prot_M-pyrifera_M_contig11312.2736.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11312.2736.1
Unique Nameprot_M-pyrifera_M_contig11312.2736.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length152
Homology
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: D7FHF7_ECTSI (40S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF7_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 1.120e-83
Identity = 129/142 (90.85%), Postives = 129/142 (90.85%), Query Frame = 0
Query:   10 MKEEVVAEVVSSPEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLKKGSD 151
            MKEEV  E   SPEV EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEY QLVRALCDEG VHLIMVDTR ELGQWAGLCKIG EGEATKIV CSCAVVTDYGEQTQAL VLLEHLKKG D
Sbjct:    1 MKEEVAVEETGSPEV-EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGD 141          
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: A0A835YYB7_9STRA (40S ribosomal protein S12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB7_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.580e-67
Identity = 98/126 (77.78%), Postives = 114/126 (90.48%), Query Frame = 0
Query:   26 EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLKKGSD 151
            +V E+SV DALKEVLKKALIFDGLRRGLHEC KALDRG+ARLCCLAKDC+NPEY +LVRALC+EGGVH+IMV+TR +LGQWAGLCKI  EGEATK+V CSCAVVTD+G ++ AL VL+EHL+KG +
Sbjct:   20 DVAELSVPDALKEVLKKALIFDGLRRGLHECVKALDRGTARLCCLAKDCENPEYTRLVRALCEEGGVHIIMVNTRQQLGQWAGLCKIDAEGEATKVVPCSCAVVTDFGTESPALTVLMEHLRKGGE 145          
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: A0A7S2CVX4_9STRA (40S ribosomal protein S12 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVX4_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.890e-63
Identity = 96/132 (72.73%), Postives = 116/132 (87.88%), Query Frame = 0
Query:   16 AEVVSSPEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLK 147
            AE   + EV EV+E+ VLDALKEVLKKAL+ DGL RGLHECAKALD+ +A+LCCLAKDCDNPEY +LVRALC+EGGV+L+MVDT  +LG+W GLCKI  EGEATK+V+CSCAV+T++GE++QALNVLLE LK
Sbjct:   11 AEAAETEEV-EVEEMGVLDALKEVLKKALVHDGLSRGLHECAKALDKHTAKLCCLAKDCDNPEYTKLVRALCEEGGVNLVMVDTGKQLGEWCGLCKIDEEGEATKVVRCSCAVITEFGEESQALNVLLEFLK 141          
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: A0A7S2CD91_9STRA (40S ribosomal protein S12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CD91_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.800e-62
Identity = 97/138 (70.29%), Postives = 116/138 (84.06%), Query Frame = 0
Query:   11 KEEVVAEVVSSPEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLKK 148
            +EEV+ EV +     EV+E+ VLDALKEVLKKAL+ DGLRRGLHE  KALDR SA+LCCLAKDCDNPEY +LVRALC+EGGV+L+MV+T   LG+W GLCKI   GEA K+V+CSCAVVT++GE+TQALN+LLE LKK
Sbjct:    3 EEEVMDEVAAEEPEVEVEEMGVLDALKEVLKKALVHDGLRRGLHEGVKALDRHSAKLCCLAKDCDNPEYNKLVRALCEEGGVNLVMVETGKTLGEWCGLCKIDENGEAVKVVRCSCAVVTEFGEETQALNILLEFLKK 140          
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: K0T7T2_THAOC (40S ribosomal protein S12 n=2 Tax=Thalassiosira TaxID=35127 RepID=K0T7T2_THAOC)

HSP 1 Score: 177 bits (450), Expect = 1.010e-54
Identity = 87/128 (67.97%), Postives = 106/128 (82.81%), Query Frame = 0
Query:   24 VTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLKKGSD 151
            V EV E++VLDALKEVLKKALI DGLR+GLHECAKALDR SARLCCLAKDC+N EY +L+RALC EG V +IMVD+  +LG W GL K+  +GE  K V+ SCAV+TD+GE+T+AL VLL++L+K SD
Sbjct:   14 VEEVAEMNVLDALKEVLKKALIHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALTVLLDYLQKQSD 141          
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: A0A7S2KYS2_9STRA (40S ribosomal protein S12 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYS2_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.970e-54
Identity = 86/135 (63.70%), Postives = 109/135 (80.74%), Query Frame = 0
Query:   17 EVVSSPEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLKKGSD 151
            E  ++PEV E  E+SVLDALKEVLK+AL+ DGL++GLHECAKALDR SARLCCLAKDC+N EY +L+RAL  EG V LIMVD+  ELG W GL K+   GE  K V+CSCAV+T++GE+++ALNVLL++LK  ++
Sbjct:    5 EAAAAPEVVEEAEMSVLDALKEVLKRALMHDGLKKGLHECAKALDRQSARLCCLAKDCENEEYKKLIRALSAEGKVSLIMVDSGKELGAWCGLAKLDENGEVKKAVRCSCAVITEFGEESRALNVLLDYLKNQTE 139          
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: A0A812WN01_SYMMI (40S ribosomal protein S12 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WN01_SYMMI)

