mRNA_M-pyrifera_M_contig113191.2746.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113191.2746.1
Unique NamemRNA_M-pyrifera_M_contig113191.2746.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: A0A3D1G869_9BACT (POTRA domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G869_9BACT)

HSP 1 Score: 198 bits (504), Expect = 4.840e-62
Identity = 95/133 (71.43%), Postives = 109/133 (81.95%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKE 399
            +NG D IY+D +GVRLPI+ GK  +LPLVYGF A    DTLK K F QIRDFL+ AKAN+FGW+TISEVAF+ EEGVVALSHENGVK++FG NDF  KL NWEVFY EVI TKGI+ MQQVDLRF NQ+VT+E
Sbjct:   92 VNGPDEIYVDRDGVRLPILPGKIRDLPLVYGFSAIQHSDTLKGKKFEQIRDFLLAAKANKFGWSTISEVAFTKEEGVVALSHENGVKMIFGYNDFPIKLQNWEVFYGEVIATKGIQKMQQVDLRFTNQIVTRE 224          
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: A0A3M8G382_9BACT (FtsQ domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G382_9BACT)

HSP 1 Score: 198 bits (504), Expect = 7.950e-62
Identity = 91/133 (68.42%), Postives = 115/133 (86.47%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKE 399
            ++G +RIY+D  GV+LPI+EGKTL+LPLVYGF A+   DTL+S +F QIR+FL+ A+ANEFGW TISEV +S ++GV+ALSHENGVKL+FG NDF+TKL NW+ FY EV+RTKGI+ +QQVDLRFKNQVVT+E
Sbjct:  108 VDGKERIYVDAYGVKLPILEGKTLDLPLVYGFDASSSSDTLESMEFEQIRNFLLEARANEFGWVTISEVVYSADQGVIALSHENGVKLVFGDNDFETKLRNWKAFYVEVVRTKGIQHIQQVDLRFKNQVVTQE 240          
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: UPI0003710B56 (cell division protein FtsQ/DivIB n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI0003710B56)

HSP 1 Score: 196 bits (497), Expect = 9.450e-61
Identity = 90/134 (67.16%), Postives = 117/134 (87.31%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKEV 402
            INGSDRIY+D EGV+LPI+EGKT ++PL+YG+R T ++DTLKS+ F Q+RDFL+RAK + FGW+TISEVAF   +GVVALSHENGVKL+FG N+F+TKL NW+ FY ++++TKGI+ M+QVDLRF NQVVT+E+
Sbjct:  110 INGSDRIYVDAEGVKLPILEGKTQDVPLLYGYR-TSQRDTLKSESFMQVRDFLMRAKIDGFGWSTISEVAFDETDGVVALSHENGVKLIFGRNNFETKLENWKAFYGQIVKTKGIDQMRQVDLRFTNQVVTREI 242          
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: A0A2D8CFV3_9BACT (POTRA domain-containing protein n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CFV3_9BACT)

HSP 1 Score: 193 bits (491), Expect = 7.670e-60
Identity = 89/134 (66.42%), Postives = 114/134 (85.07%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKEV 402
            +NG++RIY+D EGVRLPI+EGKT ++PL+YG+ A +  DT+K+++F Q+RDFL+RAK + FGW TISEV F   +GVVALSHENGVKLLFG NDF TKL NW+ FY +VIRTKGI+SM+Q+DLRF NQVVT+E+
Sbjct:  110 VNGANRIYVDAEGVRLPILEGKTQDVPLLYGYSA-VSDDTIKTEEFTQVRDFLMRAKIDGFGWNTISEVVFDETDGVVALSHENGVKLLFGRNDFQTKLENWKAFYTDVIRTKGIQSMRQIDLRFTNQVVTREI 242          
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: A0A3D4UW47_9BACT (POTRA domain-containing protein n=4 Tax=unclassified Balneola TaxID=2615059 RepID=A0A3D4UW47_9BACT)

