mRNA_M-pyrifera_M_contig101317.277.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: A0A3D5DC11_9GAMM (MmgE/PrpD family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DC11_9GAMM) HSP 1 Score: 352 bits (902), Expect = 2.170e-117 Identity = 171/220 (77.73%), Postives = 186/220 (84.55%), Query Frame = 1 Query: 7 AALTEIGGTGDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLHTNDGRDINADKITAGLGTRWEMSNIAFKPYP 666 AAL E+GG G FPVIG L LPQRDAAHL GTLIHGLDFDDTH E+VVHTSAS VPTM AGLANDC G AL+A+II +ECASRIGAAARGGFHEKGFHPTGVVGAFG AL+AG+LY LN QL+DAQGIVLS+A GS+QFLDDGAWTKRNHPGWASVC QTA VMAKHG+ GPREPYFGR+GLF HT +G IN K+T LG +WEM NIAFKPYP Sbjct: 65 AALDELGGVGAFPVIGFDLHLPQRDAAHLIGTLIHGLDFDDTHSEAVVHTSASMVPTMLTAGLANDCDGPAALSAFIIGSECASRIGAAARGGFHEKGFHPTGVVGAFGSALSAGYLYGLNRNQLKDAQGIVLSKAAGSMQFLDDGAWTKRNHPGWASVCAQTAVVMAKHGFFGPREPYFGRFGLFSAHTQEGSAINVGKLTDRLGEQWEMLNIAFKPYP 284
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: A0A2E4XR38_9PROT (2-methylcitrate dehydratase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XR38_9PROT) HSP 1 Score: 321 bits (822), Expect = 1.470e-105 Identity = 157/222 (70.72%), Postives = 176/222 (79.28%), Query Frame = 1 Query: 1 LGAALTEIGGTGDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLHTNDGRDINADKITAGLGTRWEMSNIAFKPYP 666 L +ALTEIGGTGD+P+IG LRL QRD+ HLNGTLIHGLD+DDTH +VVHTSASAVPTM AGLA G AL A++IA+E ASRIGAAA GGFH++GFHPTGVVGAFG A+ AG+LY L +QL DAQGIVLSQA SL+FLDDGAWTKRNHP WAS CGQTAA+MAKHGY GPR+PY GRYGLF L+ D + IT GLG W M IAFKPYP Sbjct: 55 LASALTEIGGTGDYPIIGMDLRLSQRDSTHLNGTLIHGLDYDDTHSGAVVHTSASAVPTMLAAGLATGADGRRALGAFLIASEAASRIGAAANGGFHQRGFHPTGVVGAFGSAIGAGYLYGLKGDQLLDAQGIVLSQASASLEFLDDGAWTKRNHPAWASACGQTAAMMAKHGYFGPRKPYEGRYGLFNLYMRDPAMADPSVITEGLGREWSMMGIAFKPYP 276
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: A0A1Z9SLT3_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TMED256 TaxID=1986865 RepID=A0A1Z9SLT3_9PROT) HSP 1 Score: 317 bits (812), Expect = 3.310e-104 Identity = 156/222 (70.27%), Postives = 177/222 (79.73%), Query Frame = 1 Query: 1 LGAALTEIGGTGDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLHTNDGRDINADKITAGLGTRWEMSNIAFKPYP 666 L +AL EIGG GD+P+IG LRL QRDAAHLNGTLIHGLD+DDTH +VVHTSASAVPTM AGLA +G AL A++IA+E ASRIGAAA GGFH++GFHPTGVVGAFG A+ A +LY L +QL DAQGIVLSQA SL+FLDDGAWTKRNHP WASVCGQTAA+MAKHGY GPR+PY GRYGLF L+ D + +T GLG W M +IAFKPYP Sbjct: 44 LASALQEIGGNGDYPIIGMDLRLTQRDAAHLNGTLIHGLDYDDTHSGAVVHTSASAVPTMLSAGLATGATGRQALGAFLIASEAASRIGAAANGGFHQRGFHPTGVVGAFGSAIGASYLYGLKGDQLLDAQGIVLSQAAASLEFLDDGAWTKRNHPAWASVCGQTAAMMAKHGYFGPRKPYEGRYGLFNLYMRDPAMADPRVMTHGLGEAWSMMDIAFKPYP 265
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: A0A2E4GWN5_9PROT (2-methylcitrate dehydratase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4GWN5_9PROT) HSP 1 Score: 313 bits (802), Expect = 1.950e-102 Identity = 154/222 (69.37%), Postives = 174/222 (78.38%), Query Frame = 1 Query: 1 LGAALTEIGGTGDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLHTNDGRDINADKITAGLGTRWEMSNIAFKPYP 666 L +AL EIGG GD+P+IG LRL QRD+AHLNGTLIHGLD+DDTH +VVHTSASAVPTM AGLA G AL A++IA+E ASRIGAAA GGFH++GFHPTGVVGAFG A+ A +LY L +QL DAQGIVLSQA SL+FL+DGAWTKRNHP WAS CGQTAA+MAKHGY GPR+PY GRYGLF L+ D + IT GLG W M IAFKPYP Sbjct: 63 LASALEEIGGRGDYPIIGMDLRLTQRDSAHLNGTLIHGLDYDDTHSGAVVHTSASAVPTMLAAGLATGADGRRALGAFLIASEAASRIGAAANGGFHQRGFHPTGVVGAFGSAIGASYLYGLKGDQLLDAQGIVLSQASASLEFLEDGAWTKRNHPAWASACGQTAAMMAKHGYFGPRKPYEGRYGLFNLYMQDPMMADPSVITNGLGREWAMMGIAFKPYP 284
