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Homology
BLAST of mRNA_M-pyrifera_M_contig11323.2759.1 vs. uniprot
Match: D7G3Y1_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y1_ECTSI) HSP 1 Score: 166 bits (420), Expect = 2.610e-42 Identity = 198/325 (60.92%), Postives = 220/325 (67.69%), Query Frame = 1
Query: 1 QKASEGRAETQLAGRAGGGEAAEVARTTSAVASASAMSELAGLLHEQGKLTEAEELYRSALDMRTGALGAEHPSVGLSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGPRRPPNCSAIG------------ARGGGVGIAVTARSTASRPTPNPPQASPPIGDVMVDDKAAPKHSP-GSLV-SGRSTFDSNSTIGESGSPLPLREEAGGCHGAAAAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LPAEPGYQLRHHHLGNRDEE-EEKARAEEEKAERDWELAHSVAVASLNNLAVLLSEQG 912
Q ASE +A LAGRAG GE ++ART SAVA ASA SELAGLLHEQGKL EAEELYRSALDMRT ALG EHPSVGLSASXXXXXXXXXXXXXXXXXXXXX +S P P RG VGI VT ++T+SR TPNPP A+PP+GD+++DDKAAPK+SP SLV +G S F S+ +G G + +E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L E ++R G + E EE R EEK+ RDWELAHSVAVASLNNLAVLLSEQG
Sbjct: 2013 QNASEEKAVRVLAGRAGDGEDGDLARTQSAVALASARSELAGLLHEQGKLLEAEELYRSALDMRTAALGVEHPSVGLSASXXXXXXXXXXXXXXXXXXXXXSMNIT--ASPPSLPQQXXXXXXXXXXXXXXPAPGRGDTVGIMVTTKATSSRATPNPPVATPPVGDLLLDDKAAPKNSPLDSLVPAGCSPFGSSGVVG-GGDARAVDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTGNSSGLLVVEQELEIR----GQQQREAEESPRTSEEKSGRDWELAHSVAVASLNNLAVLLSEQG 2330
BLAST of mRNA_M-pyrifera_M_contig11323.2759.1 vs. uniprot
Match: A0A6H5KHL0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL0_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 8.530e-10 Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 1 QKASEGRAETQLAGRAGGGEAAEVARTTSAVASASAMSELAGLLHEQGKLTEAEELYRSAL 183
Q ASE +A +AGRAG GE E+ART SAVA ASA SELAGLLHEQGKL EAEELYR A+
Sbjct: 2623 QNASEEKAVRVIAGRAGDGEDGELARTQSAVALASARSELAGLLHEQGKLLEAEELYRHAM 2683
BLAST of mRNA_M-pyrifera_M_contig11323.2759.1 vs. uniprot
Match: A0A6H5KEH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH7_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 6.520e-6 Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 1
Query: 814 RAEEEKAERDWELAHSVAVASLNNLAVLLSEQG 912
RA EEK+ RDWELAHSVAVASLNN+AVLLSEQG
Sbjct: 75 RASEEKSGRDWELAHSVAVASLNNVAVLLSEQG 107
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 174.9 |
| Seed ortholog evalue | 6e-41 |
| Seed eggNOG ortholog | 2880.D7G3Y1 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | determination of stomach left/right asymmetry |
