prot_M-pyrifera_M_contig11310.2731.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11310.2731.1
Unique Nameprot_M-pyrifera_M_contig11310.2731.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length244
Homology
BLAST of mRNA_M-pyrifera_M_contig11310.2731.1 vs. uniprot
Match: D8LF43_ECTSI (RPA_interact_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF43_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 4.900e-48
Identity = 88/138 (63.77%), Postives = 105/138 (76.09%), Query Frame = 0
Query:  109 MADGDD-GWDD---SSDVSEEARLLSPDEYLEMMQYIEGLCREEDLRAEAEVVQEYELTKKMEEEAMESAILSGLDYDENGQQSNAVLCPVCKRDYLLQAGPPSASIVCACGFRLDTADDHLGLEHLRTQLAETYDQH 242
            M D D+ GW D   + D  +E  LLSPDEYLEMMQYIE  C+EED RAEA V+++YELT+++EEE +E A+ S  D + NGQ  +AVLCPVCKRDYLL  GPPSASIVCACGFRLDT  D LGLEH + QLA+TY +H
Sbjct:    1 MVDEDELGWGDGGGAEDDCDEEHLLSPDEYLEMMQYIEEACKEEDFRAEAAVLEDYELTRRLEEEEVEYAVASLDDINGNGQD-DAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEH 137          
BLAST of mRNA_M-pyrifera_M_contig11310.2731.1 vs. uniprot
Match: A0A6H5KTE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE2_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 3.840e-8
Identity = 59/156 (37.82%), Postives = 68/156 (43.59%), Query Frame = 0
Query:   12 SQSQSHLMALEEETA-YLNACPGGRCTGTPQRAAXXXXXXXXXXXXRAGTPASAAGHS--------PFTPGSGDLDGEYQLYAGVAGGQRTPDKGGGVGEEWRPTPMADGDD-GWDD---SSDVSEEARLLSPDEYLEMMQYIEGLCREEDLRAEA 154
            S+S S L A+EEE A YLNAC  G+     QR              R GT A  A  S         F  G+ D D     +                        M D D+ GW D   + D  +E  LLSPDEYLEMMQYIE  C+EEDLRAEA
Sbjct:  170 SESLSFLSAIEEENASYLNACARGQGGSLQQRG------------PRDGTAAELAPMSISFREQTQGFVEGNNDEDDALMAHDDGHAQXXXXXXXXXXXXXXXXXXMVDEDELGWGDGGGAEDCCDEENLLSPDEYLEMMQYIEEACKEEDLRAEA 313          
BLAST of mRNA_M-pyrifera_M_contig11310.2731.1 vs. uniprot
Match: A0A835YX80_9STRA (Replication protein A interacting C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX80_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 7.220e-8
Identity = 44/123 (35.77%), Postives = 58/123 (47.15%), Query Frame = 0
Query:  127 RLLSPDEYLEMMQYIEGLCREEDLRAEAEVVQEYELTKKMEEEAMESAILSGLDY------DENGQQSNAVLCPVCKRDYLLQAGPPSASIVCACGFRLDTADDHLGLEHLRTQLAETYDQHR 243
            R L+P+EY +MM +IE     E  RA+A                      + L        D  G + + VLCPVCK  +LLQ G   A+I+C CGFRL T  + + L  LR  LAE +  HR
Sbjct:    3 RKLTPEEYTDMMLFIEQALAAELARADASXXXXXXXXXXXXXXXXXXXXXAALARAAAEAEDGRGWRDDEVLCPVCKGGWLLQHG---ATIMCTCGFRLQTDGEGMQLGVLRQALAEVFTDHR 122          
BLAST of mRNA_M-pyrifera_M_contig11310.2731.1 vs. uniprot
Match: D8R075_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R075_SELML)

HSP 1 Score: 53.1 bits (126), Expect = 7.980e-5
Identity = 43/140 (30.71%), Postives = 69/140 (49.29%), Query Frame = 0
Query:  111 DGDDGWDDSSDVSEEARLLSPDEYLEMMQYIEGLCRE----EDLRAEAEVVQEYELTKKMEEEAMESAILSGLDYDENGQQSNAVLCPVCKRDYLLQAGPPSASIVCACGFRLDTADDH----LGLEHLRTQLAETYDQH 242
            DGD  W+ SS  S+    LSP EY ++M  ++ +  +    E  +   + +++YE    +E+ ++ S +       E   Q N VLCP+C+R +LL       SI C+    LD         +G+E +R +LAE  DQH
Sbjct:   69 DGDMLWNYSSAGSKSPSELSPQEYEDLMLAMQAVLYQGTYPEQQQHAIDDLEDYEKATALEDSSLASLL-------EQNHQENGVLCPLCRRGFLLDK---ENSIRCSSNGCLDLGSQRDKLKVGVEFVRIRLAELMDQH 198          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11310.2731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF43_ECTSI4.900e-4863.77RPA_interact_C domain-containing protein n=1 Tax=E... [more]
A0A6H5KTE2_9PHAE3.840e-837.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YX80_9STRA7.220e-835.77Replication protein A interacting C-terminal-domai... [more]
D8R075_SELML7.980e-530.71Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028159RPA-interacting protein, C-terminal domainPFAMPF14768RPA_interact_Ccoord: 192..242
e-value: 1.2E-11
score: 45.0
IPR028156RPA-interacting proteinPANTHERPTHR31742FAMILY NOT NAMEDcoord: 127..243
NoneNo IPR availablePRODOMPD472859coord: 146..242
e-value: 4.0E-5
score: 112.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11310contigM-pyrifera_M_contig11310:5193..9660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11310.2731.1mRNA_M-pyrifera_M_contig11310.2731.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11310 5193..9660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11310.2731.1 ID=prot_M-pyrifera_M_contig11310.2731.1|Name=mRNA_M-pyrifera_M_contig11310.2731.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
QEEPWEESKSESQSQSHLMALEEETAYLNACPGGRCTGTPQRAAAAAAAA
TVAGGGRAGTPASAAGHSPFTPGSGDLDGEYQLYAGVAGGQRTPDKGGGV
GEEWRPTPMADGDDGWDDSSDVSEEARLLSPDEYLEMMQYIEGLCREEDL
RAEAEVVQEYELTKKMEEEAMESAILSGLDYDENGQQSNAVLCPVCKRDY
LLQAGPPSASIVCACGFRLDTADDHLGLEHLRTQLAETYDQHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028159RPA_interact_C_dom
IPR028156RIP