mRNA_M-pyrifera_M_contig113333.2785.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: L8H9T2_ACACA (Importin beta domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H9T2_ACACA) HSP 1 Score: 85.9 bits (211), Expect = 4.120e-16 Identity = 59/174 (33.91%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 49 EAARAERSQTDGWWRAREGVLHTLCKTVKFMAPAEDGRRKVYAGPRFPVAELLPILLRDLEPSLSPFLRGRALDCASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQGG-FPLRIGACKALKKFCA-LADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISILRSA 564
E+ + ++S WW+ RE + + T + + A G + +F A L P DL+ + SPFLRGRAL CAS + A+ D + F Q A ++ SQ P++I AC+AL +C L D+G + Q+ V GL + Q S ETLHL L+T + +L +A
Sbjct: 421 ESVKQQQSGNRSWWKLREASVLAVGSTAEVLINAPQG----FDHHQFMAAILQP----DLQTTASPFLRGRALWCASQFSHAVAA--------DKSLPFIQAAVASLQSQQDPLPVKICACRALASYCPKLEDKGVIGQMVPPTVQGLAVLLGQTSEETLHLTLETLLVVLSTA 578
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: A0A7D8V2E3_9TREE (Importin N-terminal domain-containing protein n=1 Tax=Vanrija humicola TaxID=5417 RepID=A0A7D8V2E3_9TREE) HSP 1 Score: 67.4 bits (163), Expect = 1.000e-9 Identity = 54/174 (31.03%), Postives = 84/174 (48.28%), Query Frame = 1
Query: 49 EAARAERSQTDGWWRARE---GVLHTLCKTVKFMAPA--EDGRRKVYAGPRFPVAELLPILLRDLEPSLSPFLRGRALDCASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQG-GFPLRIGACKALKKFCALADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISI 552
E+A A +S WW+ E G+L + ++ + E GR + P F +++P LL+ E +PFL+GRA + A G PQ Q+ + A A+GS P++I A K +K FC D M A ++ L +P+ SAETL+LV++T S+
Sbjct: 443 ESAAAHKSGNPDWWKPLETILGLLGGISDDLRTLLEEDQEAGRPATFDLP-FLFNQVIPDLLQQTE---APFLQGRAF----VFASQFAGLLPQALAQE----YLSTAILALGSPTTSVPVKISAVKTIKNFCRHVDASIMNPQAGKILSMLLPVLPETSAETLYLVMETVNSV 604
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: UPI0019D61120 (importin-9-like n=3 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D61120) HSP 1 Score: 61.6 bits (148), Expect = 9.620e-8 Identity = 49/174 (28.16%), Postives = 82/174 (47.13%), Query Frame = 1
Query: 49 EAARAERSQTDGWWRAREGVLHTLCKTVKFMAPAEDGRRKVYAGPRFPVAELLPILLRDLEPS---LSPFLRGRALDCASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQGGFPLRIGACKALKKFCALADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISILRS 561
E+ ++++ + WWR E L L + + A+D ++ V LL +L D+ + PFL RAL SI A+ + + S Q + AA AI S P+++GAC+ L + +D+ ++ ++ L + Q S ETLHLVL+T S ++S
Sbjct: 422 ESQESKQAGSPDWWRLHEASLFALGSLSEQLCEAQDS-----GFAKYNVQHLLEQMLTDIMATGVHQYPFLHARAL---SIVAKFSSVISKEASEQ-----YLSYAARAIASDVPPPVKVGACRTLAQLLPESDQDLIQPNVMGILSSLVDLLRQASDETLHLVLETLQSAIKS 582
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: A0A835ERY4_9POAL (Importin N-terminal domain-containing protein n=34 Tax=Panicoideae TaxID=147369 RepID=A0A835ERY4_9POAL) HSP 1 Score: 60.8 bits (146), Expect = 1.770e-7 Identity = 56/197 (28.43%), Postives = 91/197 (46.19%), Query Frame = 1
Query: 10 KIITTFQEV----IAEGEAARAERSQ------TDGWWRAREGVLHTLCKTVKFMAPAEDGRRKVYAGPRFPVAELLPILLRDLEPSLS---PFLRGRALDCASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQGGFPLRIGACKALKKFCALADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISILRS 561
