mRNA_M-pyrifera_M_contig113380.2795.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113380.2795.1
Unique NamemRNA_M-pyrifera_M_contig113380.2795.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A482RG48_9ARCH (DNA repair and recombination protein RadA n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RG48_9ARCH)

HSP 1 Score: 290 bits (741), Expect = 1.810e-95
Identity = 139/192 (72.40%), Postives = 167/192 (86.98%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 576
            EL+GEFRTGKTQLCHTLCVTCQLP++QGG EGK +YIDTEGTFRP RLV+IA RYGLNPDDVL+NV+YA+A+NSDHQ++LLEQAC M++E+RYAL+I+DS T LFRTDYTGRGELA RQ+KL QFLR+L R++  +GVA V+TNQVVATVD    F  GPQ K +GG+++AHASTTRL LRKGR E R+ K+
Sbjct:  125 ELFGEFRTGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDTEGTFRPQRLVEIATRYGLNPDDVLDNVSYAKAFNSDHQMTLLEQACGMMTESRYALLIIDSATALFRTDYTGRGELAARQMKLAQFLRRLQRIADEFGVAVVVTNQVVATVDAAVSF--GPQVKPIGGNIMAHASTTRLFLRKGRGENRVCKV 314
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A7S1NHM7_9EUGL (DNA repair protein RAD51 homolog n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NHM7_9EUGL)

HSP 1 Score: 281 bits (718), Expect = 8.660e-92
Identity = 138/192 (71.88%), Postives = 166/192 (86.46%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 576
            E++GEFRTGKTQLCHTLCV+CQLP+ QGG EGK LYIDTEGTFRP R   IAERYGL+PDDVL+N+AYARA+NSDHQ+ LL QA AM+ E+RYAL+I+DS T LFRTDY+GRGEL+ RQ+ L ++LR L+RL+  +G+A VITNQVVA VDGGA+FAA P+ K +GGH++AHASTTRL+LRKGR EQRI KI
Sbjct:  138 EMFGEFRTGKTQLCHTLCVSCQLPLSQGGGEGKALYIDTEGTFRPERCRAIAERYGLDPDDVLDNIAYARAFNSDHQMQLLVQASAMMVESRYALLIIDSATALFRTDYSGRGELSARQMSLAKYLRMLARLADEFGIAVVITNQVVAQVDGGAMFAADPK-KPIGGHIMAHASTTRLSLRKGRNEQRICKI 328
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A176VK16_MARPO (DNA repair protein RAD51 homolog n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VK16_MARPO)

HSP 1 Score: 277 bits (708), Expect = 1.830e-90
Identity = 135/193 (69.95%), Postives = 168/193 (87.05%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV 579
            E+YGEFRTGKTQLCHTLCVTCQLP++QGG EGK LYID EGTFRP RL++IAERYGLN +DVL+NVAYARAYN+DHQ  LL +A +M+ E+R+AL+I+DS T L+RTD++GRGEL+ RQ+ LG+F+R L +++  +GVA VITNQVVA VDG A+FA GPQ K +GG+++AHASTTRL+LRKGRAE+RI KIV
Sbjct:  124 EIYGEFRTGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIAERYGLNGNDVLDNVAYARAYNTDHQSKLLIEAASMMVESRFALMIIDSATALYRTDFSGRGELSARQMHLGRFMRSLQKIADEFGVAVVITNQVVAQVDGAAMFA-GPQVKPIGGNIIAHASTTRLSLRKGRAEERICKIV 315
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: F2UAV3_SALR5 (DNA repair protein RAD51 homolog n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UAV3_SALR5)

HSP 1 Score: 276 bits (706), Expect = 2.940e-90
Identity = 136/192 (70.83%), Postives = 166/192 (86.46%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 576
            E++GEFRTGKTQLCHTL VTCQLP++QGGAEGK LYIDTEGTFRP RL+ +AERYGL+ +DVL+NVAYARAYNSDHQ+ LL+QA AM++E+RYAL++VDS T LFRTDY+GRGEL+ RQ+ L QFLR L RL+  +G+A VITNQVVA VDG A+FAA P+ K +GG+++AHASTTRL LRKGR E R+ K+
Sbjct:  117 EMFGEFRTGKTQLCHTLAVTCQLPIDQGGAEGKCLYIDTEGTFRPERLLAVAERYGLSGEDVLDNVAYARAYNSDHQMHLLQQASAMMAESRYALMVVDSATALFRTDYSGRGELSARQMALAQFLRTLMRLADEFGIAVVITNQVVAQVDGAAMFAADPK-KPIGGNIMAHASTTRLYLRKGRGETRVCKV 307
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A7J8Q807_GOSRA (Uncharacterized protein (Fragment) n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A7J8Q807_GOSRA)