| EggNOG OGs | COG0457@1,KOG1840@2759 |
| COG Functional cat. | C |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 5 |
| Model size | 936 |
| Cds size | 936 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815647.161879-CDS-M-pyrifera_M_contig11323:402..588 | 1622815647.161879-CDS-M-pyrifera_M_contig11323:402..588 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 403..588 - |
| 1692277503.6644242-CDS-M-pyrifera_M_contig11323:402..588 | 1692277503.6644242-CDS-M-pyrifera_M_contig11323:402..588 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 403..588 - |
| 1622815647.182456-CDS-M-pyrifera_M_contig11323:684..857 | 1622815647.182456-CDS-M-pyrifera_M_contig11323:684..857 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 685..857 - |
| 1692277503.6754391-CDS-M-pyrifera_M_contig11323:684..857 | 1692277503.6754391-CDS-M-pyrifera_M_contig11323:684..857 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 685..857 - |
| 1622815647.1957495-CDS-M-pyrifera_M_contig11323:1790..2099 | 1622815647.1957495-CDS-M-pyrifera_M_contig11323:1790..2099 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 1791..2099 - |
| 1692277503.6852193-CDS-M-pyrifera_M_contig11323:1790..2099 | 1692277503.6852193-CDS-M-pyrifera_M_contig11323:1790..2099 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 1791..2099 - |
| 1622815647.2147543-CDS-M-pyrifera_M_contig11323:2938..3033 | 1622815647.2147543-CDS-M-pyrifera_M_contig11323:2938..3033 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 2939..3033 - |
| 1692277503.6955154-CDS-M-pyrifera_M_contig11323:2938..3033 | 1692277503.6955154-CDS-M-pyrifera_M_contig11323:2938..3033 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 2939..3033 - |
| 1622815647.2288454-CDS-M-pyrifera_M_contig11323:4280..4453 | 1622815647.2288454-CDS-M-pyrifera_M_contig11323:4280..4453 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 4281..4453 - |
| 1692277503.7042823-CDS-M-pyrifera_M_contig11323:4280..4453 | 1692277503.7042823-CDS-M-pyrifera_M_contig11323:4280..4453 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11323 4281..4453 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11323.2759.1 >prot_M-pyrifera_M_contig11323.2759.1 ID=prot_M-pyrifera_M_contig11323.2759.1|Name=mRNA_M-pyrifera_M_contig11323.2759.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=312bp
