prot_M-pyrifera_M_contig113130.2742.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113130.2742.1
Unique Nameprot_M-pyrifera_M_contig113130.2742.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length98
Homology
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: A0A7X6AS89_9ACTN (50S ribosomal protein L9 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AS89_9ACTN)

HSP 1 Score: 145 bits (365), Expect = 1.230e-42
Identity = 73/96 (76.04%), Postives = 87/96 (90.62%), Query Frame = 0
Query:    1 RAASVRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVVE 96
            RA ++RNAA+RAEAEEVA++LV  VITIAAKAGEGGRLFGSVG A+I  AVEAQTG V+DRR+L LEHPLKDLGQ+ V+C+LHPEVEFP+TV+V+E
Sbjct:   52 RATAMRNAANRAEAEEVASRLVSEVITIAAKAGEGGRLFGSVGAADISAAVEAQTGAVIDRRTLQLEHPLKDLGQASVICRLHPEVEFPVTVEVIE 147          
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: A0A3M2GVZ8_ACTSX (50S ribosomal protein L9 n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GVZ8_ACTSX)

HSP 1 Score: 124 bits (310), Expect = 2.820e-34
Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 0
Query:    6 RNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVV 95
            RNAA RA+AEEVAT+LVP VITI A AGEGGRLFGSV  A+IVEAV  Q GV +DRR+L L+ PLK+ G+ +VMC+LH EVEFPITV+VV
Sbjct:   57 RNAADRAQAEEVATRLVPQVITIGAHAGEGGRLFGSVTSADIVEAVAEQAGVTLDRRTLRLDGPLKETGRHVVMCRLHAEVEFPITVEVV 146          
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: A0A6B1ATW2_9ACTN (50S ribosomal protein L9 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1ATW2_9ACTN)

HSP 1 Score: 123 bits (308), Expect = 5.670e-34
Identity = 64/96 (66.67%), Postives = 79/96 (82.29%), Query Frame = 0
Query:    1 RAASVRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVVE 96
            RAA +R+A SRAEAEE+A +LVP VIT+ A+AGEGGRLFGSV   +IV+AVEAQ GVV+DR +L L+ PLK+LGQ  V CKL  EVEFP+TV+V+E
Sbjct:   52 RAAVLRDAKSRAEAEEIAARLVPMVITVRARAGEGGRLFGSVSTFDIVDAVEAQAGVVIDRHALALDAPLKELGQVSVNCKLQDEVEFPVTVEVIE 147          
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: A0A2D6U6W9_9ACTN (50S ribosomal protein L9 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U6W9_9ACTN)

HSP 1 Score: 121 bits (304), Expect = 7.950e-34
Identity = 61/96 (63.54%), Postives = 81/96 (84.38%), Query Frame = 0
Query:    1 RAASVRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVVE 96
            RAAS+++AA+RA+AEEVATKLVP   TIAAKAG+GGRLFGSV  A+I   VE++ GV ++ R+L+L+ P+KDLG+ +VMCKLH EV FP+TV+V+E
Sbjct:   16 RAASLKDAATRADAEEVATKLVPMRFTIAAKAGDGGRLFGSVSAADIAAVVESEAGVELEARTLDLDAPIKDLGEHVVMCKLHAEVAFPVTVEVIE 111          
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: A0A2E0T0F0_9ACTN (50S ribosomal protein L9 n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T0F0_9ACTN)

HSP 1 Score: 114 bits (286), Expect = 1.270e-30
Identity = 59/96 (61.46%), Postives = 77/96 (80.21%), Query Frame = 0
Query:    1 RAASVRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVVE 96
            RAAS ++AA+RA+AEEVATKLVP   T AAKAG+GGR FGSV  A+I   VE++ GV ++ R+L+L+ P+KDLG+ +VMCKLH EV FP+TV+V E
Sbjct:   53 RAASXKDAATRADAEEVATKLVPMRFTXAAKAGDGGRXFGSVSAADIXAVVESEXGVELEXRTLDLDAPIKDLGEHVVMCKLHAEVAFPVTVEVXE 148          
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: A0A520XPA5_9ACTN (50S ribosomal protein L9 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XPA5_9ACTN)

HSP 1 Score: 111 bits (277), Expect = 2.940e-29
Identity = 55/94 (58.51%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    1 RAASVRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDV 94
            RA++ +NA SRA+A++VA+ LVP VI I AK  + G LFGSVG A+IV AVE QTGVV+DR++L L+H +K++G  MVM ++HPEVEFPI+V++
Sbjct:   52 RASAAKNAESRADADQVASMLVPQVINITAKVHDEGLLFGSVGAADIVAAVEEQTGVVIDRKALRLDHAIKEVGTHMVMTRIHPEVEFPISVEI 145          
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: UPI001C62C68C (50S ribosomal protein L9 n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C62C68C)

HSP 1 Score: 107 bits (267), Expect = 9.380e-28
Identity = 50/93 (53.76%), Postives = 71/93 (76.34%), Query Frame = 0
Query:    5 VRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVVEA 97
            +++A+ RA AEEVA  LVP+ +T+ AKAG  GRLFGSVG AE+ EA+E QTG+V+DRR L L+ P+K+ G+  +  +LHP V+FP+ ++VV A
Sbjct:   56 IKDASDRASAEEVAKVLVPTTVTVTAKAGTEGRLFGSVGTAEVAEAIEEQTGIVIDRRRLILDEPIKETGEHQLTARLHPAVQFPVRIEVVGA 148          
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: A0A5Q2RSI2_9ACTN (50S ribosomal protein L9 n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RSI2_9ACTN)