HSP 1 Score: 272 bits (696), Expect = 3.010e-90
Identity = 134/193 (69.43%), Postives = 164/193 (84.97%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV 579
            E+YGEFR+GKTQLCHTLCVTCQLP++QGG EGK +YID EGTFRP RL++IAER+GLN  DVLENVAYARAYN+DHQ  LL +A +M+ E R+AL+IVDS T L+RTD+TGRGEL+ RQ+ L +FLR L +L+  +GVA VITNQVVA VDG A+FA GPQ K +GG+++AHASTTRLA+RKGR E+RI KI+
Sbjct:   11 EIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAERFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFTGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA-GPQIKPIGGNIMAHASTTRLAVRKGRGEERICKII 202
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: UPI000D1C5D62 (DNA repair protein RAD51 homolog n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C5D62)

HSP 1 Score: 276 bits (706), Expect = 3.790e-90
Identity = 136/193 (70.47%), Postives = 166/193 (86.01%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV 579
            E+YGEFRTGKTQLCHTLCVTCQLP++QGG EGK LYID EGTFRP RL++IAERYGLN  DVL+N+AYARAYN+DHQ  LL +A +M++E+R+AL+IVDS T L+RTD++GRGEL+ RQ+ L +FLR L +L+  +GVA V+TNQVVA VDG AVFA GPQ K +GG+++AHASTTRLALRKGR E+RI KIV
Sbjct:  125 EIYGEFRTGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIAERYGLNGADVLDNIAYARAYNTDHQSQLLLEAASMMAESRFALMIVDSATALYRTDFSGRGELSARQMHLARFLRSLQKLADEFGVAVVLTNQVVAQVDGSAVFA-GPQVKPIGGNIIAHASTTRLALRKGRGEERICKIV 316
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A7S1EQT7_9RHOD (DNA repair protein RAD51 homolog n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQT7_9RHOD)

HSP 1 Score: 276 bits (705), Expect = 3.790e-90
Identity = 138/192 (71.88%), Postives = 161/192 (83.85%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 576
            EL+GEFRTGKTQ+CHT+CVTCQLP   GGAEGK +YID EGTFRP RLV IAERYGL+P +VL+NVAYARA+NSDHQ+ LL  ACAM+SE+RYALI+VDS T  +RTDY GRGELA RQ  LG+FLRQL R++  +GVA VITNQVVA VDGGA+FAA P+ K +GG+++AHAS TRL LRKGR E RI KI
Sbjct:  114 ELFGEFRTGKTQICHTICVTCQLPANVGGAEGKAMYIDAEGTFRPERLVSIAERYGLDPQNVLDNVAYARAHNSDHQMQLLSAACAMMSESRYALIVVDSATANYRTDYNGRGELAARQQHLGKFLRQLQRIADEFGVAVVITNQVVAQVDGGAMFAADPK-KPIGGNIIAHASQTRLYLRKGRGENRICKI 304
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A7R9Y790_9VIRI (DNA repair protein RAD51 homolog n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y790_9VIRI)

HSP 1 Score: 275 bits (703), Expect = 1.300e-89
Identity = 136/193 (70.47%), Postives = 162/193 (83.94%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV 579
            E+YGEFRTGKTQLCHTLCVTCQLP++QGG EGK LYIDTEGTFRP RLV+IAER+GLN  DVL+NVAYARAYNSDHQ  LL QA +M++E R+AL+IVDS T L+RTDY GRGEL+ RQ+ LG+FLR L RL+  +G+A V+TNQVVA VDGG + A GPQ   +GG+++AHASTTRL L+KGR E R+ KIV
Sbjct:  131 EIYGEFRTGKTQLCHTLCVTCQLPMDQGGGEGKALYIDTEGTFRPQRLVQIAERFGLNAQDVLDNVAYARAYNSDHQSQLLLQAASMMTEQRFALLIVDSATALYRTDYNGRGELSARQVHLGRFLRSLQRLADEFGIAVVVTNQVVAKVDGGPM-AFGPQIAPIGGNIIAHASTTRLWLKKGRGENRVCKIV 322
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: M2XXV9_GALSU (DNA repair protein RAD51 homolog n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXV9_GALSU)