QKASEGRAETQLAGRAGGGEAAEVARTTSAVASASAMSELAGLLHEQGKL TEAEELYRSALDMRTGALGAEHPSVGLSASNLSGVLRDQGRRAEATLIMR SAMSISVASSGPRRPPNCSAIGARGGGVGIAVTARSTASRPTPNPPQASP PIGDVMVDDKAAPKHSPGSLVSGRSTFDSNSTIGESGSPLPLREEAGGCH GAAAAGAVTAVAVAAAATAAGAGLHAQTANIAAVSANASAVAAASAPLPA EPGYQLRHHHLGNRDEEEEKARAEEEKAERDWELAHSVAVASLNNLAVLL SEQGVYACIRW* back to topmRNA from alignment at M-pyrifera_M_contig11323:403..4453- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig11323.2759.1 ID=mRNA_M-pyrifera_M_contig11323.2759.1|Name=mRNA_M-pyrifera_M_contig11323.2759.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4051bp|location=Sequence derived from alignment at M-pyrifera_M_contig11323:403..4453- (Macrocystis pyrifera P11B4 male) CAGAAGGCCTCCGAAGGCAGAGCGGAAACCCAGCTGGCCGGCAGGGCGGG
GGGCGGGGAGGCCGCGGAGGTCGCCCGCACCACGTCGGCCGTCGCTTCCG
CCTCGGCAATGAGCGAGCTGGCGGGCCTGCTGCACGAACAGGGGAAGCTG
ACGGAGGCAGAAGAGCTCTACCGGTGTGTAGAAGCAGGGAACAGCGTGGG
GTTTCGATTGTAATGGGGACGTTTTTTCCCTCTTCAAGATGGCGCGTGCG
TGACAGGGGATGGGGGGGGGTGAGGAGGTTGTTGAGTGTGATGTGCGAAT
AGGGCAAGCTGACCGAGGCACAAGAGCTCCCTTCCTGTAGGAAGGATCAT
GGGGTTTCCATCGTAGTGGCGTGTGCGTGACGGAGGTGGGAGTGGGGACT
GCTGTGACGTTGTGACGTCGGATTCTGATGAGTTTTTGTTGTATCCTGTG
GAGTGTTTTTTTTGTTTTTTGTGTTTATTTATGTGCTCTCTGTACAGATG
GCGTTGTTTTGTTGTATCGATATTTTTGTCTACTCGTCGATGTTCTCTAT
TAGTACTGTATAGGGTAGTTTTGTTTTATCCAGCAATAGTAAATACCGGT
ATATATACTTGGTGGGTGTTTAGCACTTCTTTTTTTTTTTTTTTTTTTTC
TTCAACGTTTGTTCTAGTTGTTGCTCTGCTAGTGATGGTGTGCGACCGGT
CGTTGGAATAAATAGCATGGAATGGATACAGTGTGCACATCTACTTCGTA
CCAGAACTGTTTTGTTTCGTTTGGTTGTTTGGTTGTTTTCGTTTTTTGTT
TCTGTTTTTTCCAACGTTTTTGGCTTCTTTTTTTTTTTGCTGCCTATGGC
GCTTTCCAACGTTTGCGTGCTTTTTTTACGTTTGTGGTGCTCGTTTGTGG
TGCTTTCATTATTTTGTACCTGGTACTATGCAGCATTATATTGCTGCTGC
CGCTGATAATTCAATGTAAGCATTTGGCTGGATGAGGCCTCCTGCTGCCC
CCGGCAAGTTCGTTCCCAATCCTGGGTCCATGTCGTGAGGTAGCGATGTC
ACGTTCGTGAATCGTCATACGTTTCTAACACTTTTGTTTTGCTTTACCCT
TCTAGCACCTCAGTCCCGTTTTGGGAACAAAGTACTTTGAATTAGAGTAG
TTTGTCCCCAAACCGGGACTGCAGTGCTAGTGGGGTCGAAATGCCCCCCG
CGGCACATTTGCTCCTGATCCTGGGTCCATGTTGGTGGGTCACGATAACT
GCGTGACGTGTGTGGCGCATCACACGTTTCTCTTGACATTTTTTTGTCTT
TTTGCTCAGCTTTTGTGACCAGCCCGTGCGGCCCTGCCCTGCCATGCCCT
GCCCTGCCATGCCCTGCCCTGCCCTGCCCTGCCCCCGCCTTCTGTGTTTG
TGTTGTCGTTTTTTCCATAGGTCGGCCCTCGACATGCGCACTGGAGCGCT
AGGAGCGGAGCACCCAAGCGTTGGTCTGAGCGCCTCGAACCTCTCCGGCG
TCTTGCGTGACCAAGGTGAAAAGCCAAAATCGAAATATCTTCGTTTGTTT
TTTGTGGTTTATTTCGTTTTGATGGGGTTGGATGGGCGGGGGGAGGGCGA
TGGGTATATACACTGTACTGCACTCTGCCTCGTGGCTGCCTGGGGATACT
ACACTCTTACTCCTACCACTACGTCATACGATCACCCCCCTTGTTGCGGA