HSP 1 Score: 106 bits (265), Expect = 1.890e-27
Identity = 54/95 (56.84%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    1 RAASVRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVV 95
            R+  V++AA+RA A+E+A+ LVP+VITI+AKAG  G+LFGSV  A++ EAV++QTG+ +DRR ++L+ P+K  G   V  KLH EVEFPITV+VV
Sbjct:   52 RSRDVKDAAARAAAQEIASTLVPTVITISAKAGGEGKLFGSVTTADVAEAVQSQTGIEIDRRQIHLDEPIKTTGTHTVPAKLHSEVEFPITVEVV 146          
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: UPI001AA09A13 (50S ribosomal protein L9 n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA09A13)

HSP 1 Score: 103 bits (258), Expect = 2.170e-26
Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 0
Query:    1 RAASVRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVV 95
            R+  +++AA R  AEEVA  LVP+VIT+AAKAG  GRLFGSV  A++VEAV +QTG+ +DR+ L+L+ P+K LG   V  KLH +VEF ITVDV+
Sbjct:   52 RSRDLKDAADRGAAEEVAKVLVPAVITVAAKAGTEGRLFGSVTTADVVEAVASQTGIRLDRKLLHLDEPIKTLGTHSVQAKLHSDVEFAITVDVI 146          
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Match: A0A6G0A7T6_9ACTN (50S ribosomal protein L9 n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A7T6_9ACTN)

HSP 1 Score: 101 bits (251), Expect = 2.480e-25
Identity = 54/95 (56.84%), Postives = 69/95 (72.63%), Query Frame = 0
Query:    1 RAASVRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEAVEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVV 95
            RA   + A  R  AEE+AT+LV +V+TI AKAGEGGRLFGSV  ++I  AV  QTG+ +DRR + LE P+K++G   V  +LH EVEFPITV+VV
Sbjct:   52 RARDQKEARDRGAAEEIATQLVSAVVTIDAKAGEGGRLFGSVTTSDISAAVLDQTGIEIDRRMIALEEPIKNVGSHQVAARLHAEVEFPITVEVV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113130.2742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X6AS89_9ACTN1.230e-4276.0450S ribosomal protein L9 n=1 Tax=Actinomycetia bac... [more]
A0A3M2GVZ8_ACTSX2.820e-3471.1150S ribosomal protein L9 n=1 Tax=Actinomyces sp. T... [more]
A0A6B1ATW2_9ACTN5.670e-3466.6750S ribosomal protein L9 n=1 Tax=Acidimicrobiaceae... [more]
A0A2D6U6W9_9ACTN7.950e-3463.5450S ribosomal protein L9 n=1 Tax=Acidimicrobiaceae... [more]
A0A2E0T0F0_9ACTN1.270e-3061.4650S ribosomal protein L9 n=6 Tax=Acidimicrobiaceae... [more]
A0A520XPA5_9ACTN2.940e-2958.5150S ribosomal protein L9 n=1 Tax=Acidimicrobiales ... [more]
UPI001C62C68C9.380e-2853.7650S ribosomal protein L9 n=1 Tax=Iamia sp. SCSIO 6... [more]
A0A5Q2RSI2_9ACTN1.890e-2756.8450S ribosomal protein L9 n=1 Tax=Actinomarinicola ... [more]
UPI001AA09A132.170e-2657.8950S ribosomal protein L9 n=1 Tax=Rhabdothermincola... [more]
A0A6G0A7T6_9ACTN2.480e-2556.8450S ribosomal protein L9 n=2 Tax=Bacteria TaxID=2 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020069Ribosomal protein L9, C-terminalPFAMPF03948Ribosomal_L9_Ccoord: 12..96
e-value: 7.2E-25
score: 87.3
IPR036791Ribosomal protein L9, C-terminal domain superfamilyGENE3D3.10.430.100coord: 9..97
e-value: 9.5E-25
score: 88.4
IPR036791Ribosomal protein L9, C-terminal domain superfamilySUPERFAMILY55653Ribosomal protein L9 C-domaincoord: 6..96
IPR020594Ribosomal protein L9, bacteria/chloroplastTIGRFAMTIGR00158TIGR00158coord: 6..96
e-value: 2.6E-17
score: 61.6
NoneNo IPR availablePANTHERPTHR21368:SF1839S RIBOSOMAL PROTEIN L9, MITOCHONDRIALcoord: 5..96
IPR000244Ribosomal protein L9PANTHERPTHR2136850S RIBOSOMAL PROTEIN L9coord: 5..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113130contigM-pyrifera_M_contig113130:286..579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113130.2742.1mRNA_M-pyrifera_M_contig113130.2742.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113130 286..579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113130.2742.1 ID=prot_M-pyrifera_M_contig113130.2742.1|Name=mRNA_M-pyrifera_M_contig113130.2742.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp
RAASVRNAASRAEAEEVATKLVPSVITIAAKAGEGGRLFGSVGEAEIVEA
VEAQTGVVVDRRSLNLEHPLKDLGQSMVMCKLHPEVEFPITVDVVEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020069Ribosomal_L9_C
IPR036791Ribosomal_L9_C_sf
IPR020594Ribosomal_L9_bac/chp
IPR000244Ribosomal_L9