771,GO:0098796,GO:0098805,GO:0098827,GO:0099024,GO:0099503,GO:1900024,GO:1900026,GO:1901163,GO:1901164,GO:1901222,GO:1901224,GO:1901363,GO:1901564,GO:1901654,GO:1901700,GO:1902531,GO:1902533,GO:1902679,GO:1903506,GO:1903507,GO:1990668,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000145,GO:2000146,GO:2000147,GO:2000241,GO:2000242,GO:2000508,GO:2000510,GO:2001141
EggNOG free text desc.Calreticulin family
EggNOG OGs2XAPD@2836,KOG0674@1,KOG0674@2759
COG Functional cat.O
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110,ko04091
Exons1
Model size390
Cds size390
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815649.1304317-CDS-M-pyrifera_M_contig113399:187..5771622815649.1304317-CDS-M-pyrifera_M_contig113399:187..577Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113399 188..577 +
1692277504.4558928-CDS-M-pyrifera_M_contig113399:187..5771692277504.4558928-CDS-M-pyrifera_M_contig113399:187..577Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113399 188..577 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113399.2801.1prot_M-pyrifera_M_contig113399.2801.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113399 188..577 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113399.2801.1

>prot_M-pyrifera_M_contig113399.2801.1 ID=prot_M-pyrifera_M_contig113399.2801.1|Name=mRNA_M-pyrifera_M_contig113399.2801.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
QLGEWKHTSSLSNDADKGIQTGEDARHYSLTAPLDSSFDNTGKDLVVGYT
VRHEQNLDCGGAYIKLLPEGVDAASFSGDSDYAIMFGPDVCGSATRKTHA
IFTYKGNNLLSKKTIRTETDNLPHRFTLIV
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mRNA from alignment at M-pyrifera_M_contig113399:188..577+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113399.2801.1 ID=mRNA_M-pyrifera_M_contig113399.2801.1|Name=mRNA_M-pyrifera_M_contig113399.2801.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig113399:188..577+ (Macrocystis pyrifera P11B4 male)
CAGCTTGGTGAATGGAAGCACACTTCGTCTCTGTCGAACGATGCGGACAA
GGGGATCCAGACTGGGGAAGACGCCCGCCACTACTCGCTCACCGCGCCTT
TGGATTCTTCGTTCGACAACACTGGCAAGGATTTGGTGGTTGGGTACACT
GTCCGCCACGAGCAGAACCTGGACTGCGGCGGCGCGTACATCAAGCTTCT
CCCCGAGGGCGTGGATGCAGCCAGTTTCAGCGGAGACAGCGACTACGCGA
TCATGTTCGGTCCCGACGTGTGCGGCAGCGCCACCCGCAAGACGCACGCG
ATTTTCACGTACAAGGGCAACAACCTGCTGAGCAAGAAGACGATCCGCAC
GGAGACGGACAACCTGCCGCACCGCTTCACGCTGATCGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113399:188..577+

>mRNA_M-pyrifera_M_contig113399.2801.1 ID=mRNA_M-pyrifera_M_contig113399.2801.1|Name=mRNA_M-pyrifera_M_contig113399.2801.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig113399:188..577+ (Macrocystis pyrifera P11B4 male)
CAGCTTGGTGAATGGAAGCACACTTCGTCTCTGTCGAACGATGCGGACAA
GGGGATCCAGACTGGGGAAGACGCCCGCCACTACTCGCTCACCGCGCCTT
TGGATTCTTCGTTCGACAACACTGGCAAGGATTTGGTGGTTGGGTACACT
GTCCGCCACGAGCAGAACCTGGACTGCGGCGGCGCGTACATCAAGCTTCT
CCCCGAGGGCGTGGATGCAGCCAGTTTCAGCGGAGACAGCGACTACGCGA
TCATGTTCGGTCCCGACGTGTGCGGCAGCGCCACCCGCAAGACGCACGCG
ATTTTCACGTACAAGGGCAACAACCTGCTGAGCAAGAAGACGATCCGCAC
GGAGACGGACAACCTGCCGCACCGCTTCACGCTGATCGTGCAGCTTGGTG
AATGGAAGCACACTTCGTCTCTGTCGAACGATGCGGACAAGGGGATCCAG
ACTGGGGAAGACGCCCGCCACTACTCGCTCACCGCGCCTTTGGATTCTTC
GTTCGACAACACTGGCAAGGATTTGGTGGTTGGGTACACTGTCCGCCACG
AGCAGAACCTGGACTGCGGCGGCGCGTACATCAAGCTTCTCCCCGAGGGC
GTGGATGCAGCCAGTTTCAGCGGAGACAGCGACTACGCGATCATGTTCGG
TCCCGACGTGTGCGGCAGCGCCACCCGCAAGACGCACGCGATTTTCACGT
ACAAGGGCAACAACCTGCTGAGCAAGAAGACGATCCGCACGGAGACGGAC
AACCTGCCGCACCGCTTCACGCTGATCGTG
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