prot_M-pyrifera_M_contig113380.2795.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113380.2795.1
Unique Nameprot_M-pyrifera_M_contig113380.2795.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length193
Homology
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A482RG48_9ARCH (DNA repair and recombination protein RadA n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RG48_9ARCH)

HSP 1 Score: 290 bits (741), Expect = 1.810e-95
Identity = 139/192 (72.40%), Postives = 167/192 (86.98%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 192
            EL+GEFRTGKTQLCHTLCVTCQLP++QGG EGK +YIDTEGTFRP RLV+IA RYGLNPDDVL+NV+YA+A+NSDHQ++LLEQAC M++E+RYAL+I+DS T LFRTDYTGRGELA RQ+KL QFLR+L R++  +GVA V+TNQVVATVD    F  GPQ K +GG+++AHASTTRL LRKGR E R+ K+
Sbjct:  125 ELFGEFRTGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDTEGTFRPQRLVEIATRYGLNPDDVLDNVSYAKAFNSDHQMTLLEQACGMMTESRYALLIIDSATALFRTDYTGRGELAARQMKLAQFLRRLQRIADEFGVAVVVTNQVVATVDAAVSF--GPQVKPIGGNIMAHASTTRLFLRKGRGENRVCKV 314          
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A7S1NHM7_9EUGL (DNA repair protein RAD51 homolog n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NHM7_9EUGL)

HSP 1 Score: 281 bits (718), Expect = 8.660e-92
Identity = 138/192 (71.88%), Postives = 166/192 (86.46%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 192
            E++GEFRTGKTQLCHTLCV+CQLP+ QGG EGK LYIDTEGTFRP R   IAERYGL+PDDVL+N+AYARA+NSDHQ+ LL QA AM+ E+RYAL+I+DS T LFRTDY+GRGEL+ RQ+ L ++LR L+RL+  +G+A VITNQVVA VDGGA+FAA P+ K +GGH++AHASTTRL+LRKGR EQRI KI
Sbjct:  138 EMFGEFRTGKTQLCHTLCVSCQLPLSQGGGEGKALYIDTEGTFRPERCRAIAERYGLDPDDVLDNIAYARAFNSDHQMQLLVQASAMMVESRYALLIIDSATALFRTDYSGRGELSARQMSLAKYLRMLARLADEFGIAVVITNQVVAQVDGGAMFAADPK-KPIGGHIMAHASTTRLSLRKGRNEQRICKI 328          
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A176VK16_MARPO (DNA repair protein RAD51 homolog n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VK16_MARPO)

HSP 1 Score: 277 bits (708), Expect = 1.830e-90
Identity = 135/193 (69.95%), Postives = 168/193 (87.05%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV 193
            E+YGEFRTGKTQLCHTLCVTCQLP++QGG EGK LYID EGTFRP RL++IAERYGLN +DVL+NVAYARAYN+DHQ  LL +A +M+ E+R+AL+I+DS T L+RTD++GRGEL+ RQ+ LG+F+R L +++  +GVA VITNQVVA VDG A+FA GPQ K +GG+++AHASTTRL+LRKGRAE+RI KIV
Sbjct:  124 EIYGEFRTGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIAERYGLNGNDVLDNVAYARAYNTDHQSKLLIEAASMMVESRFALMIIDSATALYRTDFSGRGELSARQMHLGRFMRSLQKIADEFGVAVVITNQVVAQVDGAAMFA-GPQVKPIGGNIIAHASTTRLSLRKGRAEERICKIV 315          
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: F2UAV3_SALR5 (DNA repair protein RAD51 homolog n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UAV3_SALR5)

HSP 1 Score: 276 bits (706), Expect = 2.940e-90
Identity = 136/192 (70.83%), Postives = 166/192 (86.46%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 192
            E++GEFRTGKTQLCHTL VTCQLP++QGGAEGK LYIDTEGTFRP RL+ +AERYGL+ +DVL+NVAYARAYNSDHQ+ LL+QA AM++E+RYAL++VDS T LFRTDY+GRGEL+ RQ+ L QFLR L RL+  +G+A VITNQVVA VDG A+FAA P+ K +GG+++AHASTTRL LRKGR E R+ K+
Sbjct:  117 EMFGEFRTGKTQLCHTLAVTCQLPIDQGGAEGKCLYIDTEGTFRPERLLAVAERYGLSGEDVLDNVAYARAYNSDHQMHLLQQASAMMAESRYALMVVDSATALFRTDYSGRGELSARQMALAQFLRTLMRLADEFGIAVVITNQVVAQVDGAAMFAADPK-KPIGGNIMAHASTTRLYLRKGRGETRVCKV 307          
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A7J8Q807_GOSRA (Uncharacterized protein (Fragment) n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A7J8Q807_GOSRA)

