mRNA_M-pyrifera_M_contig113230.2760.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A518BIQ2_9BACT (Polysaccharide biosynthesis protein n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BIQ2_9BACT) HSP 1 Score: 77.4 bits (189), Expect = 5.340e-14 Identity = 57/118 (48.31%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 25 GLAVPHAAWLLETLFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTEGAVAVFAAVALWRAGARSLAH-RPLLWL 375
GLA+P A +LE LF F A SL LL A A +Y G+ LTAV++ GR + I VGAL +NV N +LVP +G +GAA+AT+ TE AVAV A+ A+ A S A RP WL
Sbjct: 324 GLALPLARPILEGLFGEPFGAATASLQWLLGATAAVYAGATLLTAVVSLGRPKFVLMIAVGALALNVVGNGILVPMYGHEGAAIATLGTEIAVAV-ASAAVLAVHAPSFARTRPWAWL 440
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A523PQE4_9BACT (Polysacc_synt_C domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PQE4_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 7.760e-14 Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 55 LETLFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTEGAVAVFAAVALWRAGARSLAHRPLLWL 375
L LF F A +L LL A +Y G+ LTAV+A+GR R + L +N+ N+ LVPR GI+GAA AT+ TE AV + AA+ L R GA L RP WL
Sbjct: 412 LLALFGAGFAAAGDTLRWLLLACLAVYVGATFLTAVVASGRARGVLGVAAAGLAVNLIGNSALVPRMGIEGAAAATLATEIAVVLGAAMVLARVGAHPLRSRPWAWL 518
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A7C8D133_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8D133_9BACT) HSP 1 Score: 76.6 bits (187), Expect = 1.030e-13 Identity = 51/105 (48.57%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 64 LFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTEGAVAVFAAVALWRAGARSLAHRPLL-WL 375
+F F +AA+SL LL A ++Y G+ LTAV+ATGRT I L N+A NA L+P+HG+ GAA+AT +TEG VAV A VAL G L R L WL
Sbjct: 358 IFGAQFTEAASSLRWLLGAATLVYMGANLLTAVVATGRTLAVLAIASLGLATNLAGNAWLLPKHGMQGAAIATFMTEGVVAVGALVALASGGVAGLGGRAALGWL 462
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A845X8N3_9CYAN (Flippase n=1 Tax=Spirulina sp. SIO3F2 TaxID=2607816 RepID=A0A845X8N3_9CYAN) HSP 1 Score: 65.1 bits (157), Expect = 1.070e-9 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 16 VVSGLAVPHAAWLLETLFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTE 294
VV G V +AWL+ T++ F A L LL F + IY+G L +++A + + +T+ A+G+NV LNA L+P + GAA+AT++TE
Sbjct: 288 VVCGAMVLSSAWLVTTIYGTDFQGAIAILQLLSFTLIPIYWGHLATQSLVALDQQKLYLLLTLAAVGLNVGLNAWLIPSYSAQGAAIATIITE 380
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A518EXV0_9BACT (Polysaccharide biosynthesis protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EXV0_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 2.760e-9 Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 4 LGAAVVSGLAVPHAAWLLETLFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTEGAVAVFAAVALWR 333
LGAAV +GLA P +L LF F AA SL+ LL A ++ G+ LTAV+A GR R+ L +NVA NA LVP HG++GAA+AT+ TE + V A +AL R
Sbjct: 299 LGAAV-AGLAFPFREEILG-LFGEEFRVAAPSLAWLLGAAFAVHLGAPLLTAVVAAGRGRSVLVAAAIGLLLNVAGNAWLVPSHGMEGAAIATLATEVWIVVAAFMALVR 406
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A800G0P9_9BACT (Polysacc_synt_C domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G0P9_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 2.830e-9 Identity = 56/125 (44.80%), Postives = 66/125 (52.80%), Query Frame = 1
Query: 4 LGAAVVSGLAVPHAAWLLETLFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTEGAVAVFAAVALWRAGARSLAHRPL-LWL 375
LG VV GL P E SF AA SL L+ +Y G+ LTAV+A+G + I L IN+ N+LLVP GI+GAALAT+VTE V V AA L GAR A R LWL
