prot_M-pyrifera_M_contig113360.2792.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113360.2792.1
Unique Nameprot_M-pyrifera_M_contig113360.2792.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length151
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113360.2792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006530YD repeatTIGRFAMTIGR01643TIGR01643coord: 70..95
e-value: 8.5E-6
score: 24.1
coord: 25..59
e-value: 3.8E-9
score: 34.7
coord: 125..151
e-value: 3.6E-5
score: 22.1
coord: 75..106
e-value: 2.6E-6
score: 25.7
IPR031325RHS repeatPFAMPF05593RHS_repeatcoord: 70..90
e-value: 6.0E-5
score: 23.5
coord: 25..59
e-value: 3.2E-12
score: 46.7
coord: 75..109
e-value: 3.6E-8
score: 33.7
coord: 125..151
e-value: 3.4E-7
score: 30.6
NoneNo IPR availableGENE3D2.180.10.10coord: 6..151
e-value: 4.9E-18
score: 67.3
NoneNo IPR availablePANTHERPTHR32305:SF15PROTEIN RHSA-RELATEDcoord: 24..147
NoneNo IPR availablePANTHERPTHR32305FAMILY NOT NAMEDcoord: 24..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113360contigM-pyrifera_M_contig113360:1..453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113360.2792.1mRNA_M-pyrifera_M_contig113360.2792.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113360 1..453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113360.2792.1 ID=prot_M-pyrifera_M_contig113360.2792.1|Name=mRNA_M-pyrifera_M_contig113360.2792.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
RRLSTTLPDPDGAGGQSAPVSSTTYDDAGNVLTETDALGNVTTYEYDDLN
RVIKITSPDPDGAGSLTSPVTEYAYDEFGQMVTMTDPNGGETTYEYDDLG
RKVREIYADPDGAGALTSPEVSYVYDASGQMTSMTDELGTVTSYEYDNLG
R
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006530YD
IPR031325RHS_repeat