HSP 1 Score: 272 bits (696), Expect = 3.010e-90
Identity = 134/193 (69.43%), Postives = 164/193 (84.97%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV 193
            E+YGEFR+GKTQLCHTLCVTCQLP++QGG EGK +YID EGTFRP RL++IAER+GLN  DVLENVAYARAYN+DHQ  LL +A +M+ E R+AL+IVDS T L+RTD+TGRGEL+ RQ+ L +FLR L +L+  +GVA VITNQVVA VDG A+FA GPQ K +GG+++AHASTTRLA+RKGR E+RI KI+
Sbjct:   11 EIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAERFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFTGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA-GPQIKPIGGNIMAHASTTRLAVRKGRGEERICKII 202          
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: UPI000D1C5D62 (DNA repair protein RAD51 homolog n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C5D62)

HSP 1 Score: 276 bits (706), Expect = 3.790e-90
Identity = 136/193 (70.47%), Postives = 166/193 (86.01%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV 193
            E+YGEFRTGKTQLCHTLCVTCQLP++QGG EGK LYID EGTFRP RL++IAERYGLN  DVL+N+AYARAYN+DHQ  LL +A +M++E+R+AL+IVDS T L+RTD++GRGEL+ RQ+ L +FLR L +L+  +GVA V+TNQVVA VDG AVFA GPQ K +GG+++AHASTTRLALRKGR E+RI KIV
Sbjct:  125 EIYGEFRTGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIAERYGLNGADVLDNIAYARAYNTDHQSQLLLEAASMMAESRFALMIVDSATALYRTDFSGRGELSARQMHLARFLRSLQKLADEFGVAVVLTNQVVAQVDGSAVFA-GPQVKPIGGNIIAHASTTRLALRKGRGEERICKIV 316          
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A7S1EQT7_9RHOD (DNA repair protein RAD51 homolog n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQT7_9RHOD)

HSP 1 Score: 276 bits (705), Expect = 3.790e-90
Identity = 138/192 (71.88%), Postives = 161/192 (83.85%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 192
            EL+GEFRTGKTQ+CHT+CVTCQLP   GGAEGK +YID EGTFRP RLV IAERYGL+P +VL+NVAYARA+NSDHQ+ LL  ACAM+SE+RYALI+VDS T  +RTDY GRGELA RQ  LG+FLRQL R++  +GVA VITNQVVA VDGGA+FAA P+ K +GG+++AHAS TRL LRKGR E RI KI
Sbjct:  114 ELFGEFRTGKTQICHTICVTCQLPANVGGAEGKAMYIDAEGTFRPERLVSIAERYGLDPQNVLDNVAYARAHNSDHQMQLLSAACAMMSESRYALIVVDSATANYRTDYNGRGELAARQQHLGKFLRQLQRIADEFGVAVVITNQVVAQVDGGAMFAADPK-KPIGGNIIAHASQTRLYLRKGRGENRICKI 304          
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A7R9Y790_9VIRI (DNA repair protein RAD51 homolog n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y790_9VIRI)

HSP 1 Score: 275 bits (703), Expect = 1.300e-89
Identity = 136/193 (70.47%), Postives = 162/193 (83.94%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV 193
            E+YGEFRTGKTQLCHTLCVTCQLP++QGG EGK LYIDTEGTFRP RLV+IAER+GLN  DVL+NVAYARAYNSDHQ  LL QA +M++E R+AL+IVDS T L+RTDY GRGEL+ RQ+ LG+FLR L RL+  +G+A V+TNQVVA VDGG + A GPQ   +GG+++AHASTTRL L+KGR E R+ KIV
Sbjct:  131 EIYGEFRTGKTQLCHTLCVTCQLPMDQGGGEGKALYIDTEGTFRPQRLVQIAERFGLNAQDVLDNVAYARAYNSDHQSQLLLQAASMMTEQRFALLIVDSATALYRTDYNGRGELSARQVHLGRFLRSLQRLADEFGIAVVVTNQVVAKVDGGPM-AFGPQIAPIGGNIIAHASTTRLWLKKGRGENRVCKIV 322          
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: M2XXV9_GALSU (DNA repair protein RAD51 homolog n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXV9_GALSU)