+I+T +++ I E R SQ + WWR E L L + + A+D ++ V +LL +L D+ + + PFL RA SI A+ + +VS Q + AA AI S P+++GAC+AL + +++ ++ ++ L + Q S ETLHLVL+T S +RS
Sbjct: 399 EIVTAYEDYGLDSILEASKMRFNESQELKQAGSADWWRLHEASLFALGSLSEQLCEAQDS-----GFAKYNVRDLLQQMLTDIMVTGAHQYPFLHARAF---SIVAKFSSVISKEVSEQ-----YLCYAARAIASDVPPPVKVGACRALAQLLPESNQDLIQPNVMGILSSLVDLLRQASDETLHLVLETLQSAIRS 582
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: A0A453RB66_AEGTS (Uncharacterized protein n=4 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453RB66_AEGTS) HSP 1 Score: 54.7 bits (130), Expect = 2.020e-5 Identity = 46/175 (26.29%), Postives = 78/175 (44.57%), Query Frame = 1
Query: 49 EAARAERSQTDGWWRAREGVLHTLCKTVKFMAPAEDGRRKVYAGPRFPVAELLPILLRDLEPS---LSPFLRGRALDC-ASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQGGFPLRIGACKALKKFCALADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISILRS 561
E+ +++ + WWR E L L + + A+D + V +LL ++ D+ + PFL RA A + +G Q + AA AI S P+++GAC+AL + +++ +M ++ L + Q S ETLHLVL+T S ++S
Sbjct: 148 ESRELKQAGSADWWRLHEASLFALGSLSEHLCEAQDSG--------YNVRDLLEQMVTDIVGTGVHQYPFLHARAFSVVAKFSSLISKGICEQ---------YLCNAAHAIASDVPPPVKVGACRALAELLPESNQSSMPNNIMGILSSLVDLLRQASDETLHLVLETLQSAIKS 305
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: A0A453RBN6_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453RBN6_AEGTS) HSP 1 Score: 54.7 bits (130), Expect = 2.050e-5 Identity = 46/175 (26.29%), Postives = 78/175 (44.57%), Query Frame = 1
Query: 49 EAARAERSQTDGWWRAREGVLHTLCKTVKFMAPAEDGRRKVYAGPRFPVAELLPILLRDLEPS---LSPFLRGRALDC-ASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQGGFPLRIGACKALKKFCALADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISILRS 561
E+ +++ + WWR E L L + + A+D + V +LL ++ D+ + PFL RA A + +G Q + AA AI S P+++GAC+AL + +++ +M ++ L + Q S ETLHLVL+T S ++S
Sbjct: 342 ESRELKQAGSADWWRLHEASLFALGSLSEHLCEAQDSG--------YNVRDLLEQMVTDIVGTGVHQYPFLHARAFSVVAKFSSLISKGICEQ---------YLCNAAHAIASDVPPPVKVGACRALAELLPESNQSSMPNNIMGILSSLVDLLRQASDETLHLVLETLQSAIKS 499
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: A0A446X9C3_TRITD (Uncharacterized protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446X9C3_TRITD) HSP 1 Score: 54.7 bits (130), Expect = 2.090e-5 Identity = 46/175 (26.29%), Postives = 78/175 (44.57%), Query Frame = 1
Query: 49 EAARAERSQTDGWWRAREGVLHTLCKTVKFMAPAEDGRRKVYAGPRFPVAELLPILLRDLEPS---LSPFLRGRALDC-ASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQGGFPLRIGACKALKKFCALADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISILRS 561
E+ +++ + WWR E L L + + A+D + V +LL ++ D+ + PFL RA A + +G Q + AA AI S P+++GAC+AL + +++ +M ++ L + Q S ETLHLVL+T S ++S
Sbjct: 35 ESRELKQAGSADWWRLHEASLFALGSLSEHLCEAQDSG--------YNVRDLLEQMVTDIVGTGVHQYPFLHARAFSVVAKFSSLISKGICEQ---------YLCNAAHAIASDVPPPVKVGACRALAELLPESNQSSMPNNIMGILSSLVDLLRQASDETLHLVLETLQSAIKS 192
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: A0A446X9J5_TRITD (Uncharacterized protein n=3 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446X9J5_TRITD) HSP 1 Score: 54.7 bits (130), Expect = 2.120e-5 Identity = 46/175 (26.29%), Postives = 78/175 (44.57%), Query Frame = 1
