mRNA_M-pyrifera_M_contig113208.2752.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: A0A3C1NQH5_9GAMM (Aminotran_5 domain-containing protein n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C1NQH5_9GAMM) HSP 1 Score: 311 bits (798), Expect = 4.270e-106 Identity = 156/164 (95.12%), Postives = 161/164 (98.17%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDLATA 492
IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGA+NKAARLAELRSYWVQRAADIPGVEVLTLD EDHAGISAFRL G+RTPAGNRAI+QRLLDR+GVFTVHRTGLAGGACVRVTPAVFTRFAELDRL+IGLKDLATA
Sbjct: 74 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGANNKAARLAELRSYWVQRAADIPGVEVLTLDEPEDHAGISAFRLRGERTPAGNRAIAQRLLDRYGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLVIGLKDLATA 237
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: A0A3C1KQT9_9GAMM (Aminotransferase n=7 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KQT9_9GAMM) HSP 1 Score: 308 bits (789), Expect = 5.570e-102 Identity = 155/164 (94.51%), Postives = 160/164 (97.56%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDLATA 492
IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGA+NKAARLAELRSYWVQRAADIPGVEVLTLD EDHAGISAFRL G+RTPAGNRAI+QRLLDR+GVFTVHRTGLAGGACVRVTPAVFTRFAEL+RLLIGLK LATA
Sbjct: 268 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGANNKAARLAELRSYWVQRAADIPGVEVLTLDEPEDHAGISAFRLRGERTPAGNRAIAQRLLDRYGVFTVHRTGLAGGACVRVTPAVFTRFAELERLLIGLKALATA 431
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: UPI0019D3EED7 (aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3EED7) HSP 1 Score: 260 bits (665), Expect = 3.350e-83 Identity = 125/164 (76.22%), Postives = 149/164 (90.85%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDLATA 492
IGVGVMY+RRERLDAIAPYLGE+ +P+DDIR+RIHTGTSNYAALLSVPDALAFH ++GA NKAARLA LR YWV+RA++IPG+EVLTLD A DHAGI++FRL G+R+ GN AI++RLL+RHGVFTVHRTGLAGGACVRVTPA+FT A+LD LL+GL+++A A
Sbjct: 272 IGVGVMYVRRERLDAIAPYLGEQGLPQDDIRARIHTGTSNYAALLSVPDALAFHAEVGAANKAARLAYLRRYWVERASEIPGIEVLTLDGAGDHAGIASFRLNGERSTEGNVAIARRLLERHGVFTVHRTGLAGGACVRVTPALFTTTADLDALLLGLREIARA 435
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: A0A062VFQ2_9PROT (Class V aminotransferase n=3 Tax=Hyphomonas TaxID=85 RepID=A0A062VFQ2_9PROT) HSP 1 Score: 173 bits (438), Expect = 2.430e-49 Identity = 83/164 (50.61%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDLATA 492
+G G+MYIRR RL+AI+P + E I++R+HTGT+N+A L++ DAL FH +IG +NKAARLA LR+ WV+ IPG+++LT D HAGI++FRL G N+AI + L+DRHG+FT HRTGLA GACVR+TPA++ + RL L + A A
Sbjct: 257 LGAGLMYIRRSRLEAISPDISELPEGVGGIQNRVHTGTTNFATFLTLGDALDFHLEIGPENKAARLAHLRNLWVREVRTIPGLDILTADDPRVHAGITSFRLAGHAGARANQAIVEHLIDRHGIFTTHRTGLARGACVRITPALYNSADDCTRLAAALVETAEA 420
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: A0A7Y7HQB8_9BURK (Selenocysteine lyase/cysteine desulfurase n=1 Tax=Duganella sp. SG902 TaxID=2587016 RepID=A0A7Y7HQB8_9BURK) HSP 1 Score: 171 bits (432), Expect = 1.730e-48 Identity = 79/162 (48.77%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDLA 486
+G G +YIR+ERL AI G+ D DIRSR+H+GT N AAL+++P AL H IG N+ RL LR +WV++ D+P +EVLT D A + +++FR+ G TP N A+ RLL+R+G+FTV R G GGAC+RVTP ++TR A+LD+L+ L+D+A
Sbjct: 256 LGTGFLYIRKERLGAIGVERGDEDYAATDIRSRVHSGTVNSAALMTIPAALKLHADIGVANRGGRLRALRDHWVRQVRDLPNIEVLTPDDAGSYGAVTSFRVRGHTTPEANAALVNRLLERYGIFTVMRRGPVGGACIRVTPGLYTRTADLDKLVTALRDVA 417
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: A0A1E7W777_9BURK (Isopenicillin N epimerase n=2 Tax=Duganella phyllosphaerae TaxID=762836 RepID=A0A1E7W777_9BURK) HSP 1 Score: 169 bits (427), Expect = 9.720e-48 Identity = 90/162 (55.56%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDLA 486
+GVG +YIRR R+ I PY+GERD DDIR+R+HTGT N+AA ++P AL H IG NK ARL LR+ WV A +I GVEVL +GIS+FRL G + A N A+SQRLL H VF V R GLA GACVRVTPA+FT A++DRL++ L+ LA
Sbjct: 260 VGVGAVYIRRGRVGDIDPYMGERD--GDDIRTRVHTGTVNFAAYAALPVALDLHAAIGVANKQARLRRLRNRWVDAAREIGGVEVLAARDPRLGSGISSFRLRGQTSVAQNAALSQRLLREHRVFAVMRDGLASGACVRVTPAIFTSEAQVDRLVVALRALA 419