HSP 1 Score: 191 bits (486), Expect = 2.610e-59
Identity = 92/133 (69.17%), Postives = 106/133 (79.70%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKE 399
            I   +R+Y+D EGV+LPI EGKT NLPLVYGF A+   DTLKS+ F QI  FL  A+ N+FGW TISEVA++ EEGVVALS ENGVKLLFG+NDF  KL NWE FY EVIR KGI++MQQVDLRF NQVVT+E
Sbjct:   92 IKDGNRVYVDAEGVKLPIFEGKTFNLPLVYGFNASTNSDTLKSEAFKQISTFLTEARQNKFGWITISEVAYNKEEGVVALSQENGVKLLFGSNDFRIKLENWEAFYTEVIRVKGIQTMQQVDLRFTNQVVTRE 224          
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: A0A3F3ICC4_9BACT (POTRA domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3F3ICC4_9BACT)

HSP 1 Score: 191 bits (486), Expect = 2.610e-59
Identity = 92/133 (69.17%), Postives = 106/133 (79.70%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKE 399
            I   +R+Y+D EGV+LPI EGKT NLPLVYGF A+   DTLKS+ F QI  FL  A+ N+FGW TISEVA++ EEGVVALS ENGVKLLFG+NDF  KL NWE FY EVIR KGI++MQQVDLRF NQVVT+E
Sbjct:   92 IKDGNRVYVDAEGVKLPIFEGKTFNLPLVYGFNASTNSDTLKSEAFKQISTFLTEARQNKFGWITISEVAYNKEEGVVALSQENGVKLLFGSNDFRIKLENWEAFYTEVIRVKGIQTMQQVDLRFTNQVVTRE 224          
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: A0A2D9FR10_9BACT (FtsQ domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D9FR10_9BACT)

HSP 1 Score: 189 bits (481), Expect = 2.520e-58
Identity = 90/134 (67.16%), Postives = 113/134 (84.33%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKEV 402
            INGSDRIY+D EGV+LP++EGKT ++PLVYGFR T + DTLKS+ F Q+RDFL+RAK + FGW TISEVAF   +GV+ALSHENGVKL+FG N+F+ KL NW+ FY +V++TKGI  MQQVDLRF +QVVT+E+
Sbjct:  110 INGSDRIYVDAEGVKLPLLEGKTRDVPLVYGFR-TNQGDTLKSEAFVQVRDFLMRAKIDGFGWNTISEVAFDANDGVIALSHENGVKLIFGRNNFEIKLENWKAFYGQVVKTKGINKMQQVDLRFTDQVVTREI 242          
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: UPI00039BE299 (cell division protein FtsQ/DivIB n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI00039BE299)

HSP 1 Score: 186 bits (471), Expect = 5.080e-57
Identity = 89/133 (66.92%), Postives = 107/133 (80.45%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKE 399
            I+G  R Y+D EGVRLP+++G T +LPL+YGF+A + +DTLKS  F QI  FL+ A+ + FGWATISEVA+  EEGVVALSHENGVKL+FG NDF  KL NW+ FY +VIR KGIESMQQVDLRF NQVVT+E
Sbjct:   93 IDGDKRAYVDAEGVRLPLVDGFTHDLPLLYGFKAEVGRDTLKSSAFKQISSFLMNAQKDHFGWATISEVAYHPEEGVVALSHENGVKLVFGNNDFQIKLENWKAFYTDVIRVKGIESMQQVDLRFINQVVTRE 225          
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: A0A6A8Q764_9BACT (FtsQ-type POTRA domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q764_9BACT)