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: A0A2E4JJQ1_9CHLR (2-methylcitrate dehydratase n=2 Tax=root TaxID=1 RepID=A0A2E4JJQ1_9CHLR) HSP 1 Score: 311 bits (796), Expect = 1.570e-101 Identity = 153/222 (68.92%), Postives = 171/222 (77.03%), Query Frame = 1 Query: 1 LGAALTEIGGTGDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLHTNDGRDINADKITAGLGTRWEMSNIAFKPYP 666 L +AL EIGG GD P+IG + L QRDAAHLNGTLIHGLD+DDTH +VVHTSASA PTM AGLA G AL A++IA+E ASRIGAAA GGFH++GFHPTGVVGAFG L AG+LY L QL DAQGIVLSQA SL+FL+DGAWTKRNHP WASVCGQTAA+MAKHGY GPR+PY GRYGLF L+ D + I GLG +W M IAFKPYP Sbjct: 64 LASALLEIGGEGDHPIIGMDIGLTQRDAAHLNGTLIHGLDYDDTHSRAVVHTSASAFPTMLAAGLATGADGRKALGAFLIASETASRIGAAANGGFHQRGFHPTGVVGAFGSVLGAGYLYGLTGNQLLDAQGIVLSQAAASLEFLEDGAWTKRNHPAWASVCGQTAAIMAKHGYFGPRQPYEGRYGLFNLYMRDPSMADPSAIIDGLGEKWSMXEIAFKPYP 285
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: A0A6A7KSQ5_9PROT (MmgE/PrpD family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KSQ5_9PROT) HSP 1 Score: 271 bits (694), Expect = 4.570e-86 Identity = 133/223 (59.64%), Postives = 158/223 (70.85%), Query Frame = 1 Query: 10 ALTEIGGTGDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLH----TNDGRDINADKITAGLGTRWEMSNIAFKPYP 666 A+ +GG G +P IG LRLP RD+ HLNGTLIHGLDFDDTHG V+H S SA+PT+ A LAN G +ALAAY++A E ++RIG A G FH+ G HPTG+VGAFGC LAAG L DL+ Q+ AQGI LS A GSL+FL DGAWTKR HPGWA VC TAA MAK G++GP++ Y GRYGLF LH D + + T GLG WE+ N+AFKPYP Sbjct: 70 AMHALGGDGAYPAIGLPLRLPLRDSVHLNGTLIHGLDFDDTHGAGVIHASTSAIPTVLGAALANGAGGKEALAAYLVAMEASARIGMAVNGAFHKAGHHPTGLVGAFGCTLAAGRLGDLSEPQIAHAQGIALSMAAGSLEFLSDGAWTKRQHPGWAGVCAITAAGMAKQGFAGPKQAYEGRYGLFKLHLGAHVGGDADYDLEACTKGLGREWELFNVAFKPYP 292
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: A0A661BG41_9GAMM (MmgE/PrpD family protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BG41_9GAMM) HSP 1 Score: 266 bits (681), Expect = 1.390e-84 Identity = 129/211 (61.14%), Postives = 153/211 (72.51%), Query Frame = 1 Query: 34 GDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLHTNDGRDINADKITAGLGTRWEMSNIAFKPYP 666 GD PVIG S +LP RDA +NGTLIHGLD+DDTH S+VHTSASA T AG A CSG D LAAY+IA E +R+G A +G FH+ G HPTG++G FG LAAG L L++ QLRDAQGI LS AGGS++FL DGAWTKR HPGWA VCG TAA +A G+ GP EPY GR+GL+ +H + ++ D TA LG RWEM N+A KPYP Sbjct: 66 GDVPVIGMSEKLPLRDAVLMNGTLIHGLDYDDTHSASIVHTSASATTTALFAGAARGCSGRDVLAAYLIAVEADARLGMAVKGDFHQVGLHPTGLLGTFGATLAAGRLMGLDSNQLRDAQGIALSLAGGSMEFLADGAWTKRMHPGWAGVCGITAAALAHGGFKGPGEPYEGRFGLYRMHLGEDAKVDWDACTAELGQRWEMRNVALKPYP 276