HSP 1 Score: 275 bits (703), Expect = 2.350e-89
Identity = 137/192 (71.35%), Postives = 162/192 (84.38%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 192
            EL+GEFRTGKTQLCHTLCVTCQLP+E GG EGK LYID+EGTFRP R+V I+ERYGLN +DVL N+A ARAYNSDHQ+ LL QACA+++E+RYALIIVDS T L+RTDY+GRGELA RQ  + +FLR L +L+  +GVA VITNQVVA VDGGA+FA  P+ K +GG+++AHAS TRL LRKGRAE RI KI
Sbjct:  150 ELFGEFRTGKTQLCHTLCVTCQLPIENGGGEGKALYIDSEGTFRPERIVAISERYGLNSEDVLNNIAVARAYNSDHQLQLLTQACALMAESRYALIIVDSATALYRTDYSGRGELAARQQHMARFLRALQKLADEFGVAVVITNQVVAQVDGGAMFAVDPK-KPIGGNIIAHASQTRLYLRKGRAENRICKI 340          
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A8J5X7A5_DIALT (DNA repair protein RAD51 homolog n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7A5_DIALT)

HSP 1 Score: 274 bits (701), Expect = 2.380e-89
Identity = 134/192 (69.79%), Postives = 163/192 (84.90%), Query Frame = 0
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 192
            E+YGEFRTGKTQLCHTL VTCQLP+EQGG EGK LYIDTEGTFRP RL++IA+RY ++P  VL+NV YARA+N+DHQ+ LL  A AM++E+RYAL+IVDS T L+RTDY+GRGEL+ RQ+ L +FLR LSRL++ YGVACVITNQVVA VDG A+F  GPQ K +GG+++AHASTTRL  RKGR E R++KI
Sbjct:  129 EMYGEFRTGKTQLCHTLAVTCQLPLEQGGGEGKCLYIDTEGTFRPQRLIEIAQRYQMDPQSVLDNVNYARAFNTDHQMQLLLHAAAMMAESRYALLIVDSATALYRTDYSGRGELSARQVHLAKFLRMLSRLASEYGVACVITNQVVAMVDGQAMF--GPQVKPIGGNIIAHASTTRLYFRKGRGENRVVKI 318          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482RG48_9ARCH1.810e-9572.40DNA repair and recombination protein RadA n=1 Tax=... [more]
A0A7S1NHM7_9EUGL8.660e-9271.88DNA repair protein RAD51 homolog n=1 Tax=Eutreptie... [more]
A0A176VK16_MARPO1.830e-9069.95DNA repair protein RAD51 homolog n=2 Tax=Marchanti... [more]
F2UAV3_SALR52.940e-9070.83DNA repair protein RAD51 homolog n=1 Tax=Salpingoe... [more]
A0A7J8Q807_GOSRA3.010e-9069.43Uncharacterized protein (Fragment) n=1 Tax=Gossypi... [more]
UPI000D1C5D623.790e-9070.47DNA repair protein RAD51 homolog n=1 Tax=Selaginel... [more]
A0A7S1EQT7_9RHOD3.790e-9071.88DNA repair protein RAD51 homolog n=1 Tax=Timspurck... [more]
A0A7R9Y790_9VIRI1.300e-8970.47DNA repair protein RAD51 homolog n=1 Tax=Prasinode... [more]
M2XXV9_GALSU2.350e-8971.35DNA repair protein RAD51 homolog n=1 Tax=Galdieria... [more]
A0A8J5X7A5_DIALT2.380e-8969.79DNA repair protein RAD51 homolog n=1 Tax=Diacronem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 1..184
e-value: 4.4E-4
score: 29.6
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 1..193
e-value: 2.3E-90
score: 302.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..193
e-value: 4.7E-63
score: 215.0
NoneNo IPR availablePANTHERPTHR22942:SF39DNA REPAIR PROTEIN RAD51 HOMOLOG 1coord: 1..193
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 1..193
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 1..146
score: 38.378
IPR020587DNA recombination and repair protein RecA, monomer-monomer interfacePROSITEPS50163RECA_3coord: 153..193
score: 11.024
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113380contigM-pyrifera_M_contig113380:1..579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113380.2795.1mRNA_M-pyrifera_M_contig113380.2795.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113380 1..579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113380.2795.1 ID=prot_M-pyrifera_M_contig113380.2795.1|Name=mRNA_M-pyrifera_M_contig113380.2795.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVK
IAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDS
VTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATV
DGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR020587RecA_monomer-monomer_interface
IPR027417P-loop_NTPase