HSP 1 Score: 185 bits (470), Expect = 6.980e-57
Identity = 89/133 (66.92%), Postives = 108/133 (81.20%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKE 399
            ++GS R Y+D EGV+L II+GKT +LP+VYGF A    DTL S  F QIRDFLV AK N+FGWATISE+A+   +GVVALSHENGVKLLFG N+F+ KL NW+ FY EVIR+KGI+SM+QVDLRF NQVV++E
Sbjct:   92 VDGSHRKYVDAEGVKLNIIDGKTTDLPIVYGFNAQTATDTLHSPAFTQIRDFLVHAKNNKFGWATISEIAYDKVDGVVALSHENGVKLLFGRNNFEIKLENWQAFYTEVIRSKGIKSMRQVDLRFTNQVVSRE 224          
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Match: UPI000CD97EF9 (cell division protein FtsQ/DivIB n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD97EF9)

HSP 1 Score: 185 bits (469), Expect = 1.660e-56
Identity = 88/134 (65.67%), Postives = 111/134 (82.84%), Query Frame = 1
Query:    1 INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIRDFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLTNWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKEV 402
            I+GS R Y+D EGV LPI+E KT ++PL+YG+ +    DTLK + F+Q+RDFL++AK ++FGWATISEVAF   +GVVALSHENGVKLLFG NDF+ KL NW+ FY +V+RTKGI+SMQQVDLRF NQVVT+E+
Sbjct:  110 IDGSQRAYVDAEGVILPILENKTRDVPLLYGY-SVHATDTLKDEPFSQVRDFLMKAKVDQFGWATISEVAFDPVDGVVALSHENGVKLLFGRNDFEMKLENWKAFYKQVVRTKGIQSMQQVDLRFSNQVVTREI 242          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113191.2746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D1G869_9BACT4.840e-6271.43POTRA domain-containing protein n=1 Tax=Balneolace... [more]
A0A3M8G382_9BACT7.950e-6268.42FtsQ domain-containing protein n=1 Tax=Balneola sp... [more]
UPI0003710B569.450e-6167.16cell division protein FtsQ/DivIB n=1 Tax=Gracilimo... [more]
A0A2D8CFV3_9BACT7.670e-6066.42POTRA domain-containing protein n=3 Tax=Balneolace... [more]
A0A3D4UW47_9BACT2.610e-5969.17POTRA domain-containing protein n=4 Tax=unclassifi... [more]
A0A3F3ICC4_9BACT2.610e-5969.17POTRA domain-containing protein n=1 Tax=Balneola s... [more]
A0A2D9FR10_9BACT2.520e-5867.16FtsQ domain-containing protein n=1 Tax=Balneola sp... [more]
UPI00039BE2995.080e-5766.92cell division protein FtsQ/DivIB n=1 Tax=Balneola ... [more]
A0A6A8Q764_9BACT6.980e-5766.92FtsQ-type POTRA domain-containing protein n=1 Tax=... [more]
UPI000CD97EF91.660e-5665.67cell division protein FtsQ/DivIB n=1 Tax=Gracilimo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113191contigM-pyrifera_M_contig113191:168..578 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score197.6
Seed ortholog evalue3.8e-48
Seed eggNOG ortholog1121930.AQXG01000002_gene2338
Preferred nameftsQ
KEGG rclassRC00064,RC00141
KEGG koko:K01921,ko:K03589
KEGG ReactionR01150
KEGG Pathwayko00473,ko00550,ko01100,ko01502,ko04112,map00473,map00550,map01100,map01502,map04112
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
EggNOG OGsCOG1589@1,COG1589@2
EC6.3.2.4
COG Functional cat.D
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01011,ko03036
Exons1
Model size411
Cds size411
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815646.5900457-CDS-M-pyrifera_M_contig113191:167..5781622815646.5900457-CDS-M-pyrifera_M_contig113191:167..578Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113191 168..578 -
1692277503.5008078-CDS-M-pyrifera_M_contig113191:167..5781692277503.5008078-CDS-M-pyrifera_M_contig113191:167..578Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113191 168..578 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113191.2746.1prot_M-pyrifera_M_contig113191.2746.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113191 168..578 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113191.2746.1