Sbjct: 306 LGTGVVWGLPEPILGLFGE---GASFTSAAPSLRWLMLGGLAVYAGAPLLTAVVASGSSAAVLRIAAIGLVINLLGNSLLVPSMGIEGAALATLVTEVWVVVGAASTLVNMGARPTAPRQAWLWL 427
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A800N3M5_9BACT (Polysacc_synt_C domain-containing protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800N3M5_9BACT) HSP 1 Score: 62.4 bits (150), Expect = 9.790e-9 Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 64 LFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTEGAVAVFAAVAL 327
LF SF A L LLL A+ ++ G+ TA++A RT + +T+ AL +NVALN+L VP G+ GAA AT++TEG +A+ AA+AL
Sbjct: 358 LFGESFRVAEDPLKLLLLAVICVHAGAPLSTALVAARRTYSVLTLTLSALLLNVALNSLWVPTEGLIGAARATLITEGWIALGAALAL 445
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A6B8W6X9_9CORY (Polysaccharide biosynthesis protein n=1 Tax=Corynebacterium comes TaxID=2675218 RepID=A0A6B8W6X9_9CORY) HSP 1 Score: 61.2 bits (147), Expect = 2.530e-8 Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 10 AAVVSGLAV----PHAAWLLETLFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTE 294
AA++ GLAV P + L+ L+ P F AAT+ +LL+ A+ + ++A+IA + R W+ L +NV LN LL+PR IDGAA+ATV+T+
Sbjct: 318 AAILGGLAVVIFWPSSRALITFLYGPQFAGAATAAALLVAGSALSGLTFVVISALIAAKKLRVFPWLASVGLLLNVGLNLLLIPRWSIDGAAVATVLTQ 416
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A2E6X9V1_9PROT (Polysacc_synt_C domain-containing protein n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E6X9V1_9PROT) HSP 1 Score: 60.1 bits (144), Expect = 6.390e-8 Identity = 39/104 (37.50%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 1 FLGAAVVSGLAVPHAAWLLETLFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTEGAVAVF 312
FLG +V G V A ++E LF P F +A+ +L +L+ + V Y + T ++A + + + V IN+ALN +L+PR GI+GAALAT++T+ A+ +F
Sbjct: 310 FLG-GLVGGFGVLMAPAIIELLFGPEFAEASLALKILMAHIFVFYLTQAYGTPLLAWQFDKGYTTVLVVGAIINIALNIVLIPRIGIEGAALATLITQLAIGLF 412
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Match: A0A0B6TYZ6_9CORY (Polysacc_synt_C domain-containing protein n=1 Tax=Corynebacterium marinum DSM 44953 TaxID=1224162 RepID=A0A0B6TYZ6_9CORY) HSP 1 Score: 58.9 bits (141), Expect = 1.620e-7 Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 10 AAVVSGLAV----PHAAWLLETLFKPSFVDAATSLSLLLFAMAVIYFGSLHLTAVIATGRTRTASWITVGALGINVALNALLVPRHGIDGAALATVVTE 294
AA++ GLAV P + L+ L+ P F AATS +LL+ + A+ + +A+IA + R W+ L +NV LN +L+P IDGAA+AT++TE
Sbjct: 314 AAMLGGLAVVVFWPSSRALITLLYGPQFAGAATSAALLVTSSALAGLTFVVTSALIAARKLRIFPWLAAVGLLLNVGLNLVLIPLWSIDGAAVATLITE 412 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113230.2760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113230.2760.1 >prot_M-pyrifera_M_contig113230.2760.1 ID=prot_M-pyrifera_M_contig113230.2760.1|Name=mRNA_M-pyrifera_M_contig113230.2760.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp FLGAAVVSGLAVPHAAWLLETLFKPSFVDAATSLSLLLFAMAVIYFGSLHback to top mRNA from alignment at M-pyrifera_M_contig113230:159..557- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113230.2760.1 ID=mRNA_M-pyrifera_M_contig113230.2760.1|Name=mRNA_M-pyrifera_M_contig113230.2760.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=399bp|location=Sequence derived from alignment at M-pyrifera_M_contig113230:159..557- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113230:159..557- >mRNA_M-pyrifera_M_contig113230.2760.1 ID=mRNA_M-pyrifera_M_contig113230.2760.1|Name=mRNA_M-pyrifera_M_contig113230.2760.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig113230:159..557- (Macrocystis pyrifera P11B4 male)back to top |