GTTGAGGTTTTACACAACGCAGAGAATGATGTACAGTAGTATTACTGAAC
TAGTACTGTAGCAGCAGCAGCAGCAGTAGTAGTAGTAGTAGTAGTAGTAG
TGGTAGTGGTAGTGGTAGTGGTGGTGGTAATAGTAGTAAGTAGCAGTAGT
AGTATGAATAGTAGTATAAGTAGTAGTAGTAGTAGTAGTAATGGTAGTAG
CTGTAGGAGGAGGAGGAGGAGGAGGAGTAGTAGTAATAGGAGGAGGAGGA
GGAGGAGTAGGAGTAGGAGCAGCAGCAGCAGCAAGTAGCAGCAGCAGTAG
TAGTGCTACCGTAGCAGTAGCGGTATGATAGCAACCTCTTCCAGCCCCCC
CCGCCCCCCATTTTATCCCCGCCCTCCTCGGTCGGCACTGAACTCCTTCC
CCAGTCGACTGCTACCTTCTAAAACGATAAAAAACGAGTATTCTTTGAAC
CCGTAGCTGACGTACGTACGTGCCGGGTATGATACATTTCCACTCTGCTT
CGCACAGTATCAACCCGAAAAGCGTACGCCTAGCACCTCTACTCGTACAA
CGGTTTCGGCCAGAAACACAACTCAACCAAACACCACTGTACCGGTATTT
TGGTTTGTAACGATTTGTTGAATTGAATCGAACTGAAAAAAAAAAAACAC
GCAGGGAGACGCGCCGAGGCAACCCTCATCATGCGATCCGCCATGAGCAT
CTCCGTCGCCTCCTCGGGGCCCCGCCGACCTCCCAACTGTTCGGCGATCG
GAGCGCGGGGTGGCGGGGTGGGGATCGCCGTTACCGCGAGGTCGACGGCG
TCTCGGCCGACCCCCAACCCGCCCCAGGCGTCTCCCCCAATCGGCGACGT
AATGGTGGACGACAAGGCGGCGCCGAAGCACTCTCCGGGAAGCCTGGTGT
CGGGTCGTTCTACTTTCGACAGCAACAGCACCATTGGTGAGAGCGGCTCC
CCCCTCCCCCTCCGTTCCGCCCTTCCATCTATCCCTTTGTCCCTCCCCCT
ACGTATGCTTTTGTTTTTCGCGATTGCTCGGGCTCGGTGTCGCGTGAATT
TTCTGCTGTTTGTCACCTGATGGCACCATTTGTGAGGGAGGGGCTCCCTC
TCCCACTCCTTCCTTCCGTCCCCCTTTTGGTGTGTTGTGGACTTATAGGA
TTGCACGCTGTTTGTTTTCTGCTCTCGGGAGGACCCAACAGCATCGTTTG
TGAGCGGCTCCCTCTCTGCTTTGCGCTTGGGCTTTGGTCTTGGTCTTAGC
GCTCGCGTGTAGTGTTACTGGTACATGCTGGGTTTTTCTTTGGACAGAGA
ACACCCGAAAAGGCATGTGAAGAGAGGGGGGCGGGGGGGGGGGCGGGGGG
GTTATTTTTGTGCAGGTGTGGTTTGCGCCTGTACGTGAGTTGTACCAGGT
TGTGCTTGCGTGCCTGTGCGTGTATGCGCCTGCATGTGTTGTGTGTTGTA
TGTGCGTGTCTGTTGGTGCATCATTCGTACGTGCCTGGGTGTGGTGTCGC
GTGTGTGCGCGTACGTATGTACGTGCGCATGCGTTCACGGTGTTTGGGGA
CTGCGGGCGCGCGGCGGTGGGGGGTACGTACGTTTCCGGACGGCTGTCGC
GGTAGCTTCCGCTCCCCGTTACCCTATCTTTGTATACGTATCGGCATCGG
TTGCGATATCCACATCCGTTTCGATATTGGTTTTCGGTATCGGTTTCCGT
TTCGATACCCATCCGTTCCGATATCCGCCCATTTCGATTCGATATCTGTC
CGTTCCGATATCCGTCCGTTCCGATATCCGCCCGTTCCGATATCCATCCG
TTCCGATATCCGTCCGTTCCGATATCCATCCGTTTCGATATGCGTCCCGT
TTCGATGTATATGTCGGTTTGCGACGCACGCTCGCGCGCCACTCAGGCGA
GGAGGCGGGCGGGTGCCATGGCGCCGCCGCCGCGGGAGCCGTGACCGCGG
TCGCTGTAGCTGCCGCCGCCACCGCTGCCGGAGCGGGGCTGCACGCGCAG
ACTGCCAACATTGCCGCTGTTTCCGCCAACGCTTCGGCGGTTGCCGCTGC
GTCTGCGCCCTTGCCAGCGGTGGCAGGCGAGAGCGGACACCAGTACCTTC
AGCAGGGCCAGCACCGCCACCATCACCAGCTTCAGCAGCAGCAACAGAAG
CACGATCAAGAGCAGGAGCCGGGGTACCAGCTGAGGCACCACCACCTGGG
GAATAGGGACGAGGAGGAGGAGAAGGCGAGGGCGGAGGAGGAGAAGGCGG
AGAGGGACTGGGAGCTGGCGCACTCGGTGGCCGTCGCGAGCCTCAACAAT