HSP 1 Score: 275 bits (703), Expect = 2.350e-89
Identity = 137/192 (71.35%), Postives = 162/192 (84.38%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 576
            EL+GEFRTGKTQLCHTLCVTCQLP+E GG EGK LYID+EGTFRP R+V I+ERYGLN +DVL N+A ARAYNSDHQ+ LL QACA+++E+RYALIIVDS T L+RTDY+GRGELA RQ  + +FLR L +L+  +GVA VITNQVVA VDGGA+FA  P+ K +GG+++AHAS TRL LRKGRAE RI KI
Sbjct:  150 ELFGEFRTGKTQLCHTLCVTCQLPIENGGGEGKALYIDSEGTFRPERIVAISERYGLNSEDVLNNIAVARAYNSDHQLQLLTQACALMAESRYALIIVDSATALYRTDYSGRGELAARQQHMARFLRALQKLADEFGVAVVITNQVVAQVDGGAMFAVDPK-KPIGGNIIAHASQTRLYLRKGRAENRICKI 340
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BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Match: A0A8J5X7A5_DIALT (DNA repair protein RAD51 homolog n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7A5_DIALT)

HSP 1 Score: 274 bits (701), Expect = 2.380e-89
Identity = 134/192 (69.79%), Postives = 163/192 (84.90%), Query Frame = 1 
Query:    1 ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVKIAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDSVTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATVDGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKI 576
            E+YGEFRTGKTQLCHTL VTCQLP+EQGG EGK LYIDTEGTFRP RL++IA+RY ++P  VL+NV YARA+N+DHQ+ LL  A AM++E+RYAL+IVDS T L+RTDY+GRGEL+ RQ+ L +FLR LSRL++ YGVACVITNQVVA VDG A+F  GPQ K +GG+++AHASTTRL  RKGR E R++KI
Sbjct:  129 EMYGEFRTGKTQLCHTLAVTCQLPLEQGGGEGKCLYIDTEGTFRPQRLIEIAQRYQMDPQSVLDNVNYARAFNTDHQMQLLLHAAAMMAESRYALLIVDSATALYRTDYSGRGELSARQVHLAKFLRMLSRLASEYGVACVITNQVVAMVDGQAMF--GPQVKPIGGNIIAHASTTRLYFRKGRGENRVVKI 318
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113380.2795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482RG48_9ARCH1.810e-9572.40DNA repair and recombination protein RadA n=1 Tax=... [more]
A0A7S1NHM7_9EUGL8.660e-9271.88DNA repair protein RAD51 homolog n=1 Tax=Eutreptie... [more]
A0A176VK16_MARPO1.830e-9069.95DNA repair protein RAD51 homolog n=2 Tax=Marchanti... [more]
F2UAV3_SALR52.940e-9070.83DNA repair protein RAD51 homolog n=1 Tax=Salpingoe... [more]
A0A7J8Q807_GOSRA3.010e-9069.43Uncharacterized protein (Fragment) n=1 Tax=Gossypi... [more]
UPI000D1C5D623.790e-9070.47DNA repair protein RAD51 homolog n=1 Tax=Selaginel... [more]
A0A7S1EQT7_9RHOD3.790e-9071.88DNA repair protein RAD51 homolog n=1 Tax=Timspurck... [more]
A0A7R9Y790_9VIRI1.300e-8970.47DNA repair protein RAD51 homolog n=1 Tax=Prasinode... [more]
M2XXV9_GALSU2.350e-8971.35DNA repair protein RAD51 homolog n=1 Tax=Galdieria... [more]
A0A8J5X7A5_DIALT2.380e-8969.79DNA repair protein RAD51 homolog n=1 Tax=Diacronem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113380contigM-pyrifera_M_contig113380:1..579 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score276.2
Seed ortholog evalue1.2e-71
Seed eggNOG ortholog946362.XP_004993801.1
Preferred nameRAD51
KEGG koko:K04482
KEGG Pathwayko03440,ko03460,ko05200,ko05212,map03440,map03460,map05200,map05212
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000150,GO:0000166,GO:0000217,GO:0000228,GO:0000278,GO:0000280,GO:0000400,GO:0000709,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000730,GO:0000775,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000795,GO:0000800,GO:0001709,GO:0001932,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006275,GO:0006281,GO:0006282,GO:0006302,GO:0006310,GO:0006312,GO:0006323,GO:0006325,GO:0006342,GO:0006355,GO:0006403,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0007143,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007294,GO:0007389,GO:0007530,GO:0007531,GO:0007533,GO:0008022,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008156,GO:0008219,GO:0008298