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: UPI001142870F (aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Ideonella azotifigens TaxID=513160 RepID=UPI001142870F) HSP 1 Score: 167 bits (424), Expect = 2.380e-47 Identity = 86/161 (53.42%), Postives = 111/161 (68.94%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDL 483
+G G +YIR+ L AI PY G+RD P DD+RSRIHTG+ N+AA LS+P AL H++IGA K ARL LR +WVQ+ +PG+E+LT D AGI++ R G + A N+AI L ++HGVFTV R G A G VRVTPA++T AELDRL+ GL+ L
Sbjct: 252 LGCGCLYIRKGSLAAIDPYFGDRDHPADDVRSRIHTGSPNFAAWLSIPAALQLHQRIGASAKQARLRSLRDHWVQQVRGLPGLEILTPDQPGMAAGITSLRFSGRGSAAENQAIVAALHEQHGVFTVWRNGPARGDVVRVTPAIYTSRAELDRLVAGLRAL 412
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: A0A562RJT8_9BURK (Selenocysteine lyase/cysteine desulfurase n=2 Tax=Massilia lurida TaxID=1036180 RepID=A0A562RJT8_9BURK) HSP 1 Score: 168 bits (425), Expect = 3.270e-47 Identity = 88/162 (54.32%), Postives = 113/162 (69.75%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDLA 486
+G+G +YIRR R+ AI PY+GE D DDIR+RIHTGT N+AA LS+P AL H QIG NK ARL LR+ WV A DI GV++L + I++FR+ G + A N A+S+RLL HGVF V R GLA GACVRVTP++FT A++DRL+ GL+ +A
Sbjct: 285 VGIGAIYIRRGRVRAIDPYMGESD--GDDIRTRIHTGTINFAAYLSLPLALQLHEQIGVANKQARLHHLRNRWVDAARDIGGVQLLAAADPRLTSAIASFRVHGQTSVADNAALSRRLLREHGVFAVWRDGLASGACVRVTPSIFTSNAQVDRLVTGLEAVA 444
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: A0A158KYF3_9BURK (Aminotransferase, class V n=1 Tax=Caballeronia choica TaxID=326476 RepID=A0A158KYF3_9BURK) HSP 1 Score: 167 bits (423), Expect = 3.650e-47 Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDLA 486
+G G ++IR + LDAI PYLG+R P DDIRSRIHTG+ N+AA L+VP AL HR+IGA K ARL LR+ WV ++PGVEVLT D AGI+AFRL G ++ A N AI L +R GVFTV R G G VRVTPAVFTR +++RL+ GL LA
Sbjct: 254 LGCGAVHIRLDSLDAIDPYLGDRSWPADDIRSRIHTGSPNFAAWLTVPAALQLHRKIGAHAKEARLRALRNAWVGSVRELPGVEVLTPDDPSMVAGITAFRLHGRKSKADNDAIVGALRERFGVFTVARVGPDSGDVVRVTPAVFTRMQDVERLIEGLGVLA 415
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Match: A0A7X4KCX1_9BURK (Aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Duganella alba TaxID=2666081 RepID=A0A7X4KCX1_9BURK) HSP 1 Score: 166 bits (421), Expect = 7.360e-47 Identity = 75/162 (46.30%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 1 IGVGVMYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRQIGADNKAARLAELRSYWVQRAADIPGVEVLTLDSAEDHAGISAFRLLGDRTPAGNRAISQRLLDRHGVFTVHRTGLAGGACVRVTPAVFTRFAELDRLLIGLKDLA 486
+G G ++IR+ERL I G+ D P DIRSR+H+GT N AAL+++P AL H +IG N+ RL ELR YWV + ++P ++VLT D A + +++FR+ G TP N + RL++++G+FTV R G GGAC+RVTP +FTR ++LD+L+ ++DLA
Sbjct: 256 LGTGFLHIRKERLADIGVERGDEDYPVTDIRSRVHSGTVNAAALMTIPAALKLHEEIGVANRGRRLRELRDYWVHQVRELPNIQVLTPDDAGTYGAVTSFRVRGHTTPEANAVLVNRLVEQYGIFTVMRKGPVGGACIRVTPGLFTRTSDLDKLVTAIRDLA 417 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113208.2752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113208.2752.1 >prot_M-pyrifera_M_contig113208.2752.1 ID=prot_M-pyrifera_M_contig113208.2752.1|Name=mRNA_M-pyrifera_M_contig113208.2752.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp MYIRRERLDAIAPYLGERDVPEDDIRSRIHTGTSNYAALLSVPDALAFHRback to top mRNA from alignment at M-pyrifera_M_contig113208:84..578- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113208.2752.1 ID=mRNA_M-pyrifera_M_contig113208.2752.1|Name=mRNA_M-pyrifera_M_contig113208.2752.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig113208:84..578- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113208:84..578- >mRNA_M-pyrifera_M_contig113208.2752.1 ID=mRNA_M-pyrifera_M_contig113208.2752.1|Name=mRNA_M-pyrifera_M_contig113208.2752.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=960bp|location=Sequence derived from alignment at M-pyrifera_M_contig113208:84..578- (Macrocystis pyrifera P11B4 male)back to top |