HSP 1 Score: 175 bits (444), Expect = 7.250e-54
Identity = 80/125 (64.00%), Postives = 105/125 (84.00%), Query Frame = 0
Query:   23 EVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLK 147
            EV E  E+ VLDALKEV KKA ++DGLRRG+HECAKALDR +ARLCCLAKDCD+ EY +L++ALCDE GVHLIMVD+  E+G+W GL K+  +G + K+V+ SCAV+T+YGE+T ALNV+L++++
Sbjct:   10 EVVEEGEMGVLDALKEVFKKAALYDGLRRGIHECAKALDRRAARLCCLAKDCDHEEYVRLIQALCDESGVHLIMVDSGKEIGEWCGLAKLNEDGTSRKVVRTSCAVITEYGEETPALNVVLKYVQ 134          
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: A0A7S2LXQ0_9STRA (40S ribosomal protein S12 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LXQ0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.450e-53
Identity = 88/142 (61.97%), Postives = 113/142 (79.58%), Query Frame = 0
Query:   10 MKEEVVAEVVSSPEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLKKGSD 151
            M +E + + V   E  EV E++VLDALKEVLKKAL+ DGLR+GLHECAKALDR SARLCCLAKDC+N EY +L+RALC EG V +IMVD+  +LG W GL K+  +GE  K V+ SCAV+TD+GE+T+AL+VLL++L+K +D
Sbjct:   39 MSDEEIVDAVEEVE-EEVAEMNVLDALKEVLKKALVHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALSVLLDYLQKQAD 179          
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: A0A6T5YAX8_9STRA (40S ribosomal protein S12 n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T5YAX8_9STRA)

HSP 1 Score: 174 bits (440), Expect = 3.680e-53
Identity = 81/131 (61.83%), Postives = 106/131 (80.92%), Query Frame = 0
Query:   21 SPEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLKKGSD 151
            +P V E  E+SVLDALKEVLKK+++ DGLR+GLHECAKALDR +ARLCCLAKDC+N EY +L+RALC EG VH++MV++  ELG W GL K+  +G   K V+ SCAV+TD+GE+T+AL +LL+ L+K +D
Sbjct:   11 APAVVEEVEMSVLDALKEVLKKSMVHDGLRKGLHECAKALDRRAARLCCLAKDCENEEYKKLIRALCAEGEVHVVMVESGKELGAWCGLAKLNDDGSVKKAVRTSCAVITDFGEETRALTILLDFLQKQAD 141          
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Match: A0A8J2SJQ7_9STRA (40S ribosomal protein S12 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJQ7_9STRA)

HSP 1 Score: 174 bits (440), Expect = 4.180e-53
Identity = 91/141 (64.54%), Postives = 111/141 (78.72%), Query Frame = 0
Query:    7 DVEMKEEVVAEVVSSPEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTRLELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLK 147
            D E  EE  A+  +  EV EV E+SVLDAL++VLK+ALI  GL+RGL E AKALD  +A+LCCLAKDCDN EY+ LVRALCDEGGV L+MVD   +LG+WAGLCKI  EGEAT +V+CS A VT++GE T+AL+VLL +LK
Sbjct:    3 DDEPMEEAPADAPAEGEV-EVAEMSVLDALRDVLKRALIHGGLKRGLREVAKALDSRTAKLCCLAKDCDNAEYSNLVRALCDEGGVSLVMVDEGKQLGEWAGLCKINEEGEATSVVRCSAACVTEFGEDTRALSVLLTYLK 142          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11312.2736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF7_ECTSI1.120e-8390.8540S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID... [more]
A0A835YYB7_9STRA2.580e-6777.7840S ribosomal protein S12 n=1 Tax=Tribonema minus ... [more]
A0A7S2CVX4_9STRA4.890e-6372.7340S ribosomal protein S12 n=1 Tax=Florenciella par... [more]
A0A7S2CD91_9STRA1.800e-6270.2940S ribosomal protein S12 n=1 Tax=Dictyocha specul... [more]
K0T7T2_THAOC1.010e-5467.9740S ribosomal protein S12 n=2 Tax=Thalassiosira Ta... [more]
A0A7S2KYS2_9STRA1.970e-5463.7040S ribosomal protein S12 n=1 Tax=Leptocylindrus d... [more]
A0A812WN01_SYMMI7.250e-5464.0040S ribosomal protein S12 n=1 Tax=Symbiodinium mic... [more]
A0A7S2LXQ0_9STRA1.450e-5361.9740S ribosomal protein S12 n=1 Tax=Skeletonema mari... [more]
A0A6T5YAX8_9STRA3.680e-5361.8340S ribosomal protein S12 n=3 Tax=Bacillariophyta ... [more]
A0A8J2SJQ7_9STRA4.180e-5364.5440S ribosomal protein S12 n=1 Tax=Pelagomonas calc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000530Ribosomal protein S12ePRINTSPR00972RIBSOMALS12Ecoord: 94..115
score: 51.65
coord: 119..132
score: 58.44
coord: 39..52
score: 68.18
coord: 53..69
score: 52.94
IPR000530Ribosomal protein S12ePANTHERPTHR1184340S RIBOSOMAL PROTEIN S12coord: 21..148
IPR000530Ribosomal protein S12ePROSITEPS01189RIBOSOMAL_S12Ecoord: 35..53
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 34..128
e-value: 3.6E-22
score: 77.9
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 11..149
e-value: 4.6E-51
score: 173.5
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 32..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11312contigM-pyrifera_M_contig11312:2481..9155 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11312.2736.1mRNA_M-pyrifera_M_contig11312.2736.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11312 2328..9163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11312.2736.1 ID=prot_M-pyrifera_M_contig11312.2736.1|Name=mRNA_M-pyrifera_M_contig11312.2736.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
MTVGTEDVEMKEEVVAEVVSSPEVTEVKEISVLDALKEVLKKALIFDGLR
RGLHECAKALDRGSARLCCLAKDCDNPEYAQLVRALCDEGGVHLIMVDTR
LELGQWAGLCKIGPEGEATKIVKCSCAVVTDYGEQTQALNVLLEHLKKGS
D*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000530Ribosomal_S12e
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like