,GO:0008630,GO:0009058,GO:0009059,GO:0009314,GO:0009410,GO:0009628,GO:0009653,GO:0009719,GO:0009790,GO:0009792,GO:0009798,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009948,GO:0009949,GO:0009950,GO:0009951,GO:0009952,GO:0009953,GO:0009987,GO:0009994,GO:0010032,GO:0010033,GO:0010035,GO:0010212,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010569,GO:0010604,GO:0010605,GO:0010629,GO:0010833,GO:0010941,GO:0010948,GO:0012501,GO:0014070,GO:0014074,GO:0016043,GO:0016458,GO:0016462,GO:0016604,GO:0016605,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017151,GO:0019219,GO:0019220,GO:0019222,GO:0019899,GO:0019953,GO:0022402,GO:0022412,GO:0022413,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030261,GO:0030491,GO:0030554,GO:0030702,GO:0030706,GO:0030716,GO:0030717,GO:0031000,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031974,GO:0031981,GO:0032200,GO:0032268,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032505,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033170,GO:0033260,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0035556,GO:0035639,GO:0035690,GO:0035825,GO:0035861,GO:0036094,GO:0036270,GO:0036297,GO:0040029,GO:0042148,GO:0042221,GO:0042325,GO:0042493,GO:0042592,GO:0042623,GO:0042771,GO:0042802,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043073,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043279,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044786,GO:0044877,GO:0045003,GO:0045005,GO:0045165,GO:0045786,GO:0045814,GO:0045892,GO:0045934,GO:0045935,GO:0046483,GO:0048285,GO:0048468,GO:0048471,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051105,GO:0051106,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051246,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051276,GO:0051321,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0060548,GO:0061806,GO:0061982,GO:0061988,GO:0065001,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070182,GO:0070192,GO:0070316,GO:0070317,GO:0070727,GO:0070887,GO:0071103,GO:0071214,GO:0071241,GO:0071310,GO:0071312,GO:0071407,GO:0071417,GO:0071478,GO:0071479,GO:0071495,GO:0071704,GO:0071824,GO:0071840,GO:0072331,GO:0072332,GO:0072710,GO:0072711,GO:0072757,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090329,GO:0090734,GO:0090735,GO:0097159,GO:0097190,GO:0097193,GO:0097305,GO:0097306,GO:0097327,GO:0097329,GO:0097367,GO:0098687,GO:0099086,GO:0104004,GO:0110026,GO:0110027,GO:0140013,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901563,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902298,GO:1902679,GO:1902969,GO:1903046,GO:1903047,GO:1903506,GO:1903507,GO:1905334,GO:1990414,GO:1990426,GO:1990505,GO:1990918,GO:2000104,GO:2000112,GO:2000113,GO:2000779,GO:2001020,GO:2001141
EggNOG free text desc.Required both for recombination and for the repair of DNA damage caused by X-rays
EggNOG OGs38CS4@33154,COG0468@1,KOG1433@2759
COG Functional cat.L
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400,ko04121,ko04131
Exons1
Model size579
Cds size579
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815648.8856266-CDS-M-pyrifera_M_contig113380:0..5791622815648.8856266-CDS-M-pyrifera_M_contig113380:0..579Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113380 1..579 -
1692277504.3740134-CDS-M-pyrifera_M_contig113380:0..5791692277504.3740134-CDS-M-pyrifera_M_contig113380:0..579Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113380 1..579 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113380.2795.1prot_M-pyrifera_M_contig113380.2795.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113380 1..579 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113380.2795.1