>prot_M-pyrifera_M_contig113191.2746.1 ID=prot_M-pyrifera_M_contig113191.2746.1|Name=mRNA_M-pyrifera_M_contig113191.2746.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
INGSDRIYIDIEGVRLPIIEGKTLNLPLVYGFRATIRQDTLKSKDFNQIR
DFLVRAKANEFGWATISEVAFSNEEGVVALSHENGVKLLFGTNDFDTKLT
NWEVFYAEVIRTKGIESMQQVDLRFKNQVVTKEVES*
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mRNA from alignment at M-pyrifera_M_contig113191:168..578-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113191.2746.1 ID=mRNA_M-pyrifera_M_contig113191.2746.1|Name=mRNA_M-pyrifera_M_contig113191.2746.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=411bp|location=Sequence derived from alignment at M-pyrifera_M_contig113191:168..578- (Macrocystis pyrifera P11B4 male)
ATTAATGGATCTGATCGAATATACATAGATATTGAAGGTGTTCGGCTTCC AATAATAGAAGGAAAGACACTGAATCTGCCTTTGGTTTATGGATTCCGAG CTACAATACGCCAAGACACTTTAAAGTCTAAAGACTTTAATCAGATAAGA GATTTTTTAGTTAGAGCAAAAGCAAATGAATTTGGATGGGCAACCATTAG TGAGGTCGCTTTTAGCAATGAAGAAGGAGTAGTAGCATTAAGTCATGAAA ATGGAGTGAAATTGCTTTTTGGAACTAATGATTTCGATACAAAACTCACT AATTGGGAAGTTTTTTATGCCGAGGTAATTCGTACAAAAGGTATCGAGAG CATGCAACAAGTAGATCTTAGATTTAAAAACCAGGTGGTTACGAAGGAGG TGGAGTCGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113191:168..578-

>mRNA_M-pyrifera_M_contig113191.2746.1 ID=mRNA_M-pyrifera_M_contig113191.2746.1|Name=mRNA_M-pyrifera_M_contig113191.2746.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig113191:168..578- (Macrocystis pyrifera P11B4 male)
ATTAATGGATCTGATCGAATATACATAGATATTGAAGGTGTTCGGCTTCC
AATAATAGAAGGAAAGACACTGAATCTGCCTTTGGTTTATGGATTCCGAG
CTACAATACGCCAAGACACTTTAAAGTCTAAAGACTTTAATCAGATAAGA
GATTTTTTAGTTAGAGCAAAAGCAAATGAATTTGGATGGGCAACCATTAG
TGAGGTCGCTTTTAGCAATGAAGAAGGAGTAGTAGCATTAAGTCATGAAA
ATGGAGTGAAATTGCTTTTTGGAACTAATGATTTCGATACAAAACTCACT
AATTGGGAAGTTTTTTATGCCGAGGTAATTCGTACAAAAGGTATCGAGAG
CATGCAACAAGTAGATCTTAGATTTAAAAACCAGGTGGTTACGAAGGAGG
TGGAGTCGTGAATTAATGGATCTGATCGAATATACATAGATATTGAAGGT
GTTCGGCTTCCAATAATAGAAGGAAAGACACTGAATCTGCCTTTGGTTTA
TGGATTCCGAGCTACAATACGCCAAGACACTTTAAAGTCTAAAGACTTTA
ATCAGATAAGAGATTTTTTAGTTAGAGCAAAAGCAAATGAATTTGGATGG
GCAACCATTAGTGAGGTCGCTTTTAGCAATGAAGAAGGAGTAGTAGCATT
AAGTCATGAAAATGGAGTGAAATTGCTTTTTGGAACTAATGATTTCGATA
CAAAACTCACTAATTGGGAAGTTTTTTATGCCGAGGTAATTCGTACAAAA
GGTATCGAGAGCATGCAACAAGTAGATCTTAGATTTAAAAACCAGGTGGT
TACGAAGGAGGTGGAGTCGTGA
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