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: A0A7X3YC14_9PROT (MmgE/PrpD family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7X3YC14_9PROT) HSP 1 Score: 253 bits (645), Expect = 9.070e-79 Identity = 125/219 (57.08%), Postives = 150/219 (68.49%), Query Frame = 1 Query: 10 ALTEIGGTGDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLHTNDGRDINADKITAGLGTRWEMSNIAFKPYP 666 A+ + G G PVIG+ +RLP RDAA +NGTLIHGLD+DDTH + VVH S SA+ G A+ +G D LAAY++ E +SRIG AA+GGFH +G HPTG+VGAFG AL A L L+ + AQGI LS A GSL+FL DGAWTKR HPGWA+V G TAA +A G+ GP PY GRYGL+ LH G D D TA LG WE+ N+AFKPYP Sbjct: 69 AMRGLAGEGPSPVIGTDIRLPMRDAALVNGTLIHGLDYDDTHSDGVVHASVSALSAALAQGFASGATGRDLLAAYLVGVEASSRIGQAAQGGFHLRGHHPTGLVGAFGAALTAARLAGLSEREAAMAQGIALSMAAGSLEFLSDGAWTKRIHPGWAAVAGITAAALAGGGFQGPSAPYEGRYGLYNLHLGAGHDARLDMATAALGEVWELENVAFKPYP 287
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: UPI00136F6C5A (MmgE/PrpD family protein n=1 Tax=Achromobacter aestuarii TaxID=2511204 RepID=UPI00136F6C5A) HSP 1 Score: 251 bits (640), Expect = 5.370e-78 Identity = 124/209 (59.33%), Postives = 148/209 (70.81%), Query Frame = 1 Query: 43 PVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLHTND-GRDINADKITAGLGTRWEMSNIAFKPYP 666 PVIG ++ LP RDAA +N +IHGLD+DDTH V+H +AS +P G A D SGAD LAAYI+ AE A RI +AARGGFH+ GFHPTG++GAFGC AAG L LNA+QLRDAQGIVLS A GSL+FL DGAWTKR HPGWA+ G TAA +AKHG+ G R Y GR+GL+ H + + +TAGLG WE N+A KP P Sbjct: 82 PVIGMAVNLPMRDAAIVNAVMIHGLDYDDTHPSGVIHATASVLPAALSVGAARDASGADVLAAYILGAEIAIRIASAARGGFHQVGFHPTGLIGAFGCTFAAGHLMKLNADQLRDAQGIVLSMASGSLEFLQDGAWTKRLHPGWAAHAGITAATLAKHGFVGTRAAYEGRFGLYASHLGELNAKTDLSLVTAGLGEVWETLNVAVKPIP 290
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Match: UPI00190666E8 (MmgE/PrpD family protein n=2 Tax=Paracraurococcus ruber TaxID=77675 RepID=UPI00190666E8) HSP 1 Score: 249 bits (635), Expect = 2.580e-77 Identity = 122/219 (55.71%), Postives = 153/219 (69.86%), Query Frame = 1 Query: 10 ALTEIGGTGDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVHTSASAVPTMFIAGLANDCSGADALAAYIIAAECASRIGAAARGGFHEKGFHPTGVVGAFGCALAAGFLYDLNAEQLRDAQGIVLSQAGGSLQFLDDGAWTKRNHPGWASVCGQTAAVMAKHGYSGPREPYFGRYGLFPLHTNDGRDINADKITAGLGTRWEMSNIAFKPYP 666 A+ + G G+ PVIG ++RLP RDA +NGT IHGLD+DDTH ++VVH SASAVPT A+ +G +ALAAY++ E ++RIGAAA+GGFH+ GFHPTG+VGAFG AL AG L Q++ AQGIVLS A GSL+FL DG+WTKR HPGWA V G TA +A+ G+ GP PY GR+GLF H + + + A LG WEM N+A KPYP Sbjct: 66 AIAGLAGDGEHPVIGLAIRLPLRDAVLVNGTFIHGLDYDDTHSDAVVHASASAVPTALHMARAHRATGLEALAAYVLGVEASARIGAAAQGGFHQVGFHPTGMVGAFGAALTAGRLAGATPRQMQAAQGIVLSMAAGSLEFLADGSWTKRIHPGWAGVAGITATALARGGFKGPPRPYEGRFGLFASHLQERAPADLSRCAAHLGEVWEMRNVALKPYP 284 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101317.277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101317.277.1 >prot_M-pyrifera_M_contig101317.277.1 ID=prot_M-pyrifera_M_contig101317.277.1|Name=mRNA_M-pyrifera_M_contig101317.277.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp LGAALTEIGGTGDFPVIGSSLRLPQRDAAHLNGTLIHGLDFDDTHGESVVback to top mRNA from alignment at M-pyrifera_M_contig101317:5..670+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101317.277.1 ID=mRNA_M-pyrifera_M_contig101317.277.1|Name=mRNA_M-pyrifera_M_contig101317.277.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig101317:5..670+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101317:5..670+ >mRNA_M-pyrifera_M_contig101317.277.1 ID=mRNA_M-pyrifera_M_contig101317.277.1|Name=mRNA_M-pyrifera_M_contig101317.277.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig101317:5..670+ (Macrocystis pyrifera P11B4 male)back to top |