>prot_M-pyrifera_M_contig113380.2795.1 ID=prot_M-pyrifera_M_contig113380.2795.1|Name=mRNA_M-pyrifera_M_contig113380.2795.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
ELYGEFRTGKTQLCHTLCVTCQLPVEQGGAEGKVLYIDTEGTFRPSRLVK
IAERYGLNPDDVLENVAYARAYNSDHQVSLLEQACAMLSEARYALIIVDS
VTNLFRTDYTGRGELADRQIKLGQFLRQLSRLSAIYGVACVITNQVVATV
DGGAVFAAGPQYKAVGGHVLAHASTTRLALRKGRAEQRILKIV
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mRNA from alignment at M-pyrifera_M_contig113380:1..579-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113380.2795.1 ID=mRNA_M-pyrifera_M_contig113380.2795.1|Name=mRNA_M-pyrifera_M_contig113380.2795.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=579bp|location=Sequence derived from alignment at M-pyrifera_M_contig113380:1..579- (Macrocystis pyrifera P11B4 male)
GAATTGTATGGCGAGTTCCGTACAGGAAAGACACAGCTCTGCCACACACT
CTGTGTGACATGCCAGCTGCCAGTAGAGCAAGGTGGTGCAGAAGGAAAAG
TGTTGTACATTGACACTGAAGGCACTTTCCGTCCATCTCGTTTGGTGAAG
ATTGCAGAGCGTTATGGGCTCAACCCTGACGATGTCTTGGAGAATGTAGC
CTATGCACGAGCATACAACTCAGATCACCAAGTGTCATTGTTGGAACAAG
CGTGTGCAATGCTCTCAGAAGCTCGCTATGCTCTCATCATTGTCGATAGC
GTCACCAACCTATTCCGGACTGATTACACAGGACGTGGTGAACTTGCAGA
TCGCCAAATCAAACTTGGCCAGTTTCTTCGTCAACTCTCTCGTCTCAGTG
CAATCTATGGTGTTGCTTGTGTCATCACAAATCAAGTCGTCGCCACAGTT
GATGGAGGTGCTGTATTCGCTGCAGGACCACAATACAAAGCCGTCGGAGG
CCATGTCCTTGCACATGCCTCCACTACCCGCCTCGCACTTCGCAAAGGTC
GTGCAGAACAACGCATCCTAAAAATCGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113380:1..579-

>mRNA_M-pyrifera_M_contig113380.2795.1 ID=mRNA_M-pyrifera_M_contig113380.2795.1|Name=mRNA_M-pyrifera_M_contig113380.2795.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig113380:1..579- (Macrocystis pyrifera P11B4 male)
GAATTGTATGGCGAGTTCCGTACAGGAAAGACACAGCTCTGCCACACACT
CTGTGTGACATGCCAGCTGCCAGTAGAGCAAGGTGGTGCAGAAGGAAAAG
TGTTGTACATTGACACTGAAGGCACTTTCCGTCCATCTCGTTTGGTGAAG
ATTGCAGAGCGTTATGGGCTCAACCCTGACGATGTCTTGGAGAATGTAGC
CTATGCACGAGCATACAACTCAGATCACCAAGTGTCATTGTTGGAACAAG
CGTGTGCAATGCTCTCAGAAGCTCGCTATGCTCTCATCATTGTCGATAGC
GTCACCAACCTATTCCGGACTGATTACACAGGACGTGGTGAACTTGCAGA
TCGCCAAATCAAACTTGGCCAGTTTCTTCGTCAACTCTCTCGTCTCAGTG
CAATCTATGGTGTTGCTTGTGTCATCACAAATCAAGTCGTCGCCACAGTT
GATGGAGGTGCTGTATTCGCTGCAGGACCACAATACAAAGCCGTCGGAGG
CCATGTCCTTGCACATGCCTCCACTACCCGCCTCGCACTTCGCAAAGGTC
GTGCAGAACAACGCATCCTAAAAATCGTCGAATTGTATGGCGAGTTCCGT
ACAGGAAAGACACAGCTCTGCCACACACTCTGTGTGACATGCCAGCTGCC
AGTAGAGCAAGGTGGTGCAGAAGGAAAAGTGTTGTACATTGACACTGAAG
GCACTTTCCGTCCATCTCGTTTGGTGAAGATTGCAGAGCGTTATGGGCTC
AACCCTGACGATGTCTTGGAGAATGTAGCCTATGCACGAGCATACAACTC
AGATCACCAAGTGTCATTGTTGGAACAAGCGTGTGCAATGCTCTCAGAAG
CTCGCTATGCTCTCATCATTGTCGATAGCGTCACCAACCTATTCCGGACT
GATTACACAGGACGTGGTGAACTTGCAGATCGCCAAATCAAACTTGGCCA
GTTTCTTCGTCAACTCTCTCGTCTCAGTGCAATCTATGGTGTTGCTTGTG
TCATCACAAATCAAGTCGTCGCCACAGTTGATGGAGGTGCTGTATTCGCT
GCAGGACCACAATACAAAGCCGTCGGAGGCCATGTCCTTGCACATGCCTC
CACTACCCGCCTCGCACTTCGCAAAGGTCGTGCAGAACAACGCATCCTAA
AAATCGTC
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