CTCGCCGTACTTCTCAGTGAGCAAGGTGTTTATGCGTGTATTCGATGGTG
A back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig11323:403..4453- >mRNA_M-pyrifera_M_contig11323.2759.1 ID=mRNA_M-pyrifera_M_contig11323.2759.1|Name=mRNA_M-pyrifera_M_contig11323.2759.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1872bp|location=Sequence derived from alignment at M-pyrifera_M_contig11323:403..4453- (Macrocystis pyrifera P11B4 male) CAGAAGGCCTCCGAAGGCAGAGCGGAAACCCAGCTGGCCGGCAGGGCGGG GGGCGGGGAGGCCGCGGAGGTCGCCCGCACCACGTCGGCCGTCGCTTCCG CCTCGGCAATGAGCGAGCTGGCGGGCCTGCTGCACGAACAGGGGAAGCTG ACGGAGGCAGAAGAGCTCTACCGCAGAAGGCCTCCGAAGGCAGAGCGGAA ACCCAGCTGGCCGGCAGGGCGGGGGGCGGGGAGGCCGCGGAGGTCGCCCG CACCACGTCGGCCGTCGCTTCCGCCTCGGCAATGAGCGAGCTGGCGGGCC TGCTGCACGAACAGGGGAAGCTGACGGAGGCAGAAGAGCTCTACCGGTCG GCCCTCGACATGCGCACTGGAGCGCTAGGAGCGGAGCACCCAAGCGTTGG TCTGAGCGCCTCGAACCTCTCCGGCGTCTTGCGTGACCAAGGTCGGCCCT CGACATGCGCACTGGAGCGCTAGGAGCGGAGCACCCAAGCGTTGGTCTGA GCGCCTCGAACCTCTCCGGCGTCTTGCGTGACCAAGGGAGACGCGCCGAG GCAACCCTCATCATGCGATCCGCCATGAGCATCTCCGTCGCCTCCTCGGG GCCCCGCCGACCTCCCAACTGTTCGGCGATCGGAGCGCGGGGTGGCGGGG TGGGGATCGCCGTTACCGCGAGGTCGACGGCGTCTCGGCCGACCCCCAAC CCGCCCCAGGCGTCTCCCCCAATCGGCGACGTAATGGTGGACGACAAGGC GGCGCCGAAGCACTCTCCGGGAAGCCTGGTGTCGGGTCGTTCTACTTTCG ACAGCAACAGCACCATTGGTGAGAGCGGCTCCCCCCTCCCCCTCCGGAGA CGCGCCGAGGCAACCCTCATCATGCGATCCGCCATGAGCATCTCCGTCGC CTCCTCGGGGCCCCGCCGACCTCCCAACTGTTCGGCGATCGGAGCGCGGG GTGGCGGGGTGGGGATCGCCGTTACCGCGAGGTCGACGGCGTCTCGGCCG ACCCCCAACCCGCCCCAGGCGTCTCCCCCAATCGGCGACGTAATGGTGGA CGACAAGGCGGCGCCGAAGCACTCTCCGGGAAGCCTGGTGTCGGGTCGTT CTACTTTCGACAGCAACAGCACCATTGGTGAGAGCGGCTCCCCCCTCCCC CTCCGCGAGGAGGCGGGCGGGTGCCATGGCGCCGCCGCCGCGGGAGCCGT GACCGCGGTCGCTGTAGCTGCCGCCGCCACCGCTGCCGGAGCGGGGCTGC ACGCGCAGACTGCCAACATTGCCGCTGTTTCCGCCAACGCTTCGGCGGTT GCCGCTGCGTCTGCGCCCTTGCCAGCGGCGAGGAGGCGGGCGGGTGCCAT GGCGCCGCCGCCGCGGGAGCCGTGACCGCGGTCGCTGTAGCTGCCGCCGC CACCGCTGCCGGAGCGGGGCTGCACGCGCAGACTGCCAACATTGCCGCTG TTTCCGCCAACGCTTCGGCGGTTGCCGCTGCGTCTGCGCCCTTGCCAGCG GAGCCGGGGTACCAGCTGAGGCACCACCACCTGGGGAATAGGGACGAGGA GGAGGAGAAGGCGAGGGCGGAGGAGGAGAAGGCGGAGAGGGACTGGGAGC TGGCGCACTCGGTGGCCGTCGCGAGCCTCAACAATCTCGCCGTACTTCTC AGTGAGCAAGGTGTTTATGCGTGTATTCGATGGTGAGAGCCGGGGTACCA GCTGAGGCACCACCACCTGGGGAATAGGGACGAGGAGGAGGAGAAGGCGA GGGCGGAGGAGGAGAAGGCGGAGAGGGACTGGGAGCTGGCGCACTCGGTG GCCGTCGCGAGCCTCAACAATCTCGCCGTACTTCTCAGTGAGCAAGGTGT TTATGCGTGTATTCGATGGTGA back to top
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