prot_M-pyrifera_M_contig113058.2714.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113058.2714.1
Unique Nameprot_M-pyrifera_M_contig113058.2714.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length147
Homology
BLAST of mRNA_M-pyrifera_M_contig113058.2714.1 vs. uniprot
Match: A0A0D2X2Y2_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X2Y2_CAPO3)

HSP 1 Score: 71.2 bits (173), Expect = 1.240e-11
Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 0
Query:    1 VKKLVSPPIIALLASCCISLKPFLRPLLFPPINPDEDSSTPPLSFLLEAIMILANCTVGCTTIVLGANLSKGPM------SSALSARDIVAVGFTKLMFSPFCGLIITEIARNLGIITD-PVMHMVLLIETATSPAMSLVILAGI 138
            ++K ++PPI A + S  I +   +R L FP +     SS+ PL+F+ +A+  ++N  V  TT++LGA LS GPM      S+ L+    VA+   KL   P  G +IT  A    II D P    V+++E+    A++L+++  +
Sbjct:  317 IRKSLNPPIYAAIVSVIIGMISPIRELFFPALG---SSSSAPLNFITDAVHTISNAVVPLTTMMLGAELSSGPMPLSSLRSTTLTYSSAVALVVAKLFIMPVLGTLITLGAHAASIIPDDPAFRFVMMLESCAPSAINLIVMCSL 458          
BLAST of mRNA_M-pyrifera_M_contig113058.2714.1 vs. uniprot
Match: A0A6J1DYW7_MOMCH (protein PIN-LIKES 7-like isoform X2 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1DYW7_MOMCH)

HSP 1 Score: 63.5 bits (153), Expect = 5.640e-9
Identity = 43/148 (29.05%), Postives = 77/148 (52.03%), Query Frame = 0
Query:    1 VKKLVSPPIIALLASCCISLKPFLRPLLFPPINPDEDSSTPPLSFLLEAIMILANCTVGCTTIVLGANLSKGPMSSALSARDIVAVGFTKLMFSPFCGLIITEIARNLGIIT-DPVMHMVLLIETATSPAMSLVILAGIIGSGEAETS 147
            +++L++PP +  +         +LR L+          S  P   + +AI +L + T+ CTT++LG NL++G  SS + A  IV V   +    P  G+ + + A  LG ++ DP+   +L+I+  T PAM++  +  + G G+ E S
Sbjct:  239 IEELMAPPSLGAIVGFIFGSVTWLRHLIV--------GSQAPFRVIQDAIQLLGDGTIPCTTLILGGNLTQGLRSSKVKASTIVGVIAVRYFALPGIGVFVVKGANALGFLSPDPLYQFLLMIQYTTPPAMAISTMTQLFGVGQEECS 378          
BLAST of mRNA_M-pyrifera_M_contig113058.2714.1 vs. uniprot
Match: A0A7I8LFE0_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LFE0_SPIIN)

HSP 1 Score: 56.6 bits (135), Expect = 1.480e-6
Identity = 41/145 (28.28%), Postives = 77/145 (53.10%), Query Frame = 0
Query:    2 KKLVSPPIIALLASCCISLKPFLRPLLFPPINPDEDSSTPPLSFLLEAIMILANCTVGCTTIVLGANLSKGPMSSALSARDIVAVGFTKLMFSPFCGLIITEIARNLGII-TDPVMHMVLLIETATSPAMSLVILAGIIGSGEAE 145
            KK+ +P  I ++    I + P +R LL       ED+   PL  +  +  IL   ++   T+++G NL KG   S + +  I+ V   + +  P  G+ I + A +LG++ +DP+   +L ++ A  PAM++V +  + G+G++E
Sbjct:  254 KKIFAPSTIGVIIGFTIGVIPPIRRLLI-----GEDA---PLRMIEGSASILGEGSIPSITLIMGGNLIKGLYGSDIRSSLIIGVVVVRFIILPIIGVGIVKWAIHLGLVHSDPLYQFILFLQYAVPPAMNIVTITQLFGTGKSE 390          
BLAST of mRNA_M-pyrifera_M_contig113058.2714.1 vs. uniprot
Match: A0A6J1I5J2_CUCMA (protein PIN-LIKES 7-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1I5J2_CUCMA)

HSP 1 Score: 55.1 bits (131), Expect = 5.070e-6
Identity = 38/147 (25.85%), Postives = 74/147 (50.34%), Query Frame = 0
Query:    2 KKLVSPPIIALLASCCISLKPFLRPLLFPPINPDEDSSTPPLSFLLEAIMILANCTVGCTTIVLGANLSKGPMSSALSARDIVAVGFTKLMFSPFCGLIITEIARNLGIIT-DPVMHMVLLIETATSPAMSLVILAGIIGSGEAETS 147
            K+L+ PP +  +         +LR L+           + P   + +++ +L + T+  TT++LGANL++G  +  +   +IVA+   + +  P  G+ + + A  LG +  DP+   VL+++    PAMS+ I+  +   G+ E S
Sbjct:  251 KELMEPPTLGAIIGFIFGAVTWLRHLVV--------GESAPFRVVQDSVKLLGDGTIPSTTLILGANLTRGLRTYRVKPMEIVALIVVRYIALPAIGIAVVKAANALGFLPPDPMYQFVLMVQYTLPPAMSIGIMTQLFDVGQEECS 389          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113058.2714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A0D2X2Y2_CAPO31.240e-1133.10Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
A0A6J1DYW7_MOMCH5.640e-929.05protein PIN-LIKES 7-like isoform X2 n=1 Tax=Momord... [more]
A0A7I8LFE0_SPIIN1.480e-628.28Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A6J1I5J2_CUCMA5.070e-625.85protein PIN-LIKES 7-like n=3 Tax=Cucurbita TaxID=3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004776Membrane transport proteinPFAMPF03547Mem_transcoord: 2..147
e-value: 2.1E-11
score: 42.9
NoneNo IPR availablePANTHERPTHR31651:SF5PROTEIN PIN-LIKES 1coord: 1..146
NoneNo IPR availablePANTHERPTHR31651FAMILY NOT NAMEDcoord: 1..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..139
NoneNo IPR availableTMHMMTMhelixcoord: 49..70
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 120..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113058contigM-pyrifera_M_contig113058:3..571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113058.2714.1mRNA_M-pyrifera_M_contig113058.2714.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113058 3..571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113058.2714.1 ID=prot_M-pyrifera_M_contig113058.2714.1|Name=mRNA_M-pyrifera_M_contig113058.2714.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp
VKKLVSPPIIALLASCCISLKPFLRPLLFPPINPDEDSSTPPLSFLLEAI
MILANCTVGCTTIVLGANLSKGPMSSALSARDIVAVGFTKLMFSPFCGLI
ITEIARNLGIITDPVMHMVLLIETATSPAMSLVILAGIIGSGEAETS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004776Mem_trans