Query: 49 EAARAERSQTDGWWRAREGVLHTLCKTVKFMAPAEDGRRKVYAGPRFPVAELLPILLRDLEPS---LSPFLRGRALDC-ASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQGGFPLRIGACKALKKFCALADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISILRS 561
E+ +++ + WWR E L L + + A+D + V +LL ++ D+ + PFL RA A + +G Q + AA AI S P+++GAC+AL + +++ +M ++ L + Q S ETLHLVL+T S ++S
Sbjct: 90 ESRELKQAGSADWWRLHEASLFALGSLSEHLCEAQDSG--------YNVRDLLEQMVTDIVGTGVHQYPFLHARAFSVVAKFSSLISKGICEQ---------YLCNAAHAIASDVPPPVKVGACRALAELLPESNQSSMPNNIMGILSSLVDLLRQASDETLHLVLETLQSAIKS 247
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: A0A446X9E1_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446X9E1_TRITD) HSP 1 Score: 54.7 bits (130), Expect = 2.140e-5 Identity = 46/175 (26.29%), Postives = 78/175 (44.57%), Query Frame = 1
Query: 49 EAARAERSQTDGWWRAREGVLHTLCKTVKFMAPAEDGRRKVYAGPRFPVAELLPILLRDLEPS---LSPFLRGRALDC-ASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQGGFPLRIGACKALKKFCALADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISILRS 561
E+ +++ + WWR E L L + + A+D + V +LL ++ D+ + PFL RA A + +G Q + AA AI S P+++GAC+AL + +++ +M ++ L + Q S ETLHLVL+T S ++S
Sbjct: 304 ESRELKQAGSADWWRLHEASLFALGSLSEHLCEAQDSG--------YNVRDLLEQMVTDIVGTGVHQYPFLHARAFSVVAKFSSLISKGICEQ---------YLCNAAHAIASDVPPPVKVGACRALAELLPESNQSSMPNNIMGILSSLVDLLRQASDETLHLVLETLQSAIKS 461
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Match: A0A453RB64_AEGTS (Importin N-terminal domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453RB64_AEGTS) HSP 1 Score: 54.7 bits (130), Expect = 2.160e-5 Identity = 46/175 (26.29%), Postives = 78/175 (44.57%), Query Frame = 1
Query: 49 EAARAERSQTDGWWRAREGVLHTLCKTVKFMAPAEDGRRKVYAGPRFPVAELLPILLRDLEPS---LSPFLRGRALDC-ASICAQAMEGAAPQVSGQDPRVTFFQVAAEAIGSQGGFPLRIGACKALKKFCALADEGTMRQVASYLVGGLCAFVPQVSAETLHLVLDTFISILRS 561
E+ +++ + WWR E L L + + A+D + V +LL ++ D+ + PFL RA A + +G Q + AA AI S P+++GAC+AL + +++ +M ++ L + Q S ETLHLVL+T S ++S
Sbjct: 394 ESRELKQAGSADWWRLHEASLFALGSLSEHLCEAQDSG--------YNVRDLLEQMVTDIVGTGVHQYPFLHARAFSVVAKFSSLISKGICEQ---------YLCNAAHAIASDVPPPVKVGACRALAELLPESNQSSMPNNIMGILSSLVDLLRQASDETLHLVLETLQSAIKS 551 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113333.2785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113333.2785.1 >prot_M-pyrifera_M_contig113333.2785.1 ID=prot_M-pyrifera_M_contig113333.2785.1|Name=mRNA_M-pyrifera_M_contig113333.2785.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp MAKIITTFQEVIAEGEAARAERSQTDGWWRAREGVLHTLCKTVKFMAPAEback to top mRNA from alignment at M-pyrifera_M_contig113333:8..574- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113333.2785.1 ID=mRNA_M-pyrifera_M_contig113333.2785.1|Name=mRNA_M-pyrifera_M_contig113333.2785.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig113333:8..574- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113333:8..574- >mRNA_M-pyrifera_M_contig113333.2785.1 ID=mRNA_M-pyrifera_M_contig113333.2785.1|Name=mRNA_M-pyrifera_M_contig113333.2785.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig113333:8..574- (Macrocystis pyrifera P11B4 male)back to top |